For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLFYVAKILLYVLVGWLIVLTTKGIDG FTDAAAWYAEPIVFEKVVLYTMLFEVIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPWTRG TKRKPVDVALYALLVMMLLSALFTDGAGPIPELGTTVGLLPAWQIVLILLLLGVLGLRDKVIFLAARGEV YATLTVTFLFGRLNGIDMIVAAKLVFLVIWIGAATSKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFP GDLRPGLLSRIVAHVSTVIEMCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVFMIFGV LSLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFLAAMRYYAGNWDTTLWCIKPSAEDKI NRGIVAIASMPAAQLERFYGKDRAQIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDYVITDGERVCS TAVGWNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYRLVDAATGEFERGYVRVADMV NRQPWDDDVPVHVLPG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1132 | - | - | 100% (576) | hypothetical protein Rv1132 |
M. tuberculosis H37Rv | Rv1431 | - | e-150 | 47.95% (586) | hypothetical protein Rv1431 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1163 | - | 0.0 | 99.83% (576) | hypothetical protein Mb1163 |
M. gilvum PYR-GCK | Mflv_2113 | - | 0.0 | 72.82% (574) | hypothetical protein Mflv_2113 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4552 | - | 0.0 | 72.87% (575) | hypothetical protein MAB_4552 |
M. marinum M | MMAR_4329 | - | 0.0 | 84.29% (573) | hypothetical protein MMAR_4329 |
M. avium 104 | MAV_1261 | - | 0.0 | 78.61% (575) | hypothetical protein MAV_1261 |
M. smegmatis MC2 155 | MSMEG_5202 | - | 0.0 | 72.43% (573) | hypothetical protein MSMEG_5202 |
M. thermoresistible (build 8) | TH_0493 | - | 0.0 | 74.56% (574) | conserved membrane protein |
M. ulcerans Agy99 | MUL_0139 | - | 0.0 | 84.29% (573) | hypothetical protein MUL_0139 |
M. vanbaalenii PYR-1 | Mvan_4591 | - | 0.0 | 73.52% (574) | hypothetical protein Mvan_4591 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2113|M.gilvum_PYR-GCK ----MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVIHLF Mvan_4591|M.vanbaalenii_PYR-1 ----MGFLKQDAPVVDYAEWSKGTRAERIVPMARHWAEVGFGTPVVLHLF MSMEG_5202|M.smegmatis_MC2_155 ----MGFLKQTAPQVDFEEWSKGTRAEKIRPMARHWAEVGFGTPVALHLF TH_0493|M.thermoresistible__bu ----MGFLKQNTPVVDYEQWRTGTRAEKIKPMARHWAEVGFGTPVALHLF MAB_4552|M.abscessus_ATCC_1997 ----MGFLKPTLPVVDVADWGKGTRAEKIRPMARHWAEVGFGTPVALHLF Rv1132|M.tuberculosis_H37Rv ----MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLF Mb1163|M.bovis_AF2122/97 ----MGFLQPRLPDIDLAEWSQGSRSQKIRPMAQHWAEVGFGTPVLLHLF MMAR_4329|M.marinum_M MCETMGFLKPVLPQVDIVEWGKGTRSEKIRPMARHWAEVGFGTPVVMHLF MUL_0139|M.ulcerans_Agy99 ----MGFLKPVLPQVDIVEWGKGTRSEKIRPMARHWAEVGFGTPVVMHLF MAV_1261|M.avium_104 ----MGFLKPELPQLDMAEWNKGTRSDKIRPMAKHWAEVGFGTPVALHLF ****: * :* :* *:*:::* ***:*********** :*** Mflv_2113|M.gilvum_PYR-GCK YVVKILLYVLVAWLIVLS-TSGIDGFTDVAAWYHEPIVYQKVVFYTMLFE Mvan_4591|M.vanbaalenii_PYR-1 YVVKILLYILVAWLIVLT-TSGIDGFTNVAAWYHEPIVYQKVVFYTMLFE MSMEG_5202|M.smegmatis_MC2_155 YVVKICLYVLGAWLVVLS-TRGIDGFTAVADWWTEPIVFEKVVLYTMLYE TH_0493|M.thermoresistible__bu YVLKIGLYILGAWLIAAA-TPGIGGLTDVADWWSEPIVFQKVVLYTMLFE MAB_4552|M.abscessus_ATCC_1997 YVLKIALYILGGWLFAMVTTEGIDRWTDFS----LPIVFQKVVLYTMLFE Rv1132|M.tuberculosis_H37Rv YVAKILLYVLVGWLIVLT-TKGIDGFTDAAAWYAEPIVFEKVVLYTMLFE Mb1163|M.bovis_AF2122/97 YVAKILLYVLVGWLIVLT-TKGIDGFTDAAAWYAEPIVFEKVVLYTMLFE MMAR_4329|M.marinum_M YVGKILLYILVGWLIVFS-TKGIEGFTDVKSWYTEPIVFQKVVLYTMLFE MUL_0139|M.ulcerans_Agy99 YVGKILLYILVGWLIVFS-TKGIEGFTDVKSWYTEPIVFQKVVLYTMLFE MAV_1261|M.avium_104 YVVKILLYILGGWLFASA-TRGLGGFTHVASWWSEPIVFEKVVLYTMLFE ** ** **:* .**.. * *: * ***::***:****:* Mflv_2113|M.gilvum_PYR-GCK VVGLGCGFGPLNNRFFPPMGSVLYWLRPRTIRLPPWPNRVPLTAGDTRTP Mvan_4591|M.vanbaalenii_PYR-1 VVGLGCGFGPLNNRFFPPMGSILYWLRPRTIRLPPWPNRVPLTAGDSRTP MSMEG_5202|M.smegmatis_MC2_155 VVGLGCGFGPLNNRFFPPMGSILYWLRPKTIRLPPWPDRVPLTKGDTRTV TH_0493|M.thermoresistible__bu VVGLGCGFGPLNNRFFPPMGSILYWLRPNTIRLPPWPNRIPFTRGTTRTP MAB_4552|M.abscessus_ATCC_1997 VVGLGCGFGPLNNRFFPPLGSILYWLRPNTIRLPPWP-RIPLTKGSARTA Rv1132|M.tuberculosis_H37Rv VIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPWTRGTKRKP Mb1163|M.bovis_AF2122/97 VIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPWTRGTKRKP MMAR_4329|M.marinum_M VVGLGCGFGPLNNRFFPPMGSSLYWLRFGTIRLPPWPERVPWTAGTKRKP MUL_0139|M.ulcerans_Agy99 VVGLGCGFGPLNNRFFPPMGSSLYWLRFGTIRLPPWPERVPWTAGTKRKP MAV_1261|M.avium_104 VIGLGCGFGPLNNRFFPPMGSILYWMRFGTIRLPPWPDRVPFTAGTKRKP *:****************:** ***:* ******** *:* * * *. Mflv_2113|M.gilvum_PYR-GCK VDVVLYAALLAVLVIALFSDGTGPIPEIGSEVGVLPVWQTATIIGLLVVA Mvan_4591|M.vanbaalenii_PYR-1 FDVLLYAALLVMLLFALFSDGTGPIPELGSEVGVLPVWQTATIIGLLVVA MSMEG_5202|M.smegmatis_MC2_155 FDAVLYGALLVVLLIAIFSDGTGPLPALGTEIGVLPMWQIAAVLVLLAVL TH_0493|M.thermoresistible__bu VDVALYGALLVMLVVALASGGTGPVEALGTDIGLLPAWQIWAVLGLLAAA MAB_4552|M.abscessus_ATCC_1997 VDIALYAAFLGMVLVALLSQPT--------AAGLLPTWQTAAILGLLVIT Rv1132|M.tuberculosis_H37Rv VDVALYALLVMMLLSALFTDGAGPIPELGTTVGLLPAWQIVLILLLLGVL Mb1163|M.bovis_AF2122/97 VDVALYALLVMMLLSALFTDGAGPIPELGTMVGLLPAWQIVLILLLLGVL MMAR_4329|M.marinum_M VDVALYALLLIMLVTALFTDGSGPMPELGSKVGLLPMWEIVMILLLLAMV MUL_0139|M.ulcerans_Agy99 VDVALYALLLIMLVTALFTDGSGPMPELGSKVGLLPMWEIVMILLLLAMV MAV_1261|M.avium_104 VDVALYALFLLLTLAALFADGTGPVPELGTTIGLLPAWKIVLILLVLAVL .* **. :: : : *: : : *:** *: :: :* Mflv_2113|M.gilvum_PYR-GCK GLRDKVIFLAARGEVYGSLAVCFLFS---GADIIIAAKLVCLTIWIGAAT Mvan_4591|M.vanbaalenii_PYR-1 GLRDKVIFLAARGEVYGSLAVCFLFS---GADIIIAAKLVCLVIWLGAAT MSMEG_5202|M.smegmatis_MC2_155 GLRDKVIFLAARGEVYASFTVAFLFAG-HGVDAILAAKLVCMVIWLGAAT TH_0493|M.thermoresistible__bu GLRDKVIFLAARGEVYASLTVTFLFA---GPDMIVAAKIVFLIIWLGAGV MAB_4552|M.abscessus_ATCC_1997 GLRDKVIFLAARGEVYGALTVAFLFT---GADMIMAAKLIFMVIWIGAAT Rv1132|M.tuberculosis_H37Rv GLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIWIGAAT Mb1163|M.bovis_AF2122/97 GLRDKVIFLAARGEVYATLTVTFLFGRLNGIDMIVAAKLVFLVIWIGAAT MMAR_4329|M.marinum_M GLRDKVIFLAARGEVYGTLTVTFLLG---GIDMIVAAKLVFLVIWMGAAT MUL_0139|M.ulcerans_Agy99 GLRDKVIFLAARGEVYGTLTVTFLLG---GIDMIVAAKLVFLVIWMGAAT MAV_1261|M.avium_104 GLRDKVIFLAARGEVYASMAVTFLFG---APDMIVGSKVVFLVIWMGAAT ****************.:::* **: . * *:.:*:: : **:**.. Mflv_2113|M.gilvum_PYR-GCK SKLNKHFPFVISTMMSNNPVIRPRSIKRKFFEHFPDDLRPGRASRVLAHF Mvan_4591|M.vanbaalenii_PYR-1 SKLNKHFPFVISTMMSNNPVMRPRWIKRKFFEHFPDDLRPGRASRFLAHF MSMEG_5202|M.smegmatis_MC2_155 SKLNKHFPFVISTMMSNNPVLRPRFIKRKFFEHFPDDLRPGRPSRWLAHV TH_0493|M.thermoresistible__bu SKLNRHFPFVISTMMSNNPVFRPRWIKRRFFERFPDDLRPGRASRWLAHL MAB_4552|M.abscessus_ATCC_1997 SKLNRHFPFVISTMMSNNPLIRARRLKRAFFEKFPDDLRPGRLSRVVAHV Rv1132|M.tuberculosis_H37Rv SKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHV Mb1163|M.bovis_AF2122/97 SKLNRHFPFVISTMMSNNPLFRPRFIKRMFFKKFPGDLRPGLLSRIVAHV MMAR_4329|M.marinum_M SKLNRHFPFVISTMMSNNPLFRPRFIKRMFFAKFPDDLRPGLLSRMLAHL MUL_0139|M.ulcerans_Agy99 SKLNRHFPFVISTMMSNNPLFRPRFIKRMFFAKFPDDLRPGLLSRMLAHL MAV_1261|M.avium_104 SKLNKHFPFVISTMMSNNPLVRPRWLKRRFFEKFPDDLRPGRLSRWIAHL ****:**************:.*.* :** ** :**.***** ** :**. Mflv_2113|M.gilvum_PYR-GCK STAIEMLVPLVLFFSHGGWPTAIAAFVMLVFHFGILSAIPMGVPLEWNVF Mvan_4591|M.vanbaalenii_PYR-1 STAIEGLVPLVLFFSHGGWATAIAAFVMLVFHFGILSAIPMGVPLEWNVF MSMEG_5202|M.smegmatis_MC2_155 STAIEMLVPLALFFSHGGWPTALAATVMICFHFGILSAIPMGVPLEWNVF TH_0493|M.thermoresistible__bu ATAIELLVPLVLFFSHGGWATAIAAGVMVLFHFGILSAIPMGVPLEWNVF MAB_4552|M.abscessus_ATCC_1997 STAVEGLVPFALFFSHGGWVTTVAAGVMVCFHLGILTAIPMGVPLEWNVF Rv1132|M.tuberculosis_H37Rv STVIEMCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVF Mb1163|M.bovis_AF2122/97 STVIEMCVPVVLFVAHGGWPTVVAATIMVCFHLGILTAIPMGVPLEWNVF MMAR_4329|M.marinum_M STFIEMFVPVALFLSHGGWPTTAAAIAMVCFHLGILTAIPMGVPLEWNVF MUL_0139|M.ulcerans_Agy99 STFIEMFVPVALFLSHGGWPTTAAAIAMVCFHLGILTAIPMGVPLEWNVF MAV_1261|M.avium_104 STAIEMLVPLPLFFCHGGWPVTVAAVVMVCFHLGILVSIPMGVPLEWNVF :* :* **. **..**** .. ** *: **:*** :************ Mflv_2113|M.gilvum_PYR-GCK MMFSVLALFVGNAGIGLGDLQSPWPIVLFAVVAG-TVVIGNLFPRKVSFL Mvan_4591|M.vanbaalenii_PYR-1 MMFSVLALFVGNAGIGLADLQSPWPILLFAAVAG-TVVIGNLFPRKVSFL MSMEG_5202|M.smegmatis_MC2_155 MIFCVATLFVGHADVGITDLSTPLPLLLLAVLVT-TVTLGNLFPRKISFL TH_0493|M.thermoresistible__bu MIFGVLWLFVTHAQFGLADVGNPWPVAALSLVLAGTVVLGNLFPHKVSFL MAB_4552|M.abscessus_ATCC_1997 MIFGVLALFVSHANVGLSDMQHPAPVLLLLAVSAGVVATGNLLPRKVSFL Rv1132|M.tuberculosis_H37Rv MIFGVLSLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFL Mb1163|M.bovis_AF2122/97 MIFGVLSLFVGHACLGLADVKNPVPLAILIAVVAGIVIAGNVFPRKISFL MMAR_4329|M.marinum_M MIFGVLALFVGHADLGLTDVKSPVPVAILFAVVAGIVILGNLFPRKISFL MUL_0139|M.ulcerans_Agy99 MIFGVLALFVGHADLGLTDVKSPVPVAILFAVVAGIVILGNLFPRKISFL MAV_1261|M.avium_104 MIFGVLSLFVAHTGIGLGDLRHPVVVAVLFVVIAGIVVLGNMFPRKISFL *:* * *** :: .*: *: * : : : * **::*:*:*** Mflv_2113|M.gilvum_PYR-GCK PGMRYYAGNWDTTLWCVKPSASEKITSGIVAIASMPAAQMEKFYGSKETA Mvan_4591|M.vanbaalenii_PYR-1 PGMRYYAGNWDTTLWCVKPSAAEKIANGIVAIASMPAAQMEKFYGSKETA MSMEG_5202|M.smegmatis_MC2_155 PGMRYYAGNWDTSLWCVKPSAAEKIEKNIVAIASMPAAQMERYYGSPETA TH_0493|M.thermoresistible__bu PGMRYYAGNWDTTLWCVKPSAEEKINNGIVAIASMPAAQMERYYGSKETA MAB_4552|M.abscessus_ATCC_1997 PGMRYYAGNWDTTLWCIKPSASAKIEKGIVAIASMPQAQMERYYGSKDAA Rv1132|M.tuberculosis_H37Rv AAMRYYAGNWDTTLWCIKPSAEDKINRGIVAIASMPAAQLERFYGK-DRA Mb1163|M.bovis_AF2122/97 AAMRYYAGNWDTTLWCIKPSAEDKINRGIVAIASMPAAQLERFYGK-DRA MMAR_4329|M.marinum_M PGMRYYAGNWDTTLWCIKPSADAKIKRGIVAIASMPQAQLERFYGK-DRA MUL_0139|M.ulcerans_Agy99 PGMRYYAGNWDTTLWCIKPSADAKIKRGIVAIASMPQAQLERFYGK-DRA MAV_1261|M.avium_104 PGMRYYAGNWDTTLWCIKPSASEKISRGIVAIASMPQAQLERFYGSPEAA ..**********:***:**** ** .******** **:*::**. : * Mflv_2113|M.gilvum_PYR-GCK EMYQYMGYAFRSFNTHGRAMFTLAHRAMAGQDEGEYVLTDGERICSTAIG Mvan_4591|M.vanbaalenii_PYR-1 EVYQYMGYAFRSFNTHGRAMFTLAHRAMADGSEDDYVLTDGERICSTAIG MSMEG_5202|M.smegmatis_MC2_155 QMYLYMGYAFRGFNSHGRALFTLAHRAMAGHDEGEYVLTDGERIVSTAIG TH_0493|M.thermoresistible__bu EMYLYMGYAFRAFNTHGKALFTLAHRAMAGHDEDDYTIIDGERICSTAIG MAB_4552|M.abscessus_ATCC_1997 QIYMYIGYAFRAMNTHGRAMFTLAHRAMAGQDESEYVITDGERICSTAIG Rv1132|M.tuberculosis_H37Rv QIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDYVITDGERVCSTAVG Mb1163|M.bovis_AF2122/97 QIPMYLGYAFRAMNSHGRALFTLAHRAMAGHDEDDYVITDGERVCSTAVG MMAR_4329|M.marinum_M QIPMYLGYAFRAMNTHGRALFTLAHRAMAGQDEDDYVITDGERICSTAVG MUL_0139|M.ulcerans_Agy99 QIPMYLGYAFRAMNTHGRALFTLAHRAMAGQDEDDYVITDGERICSTAVG MAV_1261|M.avium_104 QIPLYMGYAFRGFNTHGRALFTLAHRAMAGQNEDDYVITDGERICSTAIG :: *:*****.:*:**:*:*********. .*.:*.: ****: ***:* Mflv_2113|M.gilvum_PYR-GCK WNFGDGHMHNEQLITALQKRCRFEPGEVRVLILDAQPIHKQRQEYRLVDA Mvan_4591|M.vanbaalenii_PYR-1 WNFGDGHMHNEQLIAALQKRCQFEPGEVRVLLLDAQPIHRQRQEYRLVDA MSMEG_5202|M.smegmatis_MC2_155 WNFGDGHMSNEQLVDALQKRCHFEPGEVRIVMLDAQPIQRQTQNYRLVDA TH_0493|M.thermoresistible__bu WNFGDGHMHNEQLIEAMQQRCGFEPGEVRVVLLDAQPIHRQTQQYRLVDA MAB_4552|M.abscessus_ATCC_1997 WNFGDGHMHNEQLIAAMQERCHFEPGEVRIVLLDAQPIHRQTQRYRLVDA Rv1132|M.tuberculosis_H37Rv WNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYRLVDA Mb1163|M.bovis_AF2122/97 WNFGDGHLHNEQLIAAMQQRCGFQPGEVRVVLLDAQPIHRQTQEYRLVDA MMAR_4329|M.marinum_M WNFGDGHMHNEQLIAAMQQRCNFEPGEVRIVLLDAQPIHKQTQAYRLVDA MUL_0139|M.ulcerans_Agy99 WNFGDGHMHNEQLIAAMQQRCNFEPGEVRIVLLDAQPIHKQTQAYRLVDA MAV_1261|M.avium_104 WNFGDGHMHNEQLIAALQERCHFEPGEVRVVLLDAQPIHKQTQAYRLVDA *******: ****: *:*:** *:*****:::******::* * ****** Mflv_2113|M.gilvum_PYR-GCK ATGEFERGYVMVADMVTRQPWDDTVPVHVTWQKSG------- Mvan_4591|M.vanbaalenii_PYR-1 ATGEFERGYVMVADMVTRQPWDDTVPVHVTWRR--------- MSMEG_5202|M.smegmatis_MC2_155 ATGEFERGYVKVADMVTRQPWDDDVPVHGVHSLSGERREHA- TH_0493|M.thermoresistible__bu ATGEFERGYVRVADMVVRQPWDDTVPVHVTSSTLPTDRDSAR MAB_4552|M.abscessus_ATCC_1997 ATGEFESGYVRVADMVNRQPWDDELPVQVNS----------- Rv1132|M.tuberculosis_H37Rv ATGEFERGYVRVADMVNRQPWDDDVPVHVLPG---------- Mb1163|M.bovis_AF2122/97 ATGEFERGYVRVADMVNRQPWDDDVPVHVLPG---------- MMAR_4329|M.marinum_M ATGEFERGWVRVSDMVTRQPWADDVPVQVQSE---------- MUL_0139|M.ulcerans_Agy99 ATGEFERGWVRVSDMVTRQPWADDVPVQVQSE---------- MAV_1261|M.avium_104 ATGEFERGIVRVADMVVRQPWDDDVPVQVVSDDAPSVTPE-- ****** * * *:*** **** * :**: