For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRLDRDPRTVDWLTGRRAAGDALVLHGYDEA ATKRRRGEFAMLRAHEANLRLMAADRVLEHLGLRTRLFAAPGWLVSPGVRTALPANGFRLLADLHGITDL VRLTTVRARVLGIGEGFLAEPWWCRMVVMSAERIARRGGVVRIAVAARHLRKSGPLQAMLDAVDLAMLQG CTPMVYRWRADAAVLDAA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0784 | - | - | 100% (228) | hypothetical protein Rv0784 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0806 | - | 1e-129 | 100.00% (228) | hypothetical protein Mb0806 |
M. gilvum PYR-GCK | Mflv_1620 | - | 9e-88 | 70.18% (228) | hypothetical protein Mflv_1620 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0694 | - | 7e-82 | 67.43% (218) | hypothetical protein MAB_0694 |
M. marinum M | MMAR_4904 | - | 1e-107 | 81.58% (228) | hypothetical protein MMAR_4904 |
M. avium 104 | MAV_0731 | - | 1e-112 | 85.53% (228) | hypothetical protein MAV_0731 |
M. smegmatis MC2 155 | MSMEG_5836 | - | 2e-95 | 73.99% (223) | hypothetical protein MSMEG_5836 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0502 | - | 1e-107 | 81.58% (228) | hypothetical protein MUL_0502 |
M. vanbaalenii PYR-1 | Mvan_5133 | - | 2e-93 | 72.81% (228) | hypothetical protein Mvan_5133 |
CLUSTAL 2.0.9 multiple sequence alignment Rv0784|M.tuberculosis_H37Rv --------MSVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRL Mb0806|M.bovis_AF2122/97 --------MSVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRL MAV_0731|M.avium_104 ------MIVSVSGIGERTLPDVEAFCAQMDARNVPVSLLVAPRLSGDYRL MMAR_4904|M.marinum_M --MAGKLIVSVSGIGERTLADVESFCAQMDERSVPLSLLVAPRLKGGYRL MUL_0502|M.ulcerans_Agy99 --MAGKLIVSVSGIGERTLADVESFCAQMDERSVPLSLLVAPRLKGGYRL Mflv_1620|M.gilvum_PYR-GCK --MAGQLIVSISGVRDRTLDDVADFRAQLRERGVPASFLVAPRLKGGYRL Mvan_5133|M.vanbaalenii_PYR-1 MGVAGHLIVSISGISDRTLADVAAFRAALDDRGVPASFLVAPRLKGGYRL MSMEG_5836|M.smegmatis_MC2_155 --MTGQLIVSISQISHRTLDEVATFCAELDARGVPASLLVAPRLKGGYRL MAB_0694|M.abscessus_ATCC_1997 --MAGQLLVSVSGICDRTLDEIAVFTEEMDRRSIPLSFLVSPRLKGKYRL :*:* : . ** :: * : *.:* *:**:**: . *** Rv0784|M.tuberculosis_H37Rv DRDPRTVDWLTGRRAAGDALVLHGYDEAATKRRRGEFAMLRAHEANLRLM Mb0806|M.bovis_AF2122/97 DRDPRTVDWLTGRRAAGDALVLHGYDEAATKRRRGEFAMLRAHEANLRLM MAV_0731|M.avium_104 DRDPRTVEWLTGRRAGGDAIVLHGYDDAATKKRRGEFAMLRAHEANLRLM MMAR_4904|M.marinum_M DRDPHTVDWLAGRRNGGDALVLHGYDEAATKKRRGEFATLHAHEANLRVM MUL_0502|M.ulcerans_Agy99 DRDPHTVDWLAGRRNGGDALVLHGYDEAATKKRRGEFARLHAHEANLRVM Mflv_1620|M.gilvum_PYR-GCK DHDAPTVDWLTARRADGDAIVLHGYDEAATRARRDEFATLQAHEANLRLM Mvan_5133|M.vanbaalenii_PYR-1 DHDPTTVDWLVERRAQGDAVVLHGFDEAATKQRRGEFATLPAHEANLRLM MSMEG_5836|M.smegmatis_MC2_155 ESDAQTVEWLAARRASGDAVVLHGYDEAATKKRRGEFAALPAHEANLRLL MAB_0694|M.abscessus_ATCC_1997 VEDQPTVDWLAARRSRGDAIVLHGYDQAATKKRRDEFAALPAHEANLRLM * **:**. ** ***:****:*:***: **.*** * *******:: Rv0784|M.tuberculosis_H37Rv AADRVLEHLGLRTRLFAAPGWLVSPGVRTALPANGFRLLADLHGITDLVR Mb0806|M.bovis_AF2122/97 AADRVLEHLGLRTRLFAAPGWLVSPGVRTALPANGFRLLADLHGITDLVR MAV_0731|M.avium_104 AADRVLEHLGLRTRLFAAPGWVVSPGVVKALPGNGFRLLADLHGITDLVR MMAR_4904|M.marinum_M AADRVLEHLGLRTRLFAAPGWVVSPGVVKALPGNGFRLLADYHGISDLVR MUL_0502|M.ulcerans_Agy99 AADRVLEHLGLRTRLFAAPGWVVSPGVVKALPGNGFRLLADYHGISDLVR Mflv_1620|M.gilvum_PYR-GCK GADRVLEHLGLRTRLFAAPGWNVSQGTLIALPRNGFRLVAGLAGITDLVR Mvan_5133|M.vanbaalenii_PYR-1 AADRIMEHLGLRTRLFAAPGWNVSQGALTALPRNGFRTVAGLTGITDLVH MSMEG_5836|M.smegmatis_MC2_155 GADRILEHVGLRTRLFAAPGWNVSPGTVTALPRNGFRLLADLHGITDLVR MAB_0694|M.abscessus_ATCC_1997 AADRVMEQTGLRTRLFAAPGWTASAGAIEMLPRNGFRLNIGLSEITDLVR .***::*: ************ .* *. ** **** . *:***: Rv0784|M.tuberculosis_H37Rv LTTVRARVLGIGEGFLAEPWWCRMVVMSAERIARRGGVVRIAVAARHLRK Mb0806|M.bovis_AF2122/97 LTTVRARVLGIGEGFLAEPWWCRMVVMSAERIARRGGVVRIAVAARHLRK MAV_0731|M.avium_104 HSTVRARVLGIGEGFLSEPWWCRMVVLSAERIARRHGVVRVAVAARHLRK MMAR_4904|M.marinum_M KTTVRTRVLGIGEGFLSEPWWCRMVVLSADRVARRGGVVRIAVSARQLRK MUL_0502|M.ulcerans_Agy99 KTTVRTRVLGIGEGFLSEPWWCRMVVLSADRVARRGGVVRIAVSARQLRK Mflv_1620|M.gilvum_PYR-GCK RDMVRARVLGIGEGFLTEPWWCRTLVLAAARTARRHGVVRVAVAARHLRK Mvan_5133|M.vanbaalenii_PYR-1 RTTVRARVLGIGEGFLTEPWWCRTLVLAAERTARREGIVRVAVAARHLRR MSMEG_5836|M.smegmatis_MC2_155 RTTTRTRVVGIGEGFLTEPWWCRTLVLTAERTARRGGVVRVAVAARHLRA MAB_0694|M.abscessus_ATCC_1997 GTSVRARVLGIGEGFLSEPWWCRMLVLSAARTARRDGVVRVAISAKHLRK .*:**:*******:****** :*::* * *** *:**:*::*::** Rv0784|M.tuberculosis_H37Rv SGPLQAMLDAVDLAMLQGCTPMVYRWRADAA----VLDAA Mb0806|M.bovis_AF2122/97 SGPLQAMLDAVDLAMLQGCTPMVYRWRADAA----VLDAA MAV_0731|M.avium_104 PGPLQAMLDAVDLALMHNCEPTVYRWRPDRA----ALDAA MMAR_4904|M.marinum_M PGPRQAMLDAIDLALMYRCTPMVYNWRPDGA----VLDAA MUL_0502|M.ulcerans_Agy99 PGPRQAMLDAIDLALMYRCTPMVYNWRPDGA----VLDAA Mflv_1620|M.gilvum_PYR-GCK PGPRQAMLDAVDLSLMHACTPAVYEWSPLPA----LTDAA Mvan_5133|M.vanbaalenii_PYR-1 TGPRQAMLDAVDLALMHACAPTVYEWRPRAA----LTDAA MSMEG_5836|M.smegmatis_MC2_155 PGPRQAMLDAVDLALLHGCVPTVYRWQPESASPSVLNKAA MAB_0694|M.abscessus_ATCC_1997 PGPRQAMIDAIDLALLHGSAPGVYEWLPKQV----LHSVA .** ***:**:**::: . * **.* . . ..*