For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSGTSWLQFAALIAVLLLTAPALGGYLAKIYGDEAKKPGDRVFGPIERVIYQVCRVDPGSEQRWSTYALS VLAFSVMSFLLLYGIARFQGVLPFNPTDKPAVTDHVAFNAAVSFMTNTNWQSYSGEATMSHFTQMTGLAV QNFVSASAGMCVLAALIRGLARKRASTLGNFWVDLARTVLRIMFPLSFVVAILLVSQGVIQNLHGFIVAN TLEGAPQLIPGGPVASQVAIKQLGTNGGGFFNVNSAHPFENYTPIGNFVENWAILIIPFALCFAFGKMVH DRRQGWAVLAIMGIIWIGMSVAAMSFEAKGNPRLDALGVTQQTTVDQSGGNLEGKEVRFGVGASGLWAAS TTGTSNGSVNSMHDSYTPLGGMVPLAHMMLGEVSPGGTGVGLNGLLVMAILAVFIAGLMVGRTPEYLGKK IQATEMKLVTLYILAMPIALLSFAAASVLISSALASRNNPGPHGLSEILYAYTSGANNNGSAFAGLTAST WSYDTTIGVAMLIGRFFLIIPVLAIAGSLARKGTTPVTAATFPTHKPLFVGLVIGVVLIVGGLTFFPALA LGPIVEQLSTQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1029 | kdpA | - | 100% (571) | potassium-transporting ATPase subunit A |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1058 | kdpA | 0.0 | 100.00% (571) | potassium-transporting ATPase subunit A |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3254c | - | 1e-148 | 50.52% (572) | potassium-transporting ATPase subunit A |
| M. marinum M | MMAR_0631 | kdpA | 1e-152 | 51.78% (562) | potassium-transporting ATPase a subunit, KdpA |
| M. avium 104 | MAV_1173 | kdpA | 1e-154 | 51.76% (568) | potassium-transporting ATPase subunit A |
| M. smegmatis MC2 155 | MSMEG_5392 | kdpA | 1e-157 | 53.21% (560) | potassium-transporting ATPase subunit A |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4759 | - | 1e-157 | 52.67% (562) | potassium-transporting ATPase subunit A |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0631|M.marinum_M ----MAGILFLASLMVALVAVHVPFGDYMYRVYT-----------SDKHS
Mvan_4759|M.vanbaalenii_PYR-1 MSTGLAGILFLASLVIALVAVHVPLGDYMYRVYN-----------TAKDS
MSMEG_5392|M.smegmatis_MC2_155 MSPTTAGIAFLASLVAAVVLVHVPLGDYMYRVYT-----------SEKDS
MAV_1173|M.avium_104 MSSTTAGLIFLAVLVAALVVVHVPLGDYMFRVYT-----------TDRDL
MAB_3254c|M.abscessus_ATCC_199 MNSALAAGLQIGFVILALAIAYVPLGDYMARVFTGPHSLRASGLSTIKHS
Rv1029|M.tuberculosis_H37Rv MSG--TSWLQFAALIAVLLLTAPALGGYLAKIYG----DEAKKPGDRVFG
Mb1058|M.bovis_AF2122/97 MSG--TSWLQFAALIAVLLLTAPALGGYLAKIYG----DEAKKPGDRVFG
:. :. :: .: . .:*.*: :::
MMAR_0631|M.marinum_M RVERWIYRAIGADPHAEQGWGAYARSVLAFSASGILVLFTFQLMQGKLPL
Mvan_4759|M.vanbaalenii_PYR-1 RAENVVYRLIGADPKAEQTWGAYARSVLAFSAVSLLFLFILQLVQGRLPS
MSMEG_5392|M.smegmatis_MC2_155 RAERLIYRVIGADPRAEQSWGSYARSVLAFSAVSIVFLFGLQLVQGRLPL
MAV_1173|M.avium_104 AAERTIYRLIGVDARSEQTWGAYARGVLAFSSVSIIFLFVLQLVQGKLPL
MAB_3254c|M.abscessus_ATCC_199 RVERLIYRVGRVDPETEQTWVGYTLSLLGFSFASVIFLYVLQRIQGVLP-
Rv1029|M.tuberculosis_H37Rv PIERVIYQVCRVDPGSEQRWSTYALSVLAFSVMSFLLLYGIARFQGVLPF
Mb1058|M.bovis_AF2122/97 PIERVIYQVCRVDPGSEQRWSTYALSVLAFSVMSFLLLYGIARFQGVLPF
*. :*: .*. :** * *: .:*.** ..:.*: : .** **
MMAR_0631|M.marinum_M HLNDPATPMNPVLAWNTAVSFVTNTNWQAYSGESTQGHLVQMAGLAVQNF
Mvan_4759|M.vanbaalenii_PYR-1 ALTDPGTPMTPALAWNTAVSFVTNTNWQAYSGESTHGHLVQMAGLAVQNF
MSMEG_5392|M.smegmatis_MC2_155 HLHDPATPMTPALAWNTAVSFVTNTNWQAYAGESTQGHLVQMAGLAVQNF
MAV_1173|M.avium_104 HLHDPATKMTPSLAWNTAVSFVTNTNWQAYSGETTQGHLVQMAGLAVQNF
MAB_3254c|M.abscessus_ATCC_199 -LSGGLGAVSPAVAFNTAVSFVTNTNWQSYTPETTMSNLTQMVGLAVQNF
Rv1029|M.tuberculosis_H37Rv NPTDKP-AVTDHVAFNAAVSFMTNTNWQSYSGEATMSHFTQMTGLAVQNF
Mb1058|M.bovis_AF2122/97 NPTDKP-AVTDHVAFNAAVSFMTNTNWQSYSGEATMSHFTQMTGLAVQNF
. :. :*:*:****:******:*: *:* .::.**.*******
MMAR_0631|M.marinum_M VSAAVGMAVAMAVVRGFARRHTG-DLGNFWVDLVRGTIRILLPVSVVAAI
Mvan_4759|M.vanbaalenii_PYR-1 VSAAVGMAVAIALVRGFARKRTG-ELGNFWVDLVRGTIRILLPISVIAAI
MSMEG_5392|M.smegmatis_MC2_155 VSAAVGMAVAIALVRGFARRHTG-ELGNFWVDLVRGNLRILLPLAIVGAL
MAV_1173|M.avium_104 VSAAVGMAVAVALVRGFARRRTG-ELGNFWVDLVRGTLRILLPISIVGAV
MAB_3254c|M.abscessus_ATCC_199 VSAAVGLTVAVALIRGVVRTTSGGELGNFWVDLVRGSLRILLPLSFAVAL
Rv1029|M.tuberculosis_H37Rv VSASAGMCVLAALIRGLARKRAS-TLGNFWVDLARTVLRIMFPLSFVVAI
Mb1058|M.bovis_AF2122/97 VSASAGMCVLAALIRGLARKRAS-TLGNFWVDLARTVLRIMFPLSFVVAI
***:.*: * *::**..* :. ********.* :**::*::. *:
MMAR_0631|M.marinum_M VLVAGGAIQNFHLRDQIVSTLSGAEQTITGGPVASQETIKDLGTNGGGFF
Mvan_4759|M.vanbaalenii_PYR-1 LLITGGAIQNFHNYDQVVNTLAGAQQTIPGGPVASQEAIKDLGTNGGGFY
MSMEG_5392|M.smegmatis_MC2_155 LLVAGGAIQNFALHEQVVTTLSGAAQTIPGGPVAGQEAIKELGTNGGGFF
MAV_1173|M.avium_104 LLVAGGAIQNFHLHDQVVTTLGGTAQTIPGGPVASQEVIKELGTNGGGFY
MAB_3254c|M.abscessus_ATCC_199 ILLSQGTIQSVYTHFEAT-ALDGTAQHIALAPVASQEAIKEIGTNGGGIL
Rv1029|M.tuberculosis_H37Rv LLVSQGVIQNLHG-FIVANTLEGAPQLIPGGPVASQVAIKQLGTNGGGFF
Mb1058|M.bovis_AF2122/97 LLVSQGVIQNLHG-FIVANTLEGAPQLIPGGPVASQVAIKQLGTNGGGFF
:*:: *.**.. . :* *: * *. .***.* .**::******:
MMAR_0631|M.marinum_M NVNSAHPFENPTAWTNWVEIFLLLVISFSLPRTFGRMVGSPKQGIAIASV
Mvan_4759|M.vanbaalenii_PYR-1 NVNSAHPFENPTTWTNWIEIFLLLVIAFSLPRTFGRMVGNKKQGYAIVGV
MSMEG_5392|M.smegmatis_MC2_155 NVNSAHPFENPTPWTNWLENFLILLIPFSLPRTFGRMVGSARQGVAIAAI
MAV_1173|M.avium_104 NANSAHPFENPTAWTNWLEIFLILVIGFSLPRTFGRMVGNPKQGYAIASV
MAB_3254c|M.abscessus_ATCC_199 GANSAHPFENPTPLSNVIEILAILIIPVCLTRTYSTMVGDKRQGLTVLSV
Rv1029|M.tuberculosis_H37Rv NVNSAHPFENYTPIGNFVENWAILIIPFALCFAFGKMVHDRRQGWAVLAI
Mb1058|M.bovis_AF2122/97 NVNSAHPFENYTPIGNFVENWAILIIPFALCFAFGKMVHDRRQGWAVLAI
..******** *. * :* :*:* ..* ::. ** . :** :: .:
MMAR_0631|M.marinum_M MAVLALISWSTTMSMQLQ----------RHGTVPTAVGAAMEGVEQRFGV
Mvan_4759|M.vanbaalenii_PYR-1 QAVLAVISWSATLFFQLQ----------AHGTVPTAVGAAMEGVEQRFGV
MSMEG_5392|M.smegmatis_MC2_155 MGAIALASVSLTMLLQLQ----------HHGTVPTAVGAAMEGVEQRFGV
MAV_1173|M.avium_104 MASLYLLSTGFMLWFQLQ----------HHGTVPSAVGAAMEGVEQRFGV
MAB_3254c|M.abscessus_ATCC_199 MGTLFGGMLALVTWAESS----------PRGIAAQAAGAMMEGKEVRFGI
Rv1029|M.tuberculosis_H37Rv MGIIWIGMSVAAMSFEAKGNPRLDALGVTQQTTVDQSGGNLEGKEVRFGV
Mb1058|M.bovis_AF2122/97 MGIIWIGMSVAAMSFEAKGNPRLDALGVTQQTTVDQSGGNLEGKEVRFGV
. : : . : . *. :** * ***:
MMAR_0631|M.marinum_M ANSAVFAASTTLTSTGSVDSFHDSYTSLGGLVLLLNMQLGEVAPGGVGSG
Mvan_4759|M.vanbaalenii_PYR-1 ANSAVFAASTTLTSTGSVDSFHDSYTSLGGLVLLFNMQLGEVAPGGVGAG
MSMEG_5392|M.smegmatis_MC2_155 ADSAVFAGSTTLTSTGAVNSFHDSYTSLGGLMTMFNMQLGEIGPGGVGSG
MAV_1173|M.avium_104 PDSGVFAAATTLTSTGAVDSAHDSLTSLGGMITMFNMQLGEVAPGGTGSG
MAB_3254c|M.abscessus_ATCC_199 PGSALFAVSTTGTSTGAVDAAHDSFTAAGGGALILNMLLGEIAPGGVGTG
Rv1029|M.tuberculosis_H37Rv GASGLWAASTTGTSNGSVNSMHDSYTPLGGMVPLAHMMLGEVSPGGTGVG
Mb1058|M.bovis_AF2122/97 GASGLWAASTTGTSNGSVNSMHDSYTPLGGMVPLAHMMLGEVSPGGTGVG
*.::* :** **.*:*:: *** *. ** : :* ***:.***.* *
MMAR_0631|M.marinum_M LFGMLILAVITVFIAGLMVGRTPEYLGKKITPREIKLAATYLLISPLIAL
Mvan_4759|M.vanbaalenii_PYR-1 LYGILILAVITVFVAGLMVGRTPEYLGKKITPREIKLAATYFLVTPLIVL
MSMEG_5392|M.smegmatis_MC2_155 LYGMLILAIITVFVAGLMVGRTPEYLGKKITPREIKLAASYFLATPLIVL
MAV_1173|M.avium_104 LYGMLVLAVITVFVAGLMVGRTPEYLGKKINPREIKLAASYFLVTPLIVL
MAB_3254c|M.abscessus_ATCC_199 LYGILVLAIIAVFVGGLLVGRTPEFLGKKIGRRQITMAALSVLVMPALVL
Rv1029|M.tuberculosis_H37Rv LNGLLVMAILAVFIAGLMVGRTPEYLGKKIQATEMKLVTLYILAMPIALL
Mb1058|M.bovis_AF2122/97 LNGLLVMAILAVFIAGLMVGRTPEYLGKKIQATEMKLVTLYILAMPIALL
* *:*::*:::**:.**:******:***** ::.:.: .* * *
MMAR_0631|M.marinum_M TGSAVAMAMPGQRAAMLNTGP-------HGLSEVLYAFTSAANNNGSAFA
Mvan_4759|M.vanbaalenii_PYR-1 TGTAVAMAMPGQRAGMLNTGP-------HGLSEVLYAFTSAANNNGSAFA
MSMEG_5392|M.smegmatis_MC2_155 TGSAIAMAMPGQRAGMLNTGP-------HGLSEVLYAFTSTANNNGSAFA
MAV_1173|M.avium_104 TGTAIAMALPGERAGMANSGP-------HGLSEVLYAFTSAANNNGSAFA
MAB_3254c|M.abscessus_ATCC_199 VGTGISVALSTTTGYQGNSGDPGTPSSIHGFSEVLYAYASAANNNGSAFG
Rv1029|M.tuberculosis_H37Rv SFAAASVLISSALASRNNPGP-------HGLSEILYAYTSGANNNGSAFA
Mb1058|M.bovis_AF2122/97 SFAAASVLISSALASRNNPGP-------HGLSEILYAYTSGANNNGSAFA
:. :: :. . *.* **:**:***::* ********.
MMAR_0631|M.marinum_M GISVNTDWYNTALGLAMVFGRFLPIVLVLALAGSLVRQGTTPESIGTLPT
Mvan_4759|M.vanbaalenii_PYR-1 GITVNTEWYNTALGLAMVFGRFLPIILALALAGSLAQQGKTPPSIGTLPT
MSMEG_5392|M.smegmatis_MC2_155 GISVNTEWYNTALGLAMVFGRLLPIILVLALAGSLASQGVTPSSVGTLPT
MAV_1173|M.avium_104 GLSANTEWYNTALGLAMAFGRFLPIVLVLALAGSLARQGSTPDSAGTLPT
MAB_3254c|M.abscessus_ATCC_199 GLTVTSHWFQASLGMAMLLGRFLPIIFTLALAGSLATQRKTPASAGTLHT
Rv1029|M.tuberculosis_H37Rv GLTASTWSYDTTIGVAMLIGRFFLIIPVLAIAGSLARKGTTPVTAATFPT
Mb1058|M.bovis_AF2122/97 GLTASTWSYDTTIGVAMLIGRFFLIIPVLAIAGSLARKGTTPVTAATFPT
*::..: :::::*:** :**:: *: .**:****. : ** : .*: *
MMAR_0631|M.marinum_M HRPQFVGLVAGVTLILVALTFLPMLALGPLAEGIH--
Mvan_4759|M.vanbaalenii_PYR-1 HRPQFVGMVAGVTLILVALTFLPMLALGPLAEGIH--
MSMEG_5392|M.smegmatis_MC2_155 HRPQFVGMTVGVTLILVALTFLPILALGPLAEGIH--
MAV_1173|M.avium_104 HRPQFVGMVAGVTLIVVALTFLPMLALGPLAEGIH--
MAB_3254c|M.abscessus_ATCC_199 HGPMFAGLHTGTVLLVAALTFFPALALGPIAEAVL--
Rv1029|M.tuberculosis_H37Rv HKPLFVGLVIGVVLIVGGLTFFPALALGPIVEQLSTQ
Mb1058|M.bovis_AF2122/97 HKPLFVGLVIGVVLIVGGLTFFPALALGPIVEQLSTQ
* * *.*: *..*:: .***:* *****:.* :