For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ECSSAVHGQPRTNTFHHHEKLLRHNDEDNHDDP*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1572c | - | - | 100% (34) | hypothetical protein Rv1572c |
| M. tuberculosis H37Rv | Rv3467 | - | 6e-06 | 61.54% (26) | hypothetical protein Rv3467 |
| M. tuberculosis H37Rv | Rv0094c | - | 6e-06 | 61.54% (26) | hypothetical protein Rv0094c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1598A | - | 1e-17 | 100.00% (34) | hypothetical protein Mb1598A |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3121 | - | 2e-05 | 64.00% (25) | hypothetical protein MMAR_3121 |
| M. avium 104 | MAV_2806 | - | 2e-05 | 61.54% (26) | hypothetical protein MAV_2806 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2371 | - | 4e-05 | 60.00% (25) | hypothetical protein MUL_2371 |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3121|M.marinum_M MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVA
MUL_2371|M.ulcerans_Agy99 MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVA
MAV_2806|M.avium_104 MRS--IIGREDIQDDYDVLRAVVARIQRHSYDALTNPERIRLLEVLEYQT
Rv1572c|M.tuberculosis_H37Rv --------------------------------------------------
Mb1598A|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M RRLPVAQYALLNQLDEQAGEAELGGRLAAVVASRLRITRSEAGRRVAEAA
MUL_2371|M.ulcerans_Agy99 RRLPAAQYALVNQLDEQPGEAELGGRLAAVVASRLRITRSEAGRRVAEAA
MAV_2806|M.avium_104 RRLQVPGHQLINQIEQDATPAEIGGKLAHVLADRLLITRAEAARRIDDAR
Rv1572c|M.tuberculosis_H37Rv --------------------------------------------------
Mb1598A|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M DVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRRLPAGVDV
MUL_2371|M.ulcerans_Agy99 EVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRQLPAGVDV
MAV_2806|M.avium_104 DLGVRRTLTGEPLPPRYAATAAAQRDGRIGASHVAVIRRFFDQLPCWVDA
Rv1572c|M.tuberculosis_H37Rv --------------------------------------------------
Mb1598A|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M GTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDGRHSDEDRARRRGL
MUL_2371|M.ulcerans_Agy99 GTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDGRHSDEDRARRRGL
MAV_2806|M.avium_104 PTRDAAEADLARWAGEHRPESLRKVADRIACYFNPDGVFHDEDRLRHRGL
Rv1572c|M.tuberculosis_H37Rv --------------------------------------------------
Mb1598A|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M SLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAAVVDGP
MUL_2371|M.ulcerans_Agy99 SLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAAVVDGP
MAV_2806|M.avium_104 TLGAQQPDGMSQLRGWLTPEARATVEAVLAKLAAPGMCNPDDDAPVVDGP
Rv1572c|M.tuberculosis_H37Rv --------------------------------------------------
Mb1598A|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M VSPDAADRDSRSVGQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTL
MUL_2371|M.ulcerans_Agy99 VSRDAADRDSRSVSQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTL
MAV_2806|M.avium_104 PPEAASQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTL
Rv1572c|M.tuberculosis_H37Rv --------------------------------------------------
Mb1598A|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M KELEAAAGRGLTGGGTLLPMSDVIRLARHAHHYLAVFDRGEAIGLYHAKR
MUL_2371|M.ulcerans_Agy99 KELEAAAGRGLTGGGTLLPMSDVIRLARHAHHYLAVFDRGEAIGLYHAKR
MAV_2806|M.avium_104 RDLESAAGKGLTAGGTLLPMSEVIRLARHAHHYLAVFDNGKPLALYHTKR
Rv1572c|M.tuberculosis_H37Rv --------------------------------------------------
Mb1598A|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M LATPGQRIVLYAKDRGCTRPGCDVAGYQCEVHHVAAWAISGRTDINQLTL
MUL_2371|M.ulcerans_Agy99 LATPGQRIVLYAKDRGCTRPGCDVAGYQCEVHHVAAWAISGRTDINQLTL
MAV_2806|M.avium_104 LASPGQRIVLYAKDRGCSHPGCDVSGYYCEVHHVTGYAKCGRTDIDQLTF
Rv1572c|M.tuberculosis_H37Rv -------------------------------------------------M
Mb1598A|M.bovis_AF2122/97 -------------------------------------------------M
:
MMAR_3121|M.marinum_M ACGPDHKLLEQGWRTRKNAHGDTEWLPPPHLDHGQPRTNTYHHPEKLLRD
MUL_2371|M.ulcerans_Agy99 ACGPDHKLLEQGWRTRKNAHGDTEWLPPPHLDHGQPRTNSYHHPEKLLRD
MAV_2806|M.avium_104 ACGGHHPLAEQGWITRKNGRGETEWIPPPHLDHGRPRTNAFHHPEKLVAD
Rv1572c|M.tuberculosis_H37Rv ECS--------------------------SAVHGQPRTNTFHHHEKLLRH
Mb1598A|M.bovis_AF2122/97 ECS--------------------------SAVHGQPRTNTFHHHEKLLRH
*. **:****::** ***: .
MMAR_3121|M.marinum_M SADDDDEGHGAA---------
MUL_2371|M.ulcerans_Agy99 SADDDDEGHGAA---------
MAV_2806|M.avium_104 SDNDTGDDTSDAPDDPQPPIP
Rv1572c|M.tuberculosis_H37Rv NDEDNHDDP------------
Mb1598A|M.bovis_AF2122/97 NDEDNHDDP------------
. :* :.