For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRATRGANIALAAALAPLQC YVSVDIEDGYSDEPDAIADYVAQLSTAGINIEDSSAEKLIDPALAAAKIVAIKQRNPEVFVNARVDTYWL RQHADTTSTIQRALRYVDAGADGVFVPLANDPDELAELTRNIPCPVNTLPVPGLTIADLGELGVARVSTG SVPYSAGLYAAAHAARAVSDGEQLPRSVPYAELQARLVDYENRTSTT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1998c | - | - | 100% (258) | hypothetical protein Rv1998c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2021c | - | 1e-146 | 99.61% (258) | hypothetical protein Mb2021c |
| M. gilvum PYR-GCK | Mflv_0391 | - | 6e-23 | 34.23% (222) | hypothetical protein Mflv_0391 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4410c | - | 4e-21 | 33.33% (219) | PEP phosphonomutase and related enzymes |
| M. marinum M | MMAR_0514 | - | 2e-19 | 31.96% (219) | PEP phosphonomutase |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0422 | - | 7e-20 | 32.42% (219) | transferase |
| M. thermoresistible (build 8) | TH_1918 | - | 1e-22 | 34.68% (248) | transferase |
| M. ulcerans Agy99 | MUL_1177 | - | 2e-17 | 31.28% (211) | PEP phosphonomutase |
| M. vanbaalenii PYR-1 | Mvan_0289 | - | 4e-20 | 32.59% (224) | hypothetical protein Mvan_0289 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0391|M.gilvum_PYR-GCK ---MARTEDLKARAEALLALHQPGNPVILPTVWDAWSAHLAVDAGFSALT
Mvan_0289|M.vanbaalenii_PYR-1 ----MTNDVLKARAEALLALHQPGNPVILPTVWDAWSAKLATDAGFAALT
TH_1918|M.thermoresistible__bu ---------LQKRASDFLALHRPGDPVVLPTVWDAWSARLAVDAGFPALT
MMAR_0514|M.marinum_M MPSEQGLNVTAERALALLALHQPGNPVVLPTVWDAWSARLAANAGFAALT
MUL_1177|M.ulcerans_Agy99 ---------------------------MLSTVWDAWSARLAANAGFAALT
MAB_4410c|M.abscessus_ATCC_199 -----MSTDLAAKASLLKSLHVPGDPVFLPTVWDAWSAKLAADAGFAALT
MSMEG_0422|M.smegmatis_MC2_155 -MGNTRSDGLEAKAEALLALHRPGDPGVLPTVWDAWSARLAVDAGFAALT
Rv1998c|M.tuberculosis_H37Rv --------------MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIG
Mb2021c|M.bovis_AF2122/97 --------------MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIG
.*...**. ** **.*:
Mflv_0391|M.gilvum_PYR-GCK VGSHPLADSIGKPDNEGMTFDDVLTRVAQITAAVDVPLSVDIESGYAEEP
Mvan_0289|M.vanbaalenii_PYR-1 VGSHPLADSVGKSDREGMTFDDVLTRVAQITAAVDVPLSVDIESGYAEAP
TH_1918|M.thermoresistible__bu VGSHPVADSLGKADNEGMTFDDVLTRVGQITAAVEVPVSVDIESGYAESP
MMAR_0514|M.marinum_M VGSHPLADSIGKPDNEGMSFDDVLARVTQITAAVDIPVSVDIESGYGLDA
MUL_1177|M.ulcerans_Agy99 VGSHPLADSIGKPDNEGMSFDDVLARVAQITAAVDIPVSVDIESGYGLDA
MAB_4410c|M.abscessus_ATCC_199 VGSHPLADSVGKADAEGMSFDDVVARVSQITAAVDLPVSVDIESGYAQTA
MSMEG_0422|M.smegmatis_MC2_155 VGSHPVADSIGKSDGENMAFEDLLTRVRQITAAVEVPVSVDIESGYGESP
Rv1998c|M.tuberculosis_H37Rv TTSFGVSSSGGHPDGHRATRGANIA-LAAALAPLQCYVSVDIEDGYSDEP
Mb2021c|M.bovis_AF2122/97 TTSFGVSSSGGHPDGHRATRGANIA-LAAALAPLQCYVSVDIEDGYSDEP
. *. ::.* *:.* . : :: : *.:: :*****.**. .
Mflv_0391|M.gilvum_PYR-GCK GRLIDGLLSVDAVGLNIEDTVHSEGGRLRSSGEHAALVGGLRAAADAAGV
Mvan_0289|M.vanbaalenii_PYR-1 TRLIEGLLSVGAVGLNIEDTVHSEGGRLRSSSEHAQLVGALRAAADAAGV
TH_1918|M.thermoresistible__bu ERLITGLLDAGAVGLNIEDTVHSEGRRLRSVAEHAELVGALRAAADAAGV
MMAR_0514|M.marinum_M QRLIEGLLSVGAVGLNIEDTVHSEGARLRSRREHAELVGALRSAADAAGV
MUL_1177|M.ulcerans_Agy99 QRLIEGLLNVGAVGLNIEDTVHSEGARLRSRREHAELVGALRSAADAAGV
MAB_4410c|M.abscessus_ATCC_199 QRLIEGLIEAGAVGLNIEDTVHSEGGRLREPQEHADLVGALRVAADQSGV
MSMEG_0422|M.smegmatis_MC2_155 ERLIEGLLDAGVVGFNLEDTVHKEGKRLRTATEHAELVGQLRAAADAAGV
Rv1998c|M.tuberculosis_H37Rv DAIADYVAQLSTAGINIED---SSAEKLIDP----ALAAAKIVAIKQRNP
Mb2021c|M.bovis_AF2122/97 DAIADYVAQLSTAGINIED---SSAEKLIDP----ALAAAKIVAIKQRNP
: : . ...*:*:** ... :* *.. * . .
Mflv_0391|M.gilvum_PYR-GCK HVVVNARTD-LFLRQDGDEADRVDRAIARLKEAADAGADVLYPVGVHPPE
Mvan_0289|M.vanbaalenii_PYR-1 HVVVNARTD-LFLRQDGDESDRVDRAIARLKEAAAAGADVLYPVGVHPPE
TH_1918|M.thermoresistible__bu HVVVNARTD-LFLRQDGDESDRVDRAIARLTECARAGADVLYPVGRHDPD
MMAR_0514|M.marinum_M HVVLNARTD-LFLRRDGDPADRFERAVARLTEAAAAGADVLYPVGRHDPD
MUL_1177|M.ulcerans_Agy99 HVVLNARTD-LFLRRDGDPADRFERAVAWLTEAAAAGADVLYPVGRHDPD
MAB_4410c|M.abscessus_ATCC_199 PVVINARTD-VLLRQIGEESDRVDRAIARLKLAAEAGADSLYPVGRHDPD
MSMEG_0422|M.smegmatis_MC2_155 HVVINARTD-LFLRNDGDDADRVERAIARMSEAAAAGADSLFPAGLRDPE
Rv1998c|M.tuberculosis_H37Rv EVFVNARVDTYWLRQHADTTSTIQRALR----YVDAGADGVFVPLANDPD
Mb2021c|M.bovis_AF2122/97 EVFVNARVDTYWLRQHADTTSTIQRALR----YVDAGADGVFVPLANDPD
*.:***.* **. .: :. .:**: . **** :: . *:
Mflv_0391|M.gilvum_PYR-GCK VMRRLTSELPLPVNAIARPDQSDPASYGPLGVARISFG------PFWQAA
Mvan_0289|M.vanbaalenii_PYR-1 VMRRLTSELPLPVNAIARPESADPASYGPLGVARISFG------PFWQAA
TH_1918|M.thermoresistible__bu ILRRLATELPLPVNAIAAPDQADPASFGPLGVARISFG------PFFQAA
MMAR_0514|M.marinum_M TLRRLAAQLPLPINAIALPDQDDPASFGRLGVARISFG------PFLQAA
MUL_1177|M.ulcerans_Agy99 TLRRLAAQLPLPINAIALPDQDDPASFGRLGVARISVG------PFLQAG
MAB_4410c|M.abscessus_ATCC_199 VQRRLTSELPLPVNAIAVPDVDDPASFGPLGVGRISFG------PFFQRA
MSMEG_0422|M.smegmatis_MC2_155 GLARFTSAVSLPVSVTVPPEDTDKAALAALGVGRITFG------PFLQWA
Rv1998c|M.tuberculosis_H37Rv ELAELTRNIPCPVNTLPVPG-LTIADLGELGVARVSTGSVPYSAGLYAAA
Mb2021c|M.bovis_AF2122/97 ELAELTRNIPCPVNTLPVPG-LTIADLGELGVARVSTGSVPYSAGLYAAA
.:: :. *:.. * * . ***.*:: * : .
Mflv_0391|M.gilvum_PYR-GCK LAERSK-------------ELLARWR---------
Mvan_0289|M.vanbaalenii_PYR-1 LAERAR-------------EILARWI---------
TH_1918|M.thermoresistible__bu LAVRAG-------------EILARWR---------
MMAR_0514|M.marinum_M LSGRAT-------------ELLARWR---------
MUL_1177|M.ulcerans_Agy99 LSGRAT-------------ELLARWR---------
MAB_4410c|M.abscessus_ATCC_199 LSARAE-------------EILGRWR---------
MSMEG_0422|M.smegmatis_MC2_155 LGAQAK-------------EILGLWA---------
Rv1998c|M.tuberculosis_H37Rv HAARAVSDGEQLPRSVPYAELQARLVDYENRTSTT
Mb2021c|M.bovis_AF2122/97 HAARAVRDGEQLPRSVPYAELQARLVDYENRTSTT
. :: *: .