For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VAGQLIVSISGVRDRTLDDVADFRAQLRERGVPASFLVAPRLKGGYRLDHDAPTVDWLTARRADGDAIVL HGYDEAATRARRDEFATLQAHEANLRLMGADRVLEHLGLRTRLFAAPGWNVSQGTLIALPRNGFRLVAGL AGITDLVRRDMVRARVLGIGEGFLTEPWWCRTLVLAAARTARRHGVVRVAVAARHLRKPGPRQAMLDAVD LSLMHACTPAVYEWSPLPALTDAA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_1620 | - | - | 100% (234) | hypothetical protein Mflv_1620 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0806 | - | 7e-88 | 70.18% (228) | hypothetical protein Mb0806 |
| M. tuberculosis H37Rv | Rv0784 | - | 8e-88 | 70.18% (228) | hypothetical protein Rv0784 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0694 | - | 8e-94 | 70.09% (234) | hypothetical protein MAB_0694 |
| M. marinum M | MMAR_4904 | - | 9e-95 | 72.65% (234) | hypothetical protein MMAR_4904 |
| M. avium 104 | MAV_0731 | - | 2e-94 | 74.78% (230) | hypothetical protein MAV_0731 |
| M. smegmatis MC2 155 | MSMEG_5836 | - | 1e-100 | 78.32% (226) | hypothetical protein MSMEG_5836 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0502 | - | 3e-94 | 72.22% (234) | hypothetical protein MUL_0502 |
| M. vanbaalenii PYR-1 | Mvan_5133 | - | 1e-110 | 82.91% (234) | hypothetical protein Mvan_5133 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0806|M.bovis_AF2122/97 --------MSVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRL
Rv0784|M.tuberculosis_H37Rv --------MSVSGIGESTLADVDAFCAEMDARSVPVSLLVAPRMRDDYRL
MAV_0731|M.avium_104 ------MIVSVSGIGERTLPDVEAFCAQMDARNVPVSLLVAPRLSGDYRL
MMAR_4904|M.marinum_M --MAGKLIVSVSGIGERTLADVESFCAQMDERSVPLSLLVAPRLKGGYRL
MUL_0502|M.ulcerans_Agy99 --MAGKLIVSVSGIGERTLADVESFCAQMDERSVPLSLLVAPRLKGGYRL
Mflv_1620|M.gilvum_PYR-GCK --MAGQLIVSISGVRDRTLDDVADFRAQLRERGVPASFLVAPRLKGGYRL
Mvan_5133|M.vanbaalenii_PYR-1 MGVAGHLIVSISGISDRTLADVAAFRAALDDRGVPASFLVAPRLKGGYRL
MSMEG_5836|M.smegmatis_MC2_155 --MTGQLIVSISQISHRTLDEVATFCAELDARGVPASLLVAPRLKGGYRL
MAB_0694|M.abscessus_ATCC_1997 --MAGQLLVSVSGICDRTLDEIAVFTEEMDRRSIPLSFLVSPRLKGKYRL
:*:* : . ** :: * : *.:* *:**:**: . ***
Mb0806|M.bovis_AF2122/97 DRDPRTVDWLTGRRAAGDALVLHGYDEAATKRRRGEFAMLRAHEANLRLM
Rv0784|M.tuberculosis_H37Rv DRDPRTVDWLTGRRAAGDALVLHGYDEAATKRRRGEFAMLRAHEANLRLM
MAV_0731|M.avium_104 DRDPRTVEWLTGRRAGGDAIVLHGYDDAATKKRRGEFAMLRAHEANLRLM
MMAR_4904|M.marinum_M DRDPHTVDWLAGRRNGGDALVLHGYDEAATKKRRGEFATLHAHEANLRVM
MUL_0502|M.ulcerans_Agy99 DRDPHTVDWLAGRRNGGDALVLHGYDEAATKKRRGEFARLHAHEANLRVM
Mflv_1620|M.gilvum_PYR-GCK DHDAPTVDWLTARRADGDAIVLHGYDEAATRARRDEFATLQAHEANLRLM
Mvan_5133|M.vanbaalenii_PYR-1 DHDPTTVDWLVERRAQGDAVVLHGFDEAATKQRRGEFATLPAHEANLRLM
MSMEG_5836|M.smegmatis_MC2_155 ESDAQTVEWLAARRASGDAVVLHGYDEAATKKRRGEFAALPAHEANLRLL
MAB_0694|M.abscessus_ATCC_1997 VEDQPTVDWLAARRSRGDAIVLHGYDQAATKKRRDEFAALPAHEANLRLM
* **:**. ** ***:****:*:***: **.*** * *******::
Mb0806|M.bovis_AF2122/97 AADRVLEHLGLRTRLFAAPGWLVSPGVRTALPANGFRLLADLHGITDLVR
Rv0784|M.tuberculosis_H37Rv AADRVLEHLGLRTRLFAAPGWLVSPGVRTALPANGFRLLADLHGITDLVR
MAV_0731|M.avium_104 AADRVLEHLGLRTRLFAAPGWVVSPGVVKALPGNGFRLLADLHGITDLVR
MMAR_4904|M.marinum_M AADRVLEHLGLRTRLFAAPGWVVSPGVVKALPGNGFRLLADYHGISDLVR
MUL_0502|M.ulcerans_Agy99 AADRVLEHLGLRTRLFAAPGWVVSPGVVKALPGNGFRLLADYHGISDLVR
Mflv_1620|M.gilvum_PYR-GCK GADRVLEHLGLRTRLFAAPGWNVSQGTLIALPRNGFRLVAGLAGITDLVR
Mvan_5133|M.vanbaalenii_PYR-1 AADRIMEHLGLRTRLFAAPGWNVSQGALTALPRNGFRTVAGLTGITDLVH
MSMEG_5836|M.smegmatis_MC2_155 GADRILEHVGLRTRLFAAPGWNVSPGTVTALPRNGFRLLADLHGITDLVR
MAB_0694|M.abscessus_ATCC_1997 AADRVMEQTGLRTRLFAAPGWTASAGAIEMLPRNGFRLNIGLSEITDLVR
.***::*: ************ .* *. ** **** . *:***:
Mb0806|M.bovis_AF2122/97 LTTVRARVLGIGEGFLAEPWWCRMVVMSAERIARRGGVVRIAVAARHLRK
Rv0784|M.tuberculosis_H37Rv LTTVRARVLGIGEGFLAEPWWCRMVVMSAERIARRGGVVRIAVAARHLRK
MAV_0731|M.avium_104 HSTVRARVLGIGEGFLSEPWWCRMVVLSAERIARRHGVVRVAVAARHLRK
MMAR_4904|M.marinum_M KTTVRTRVLGIGEGFLSEPWWCRMVVLSADRVARRGGVVRIAVSARQLRK
MUL_0502|M.ulcerans_Agy99 KTTVRTRVLGIGEGFLSEPWWCRMVVLSADRVARRGGVVRIAVSARQLRK
Mflv_1620|M.gilvum_PYR-GCK RDMVRARVLGIGEGFLTEPWWCRTLVLAAARTARRHGVVRVAVAARHLRK
Mvan_5133|M.vanbaalenii_PYR-1 RTTVRARVLGIGEGFLTEPWWCRTLVLAAERTARREGIVRVAVAARHLRR
MSMEG_5836|M.smegmatis_MC2_155 RTTTRTRVVGIGEGFLTEPWWCRTLVLTAERTARRGGVVRVAVAARHLRA
MAB_0694|M.abscessus_ATCC_1997 GTSVRARVLGIGEGFLSEPWWCRMLVLSAARTARRDGVVRVAISAKHLRK
.*:**:*******:****** :*::* * *** *:**:*::*::**
Mb0806|M.bovis_AF2122/97 SGPLQAMLDAVDLAMLQGCTPMVYRWRADAA----VLDAA
Rv0784|M.tuberculosis_H37Rv SGPLQAMLDAVDLAMLQGCTPMVYRWRADAA----VLDAA
MAV_0731|M.avium_104 PGPLQAMLDAVDLALMHNCEPTVYRWRPDRA----ALDAA
MMAR_4904|M.marinum_M PGPRQAMLDAIDLALMYRCTPMVYNWRPDGA----VLDAA
MUL_0502|M.ulcerans_Agy99 PGPRQAMLDAIDLALMYRCTPMVYNWRPDGA----VLDAA
Mflv_1620|M.gilvum_PYR-GCK PGPRQAMLDAVDLSLMHACTPAVYEWSPLPA----LTDAA
Mvan_5133|M.vanbaalenii_PYR-1 TGPRQAMLDAVDLALMHACAPTVYEWRPRAA----LTDAA
MSMEG_5836|M.smegmatis_MC2_155 PGPRQAMLDAVDLALLHGCVPTVYRWQPESASPSVLNKAA
MAB_0694|M.abscessus_ATCC_1997 PGPRQAMIDAIDLALLHGSAPGVYEWLPKQV----LHSVA
.** ***:**:**::: . * **.* . . ..*