For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNVRGRVAPRRVTGRAMSTLLAYLALTKPRVIELLLVTAIPAMLLADRGAIHPLLMLNTLVGGMMAAAGA NTLNCVADADIDKVMKRTARRPLAREAVPTRNALALGLTLTVISFFWLWCATNLLAGVLALVTVAFYVFV YTLWLKRRTSQNVVWGGAAGCMPVMIGWSAITGTIAWPALAMFAIIFFWTPPHTWALAMRYKQDYQVAGV PMLPAVATERQVTKQILIYTWLTVAATLVLALATSWLYGAVALVAGGWFLTMAHQLYAGVRAGEPVRPLR LFLQSNNYLAVVFCALAVDSVIALPTLH
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1451 | ctaB | - | 100% (308) | protoheme IX farnesyltransferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1486 | ctaB | 1e-176 | 99.68% (308) | protoheme IX farnesyltransferase |
M. gilvum PYR-GCK | Mflv_3691 | - | 1e-132 | 78.47% (288) | protoheme IX farnesyltransferase |
M. leprae Br4923 | MLBr_00584 | ctaB | 1e-143 | 83.06% (307) | protoheme IX farnesyltransferase |
M. abscessus ATCC 19977 | MAB_2758c | - | 1e-132 | 75.00% (304) | protoheme IX farnesyltransferase |
M. marinum M | MMAR_2255 | ctaB | 1e-149 | 81.06% (322) | cytochrome C oxidase assembly factor CtaB |
M. avium 104 | MAV_3326 | cyoE | 1e-142 | 84.38% (288) | protoheme IX farnesyltransferase |
M. smegmatis MC2 155 | MSMEG_3105 | cyoE | 1e-144 | 80.78% (307) | protoheme IX farnesyltransferase |
M. thermoresistible (build 8) | TH_0340 | ctaB | 1e-123 | 76.17% (277) | PROBABLE CYTOCHROME C OXIDASE ASSEMBLY FACTOR CTAB |
M. ulcerans Agy99 | MUL_1845 | ctaB | 1e-148 | 80.75% (322) | protoheme IX farnesyltransferase |
M. vanbaalenii PYR-1 | Mvan_2721 | - | 1e-136 | 80.20% (293) | protoheme IX farnesyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3691|M.gilvum_PYR-GCK MRIREGHLINDSAEG------------PIGLRTRLMGYIGLTKPRVIELL Mvan_2721|M.vanbaalenii_PYR-1 MRIREGHLVGDVAGG------------PIRFRDRVLGYIGLTKPRVIELL TH_0340|M.thermoresistible__bu ---------------------------------------------VIELL MSMEG_3105|M.smegmatis_MC2_155 MSIRERRLISWTPR---------------RIRTTFLAYLALTKPRVIELL Rv1451|M.tuberculosis_H37Rv MNVRGRVAPRRVTG---------------RAMSTLLAYLALTKPRVIELL Mb1486|M.bovis_AF2122/97 MNVRGRVAPRRVTG---------------RAMSTLLAYLALTKPRVIELL MMAR_2255|M.marinum_M MSVHGRVAPGQVAGTARQRSEPGTGTWRSRVLGTVLAYLALTKPRVIELL MUL_1845|M.ulcerans_Agy99 MSVHGRVAPGQVAGTARQRSEPGTGTWRSRVLGTVLAYLALTKPRVIELL MLBr_00584|M.leprae_Br4923 --MRSTIVRSRSCALLRSRGVKYVSVRARLARSRVLAYLALTKPRVIELL MAV_3326|M.avium_104 ----------------------------------MLAYLALTKPRVIELL MAB_2758c|M.abscessus_ATCC_199 MRMRETQGAQGRGRN------------APPFLRTILAYIALTKPRVIELL ***** Mflv_3691|M.gilvum_PYR-GCK LVTTIPAMLLADRGTVDPLLIINTLVGGLLAAAGANTLNCVADADIDKKM Mvan_2721|M.vanbaalenii_PYR-1 LVTTIPAMLLADRGTVDPLLILNTLVGGLLAAAGANTLNCVADADIDKKM TH_0340|M.thermoresistible__bu LVTTIPAMLLAGRGTVDPVLIFNTLIGGMFAAGGANALNCVADADIDKVM MSMEG_3105|M.smegmatis_MC2_155 LVTTIPAMLLADRGTVDPLLILNTLVGGMLAAAGANTLNCVADADIDKVM Rv1451|M.tuberculosis_H37Rv LVTAIPAMLLADRGAIHPLLMLNTLVGGMMAAAGANTLNCVADADIDKVM Mb1486|M.bovis_AF2122/97 LVTAIPAMLLADRGAIHPLLMLNTLVGGMMAATGANTLNCVADADIDKVM MMAR_2255|M.marinum_M LVTAIPAMLLADRGAVHPLIIANTLIGGMMAAAGANTLNCVADADIDKVM MUL_1845|M.ulcerans_Agy99 LVTAIPAMLLADRGAVHPLIIANTLIGGMMAAAGANTLNCVADADIDKVM MLBr_00584|M.leprae_Br4923 LVTAIPAMLLADRGSANPLLILNTLLGGISAAAGANTFNCVADADIDKLM MAV_3326|M.avium_104 LVTAIPAMLLAQRGTVNPLLIVNTLIGGMLAAGGANALNCVADADIDKVM MAB_2758c|M.abscessus_ATCC_199 LVTTIPAMLLADRGDVNPLLILNTLLGGVMAAASANTLNCVADADIDKVM ***:******* ** .*::: ***:**: ** .**::********** * Mflv_3691|M.gilvum_PYR-GCK KRTERRALARATVPRSHALIFGLTLSVASFFWLWSTTNMLSAHLAGATIA Mvan_2721|M.vanbaalenii_PYR-1 KRTERRALARATVPRSHALIFGLALSVLSFFWLWWTTNMLSAHLAGATIA TH_0340|M.thermoresistible__bu KRTERRPLARDTVPRSHALVFGLALSVISFFYLWWTTNLLSAHLAGLTIA MSMEG_3105|M.smegmatis_MC2_155 KRTARRPLARATVPTRHALIFGLVLTVTSFCWLWLSTNLLSGLLAVATIA Rv1451|M.tuberculosis_H37Rv KRTARRPLAREAVPTRNALALGLTLTVISFFWLWCATNLLAGVLALVTVA Mb1486|M.bovis_AF2122/97 KRTARRPLAREAVPTRNALALGLTLTVISFFWLWCATNLLAGVLALVTVA MMAR_2255|M.marinum_M KRTARRPLARAAVPTRSALIFGLALTVISFFWLWLSANLLSGLLALATVA MUL_1845|M.ulcerans_Agy99 NRTARRPLARAAVPTRSALIFGLALTVISFFWLWLSANLLSGLLALATVA MLBr_00584|M.leprae_Br4923 KRTSRRPLARAAVPPRNALVLGLALTAGSFFWLWWTTNLLSGLLALATVA MAV_3326|M.avium_104 KRTARRPLARAAVPTRNALVFGLVLTAGSFLWLWWTTNLLSGLLALATIA MAB_2758c|M.abscessus_ATCC_199 KRTARRPLAMSSVTTRNALIFGVVLGVGAFAWLWWTANLLSGLLAVATIA :** **.** :*. ** :*:.* . :* :** ::*:*:. ** *:* Mflv_3691|M.gilvum_PYR-GCK FYVLVYTLLLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTIQWPALVMFLI Mvan_2721|M.vanbaalenii_PYR-1 FYVLIYTLVLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTIQWPALVMFLI TH_0340|M.thermoresistible__bu FYVLIYTLVLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTIEWPALVMFLV MSMEG_3105|M.smegmatis_MC2_155 FYVFVYTMLLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTIQWPALVMFLI Rv1451|M.tuberculosis_H37Rv FYVFVYTLWLKRRTSQNVVWGGAAGCMPVMIGWSAITGTIAWPALAMFAI Mb1486|M.bovis_AF2122/97 FYVFVYTLWLKRRTSQNVVWGGAAGCMPVMIGWSAITGTIAWPALAMFAI MMAR_2255|M.marinum_M FYVFIYTLLLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTLAWPALAMFAI MUL_1845|M.ulcerans_Agy99 FYVFIYTLLLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTLAWPALAMFAI MLBr_00584|M.leprae_Br4923 FYVFVYTLLLKRRTSQNVVWGGAAGCMPVMIGWSAITDTIGWPALAMFAI MAV_3326|M.avium_104 FYVFIYTLLLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTIQWPALVMFAI MAB_2758c|M.abscessus_ATCC_199 FYVFVYTLVLKRRTAQNVVWGGAAGCMPVMIGWSAVTNTIQWPALVMFAV ***::**: *****:********************:*.*: ****.** : Mflv_3691|M.gilvum_PYR-GCK IFFWTPPHTWALAMRYKEDYEAAGVPMLPVVATEQQVTKQILVYTWLTVL Mvan_2721|M.vanbaalenii_PYR-1 IFFWTPPHTWALAMRYKEDYEAAGVPMLPVVATERQVTKQILIYTWLTVA TH_0340|M.thermoresistible__bu IFFWTPPHTWALAMKYKDDYVAAGVPMLPAVATERRVTVHILVYTWLTVL MSMEG_3105|M.smegmatis_MC2_155 IFFWTPPHTWALAMRYKDDYKAAGVPMLPAVATERQVTRQILIYTWLTVL Rv1451|M.tuberculosis_H37Rv IFFWTPPHTWALAMRYKQDYQVAGVPMLPAVATERQVTKQILIYTWLTVA Mb1486|M.bovis_AF2122/97 IFFWTPPHTWALAMRYKQDYQVAGVPMLPAVATERQVTKQILIYTWLTVA MMAR_2255|M.marinum_M IFFWTPPHTWALAMRYKDDYKEAGVPMLPAVATERQVTKQILIYTWLTVL MUL_1845|M.ulcerans_Agy99 IFFWTPPHTWALAMRYKDDYKEAGVPMLPAVATERQVTKQILIYTWLTVL MLBr_00584|M.leprae_Br4923 IFFWTPPHTWALAMRYKDDYKVASVPMLPAVATERHVTKQILIYTWLTAL MAV_3326|M.avium_104 IFFWTPPHTWALAMRYKDDYKAAGVPMLPAVATERQVTKQILVYTWLTVL MAB_2758c|M.abscessus_ATCC_199 IFFWTPPHTWALAMRYKEDYRAAGVPMLPVIATEEKVTKLILVYTWLTVL **************:**:** *.*****.:***.:** **:*****. Mflv_3691|M.gilvum_PYR-GCK ATLALALTTGWLYASVAILAGTWFLVMAHQLYAGVKRGEAVKPLRLFLQS Mvan_2721|M.vanbaalenii_PYR-1 ATLALALATGWLYAAVAIVAGTWFLAMAHQLYAGVRRGEPVKPLRLFLQS TH_0340|M.thermoresistible__bu STLALAPVTGWLYNSVALLAGAWFLIMAHQLYTGVRRGEPVKPLRLFLQS MSMEG_3105|M.smegmatis_MC2_155 TTLVLALATGWLYGAVALLAGAWFLVMAHQLYSGVKRGEPVKPLRLFLQS Rv1451|M.tuberculosis_H37Rv ATLVLALATSWLYGAVALVAGGWFLTMAHQLYAGVRAGEPVRPLRLFLQS Mb1486|M.bovis_AF2122/97 ATLVLALATSWLYGAVALVAGGWFLTMAHQLYAGVRAGEPVRPLRLFLQS MMAR_2255|M.marinum_M ATLALTPAAGWLYAAVAAVAGAWFLTMAHQLYAGVRAGEAVKPLRLFLQS MUL_1845|M.ulcerans_Agy99 ATLALTPAAGWLYAAVAAVAGAWFLTMAHQLYAGVRAGEAVKPLRLFLQS MLBr_00584|M.leprae_Br4923 STLVLALATGWLYMAVAVVAGAWFLTMAHQLYVGVCAGEPVKPLRLFLQS MAV_3326|M.avium_104 ATLALALATGWLYAAVAVVAGVWFLAMAHQLYAGVRAGEPVKPLRLFLQS MAB_2758c|M.abscessus_ATCC_199 STLALALAAGVIYAVVAFLAGVWFLAMAHQLYSGVRKGQPIRPLRLFLQS :**.*: .:. :* ** :** *** ****** ** *:.::******** Mflv_3691|M.gilvum_PYR-GCK NNYLAVVFVALAVDSALALPTLLHV Mvan_2721|M.vanbaalenii_PYR-1 NNYLAVVFCALAVDSALALPTLFSV TH_0340|M.thermoresistible__bu NNYLAVVFLALAIDSVLDLPTVL-- MSMEG_3105|M.smegmatis_MC2_155 NNYLAVVFCALAIDSALALPTLL-- Rv1451|M.tuberculosis_H37Rv NNYLAVVFCALAVDSVIALPTLH-- Mb1486|M.bovis_AF2122/97 NNYLAVVFCALAVDSVIALPTLH-- MMAR_2255|M.marinum_M NNYLALVFCALAVDSAIGLPTLLG- MUL_1845|M.ulcerans_Agy99 NNYLALVFCALAVDSAIGLPTLLG- MLBr_00584|M.leprae_Br4923 NNYLAVVFCALAVDSVLALPTLF-- MAV_3326|M.avium_104 NNYLAVVFCALAIDSAIGLPHLF-- MAB_2758c|M.abscessus_ATCC_199 NNYLAVVFCALAVDSVVGWPTLFQL *****:** ***:**.: * :