For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEGVAINFWLLRRDSVTVGTDDDA PGLRLAVVFLCAAAISAAVVTGYLRWTTPDRDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMM VPEHAGGFKEQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQPTSQAARALRVT LTKRGSGWLVLDVTPINAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0200 | - | - | 100% (229) | POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0206 | - | 1e-126 | 100.00% (229) | transmembrane protein |
M. gilvum PYR-GCK | Mflv_0469 | - | 4e-70 | 57.64% (229) | putative transmembrane protein |
M. leprae Br4923 | MLBr_02615 | - | 8e-97 | 74.67% (229) | hypothetical protein MLBr_02615 |
M. abscessus ATCC 19977 | MAB_4534c | - | 1e-52 | 41.15% (226) | hypothetical protein MAB_4534c |
M. marinum M | MMAR_0440 | - | 2e-98 | 75.98% (229) | transmembrane protein |
M. avium 104 | MAV_4975 | - | 3e-96 | 75.22% (226) | putative transmembrane protein |
M. smegmatis MC2 155 | MSMEG_0236 | - | 2e-75 | 58.95% (229) | putative transmembrane protein |
M. thermoresistible (build 8) | TH_2117 | - | 5e-70 | 53.71% (229) | putative conserved transmembrane protein |
M. ulcerans Agy99 | MUL_1090 | - | 1e-98 | 75.98% (229) | transmembrane protein |
M. vanbaalenii PYR-1 | Mvan_0186 | - | 3e-70 | 58.52% (229) | putative transmembrane protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0469|M.gilvum_PYR-GCK -MRNRWRVLVFDLLAPAAAIAALVYIGVALSWPLWWVAVCSVLCLLIVEG Mvan_0186|M.vanbaalenii_PYR-1 -MRNRLRLLAFDVLAPVAAVAALLYIGVALGWPLWWVSVCSVLCVLVAEG MSMEG_0236|M.smegmatis_MC2_155 -MRNRLRVLAFDVAAPLAAIAALVYLGAALGWPTWWVSVCSILCLLIVQG TH_2117|M.thermoresistible__bu -MRNLWRVFAFDLAAPAAAIAGLVGIGVVLGWPLWWVSLCSMLCLLIVQG Rv0200|M.tuberculosis_H37Rv -MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEG Mb0206|M.bovis_AF2122/97 -MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEG MMAR_0440|M.marinum_M -MRNAWRLAAFDILAPLVAIAALVMIGFILGWPWWWISACSVLVLLVLEG MUL_1090|M.ulcerans_Agy99 -MRNAWRLAAFDILAPLVAIAALVMIGFILGWPWWWISACSVLVLLVLEG MLBr_02615|M.leprae_Br4923 -MRNRWRLLAFDVVAPLVAIAALVMIGVVLDWPRWWVSACSVLVLLIVEG MAV_4975|M.avium_104 -MRNIWRLFAFDIAAPVAAIAALLAIGVVLGWPLWWVSACSVLVLLIVEG MAB_4534c|M.abscessus_ATCC_199 MSRNMLRVILFDLLAPVVTVLAIVELGVILRWPVWWVVVCTAVCVLIVEG ** *: **: ** .:: .: :* * ** **: *: : :*: :* Mflv_0469|M.gilvum_PYR-GCK VVVNLVLARRDAVTVGTDDEGPGLRLAVAGTAAAAVVAAAVVGYVSWTVP Mvan_0186|M.vanbaalenii_PYR-1 VVVNFVLARRDAVTVGTDDDGPGLRLAVVGVTTAALVGAAVVGYTQWTLP MSMEG_0236|M.smegmatis_MC2_155 VVVNVVLACRDGVTLGTDDDGPGLRLAVVGVATAALVAAVVVGYLRWTAP TH_2117|M.thermoresistible__bu MVVNYVLYRRDGVTMGTDDDGPGLRLAVVAVATATLVAAVLVGYARWTTA Rv0200|M.tuberculosis_H37Rv VAINFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTP Mb0206|M.bovis_AF2122/97 VAINFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTP MMAR_0440|M.marinum_M VAVNFWLFRRDAVTVGTDDEAPGLRLAVVFLCTAALVAAVLTGYTHWTSP MUL_1090|M.ulcerans_Agy99 VAVNFWLFRRDAVTVGTDDEAPGLRLAVVFLCTAALVAAVLTGYTHWTSP MLBr_02615|M.leprae_Br4923 VGVNFWLLRRDSVTIGTDDDAPGLRLAVVSVCTAALCAAVLIGYMHWTSP MAV_4975|M.avium_104 VLINFWLLRRDSVSLGTDDDAPGLRLAVVLLCTAALAAAVATGYTHWTRA MAB_4534c|M.abscessus_ATCC_199 MAVNAYLARRDSVTVGTDDDGPALRTGIVALATASVLAVAVVGYARWTLP : :* * **.*::****:.*.** .:. :*:: ... ** ** . Mflv_0469|M.gilvum_PYR-GCK DRVLRDDTAEVAGIASSVAEASATFTPQNPTGSIDRAAAMMSAASAERFK Mvan_0186|M.vanbaalenii_PYR-1 DRALRDDSAEVAGIASSVAEASATFTPQNPTASIDRAVGMMSAASAERFK MSMEG_0236|M.smegmatis_MC2_155 DDEFNRDREQVVRIASSVAEATATFTPQSPTASIDRAAAQMAPDRAEAFK TH_2117|M.thermoresistible__bu DRDLRADKAEVLDIATRVAEASATFTPADPNAQIEKATALMTPQRAEAYR Rv0200|M.tuberculosis_H37Rv DRDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFK Mb0206|M.bovis_AF2122/97 DRDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFK MMAR_0440|M.marinum_M DRDFNRDSRRVVAIATGMAEAVASFSPGAPNASADRAAAMMVPERVAEFK MUL_1090|M.ulcerans_Agy99 DRDFNRDSRRVVAIATGMAEAVASFSPGAPNASADRAAAMMVPERVAEFK MLBr_02615|M.leprae_Br4923 DRDFSLDSREVVQIATGMAEAMASFTPSAPTSSIDRAAAMIMPDQAGVFK MAV_4975|M.avium_104 DRDFTDDSHKVVAIATGMAESMASFSPTAPTGAIDRAAAMVVPEHAAAFK MAB_4534c|M.abscessus_ATCC_199 DREGNADRAAVTDVAATVSEAVVNFAPDNPDTSVRQATEHMTATQGQSFT * * * :*: ::*: ..*:* * :*. : . : Mflv_0469|M.gilvum_PYR-GCK SEFAAVAEDLGSRNVSAQARTVSAGVEAIGPDAASVAVILRGTQSAPGRR Mvan_0186|M.vanbaalenii_PYR-1 NEFAAVAEDLGGRNVSAQASTVSAGVEAIGPDAASVAVILRGTQSTPGQR MSMEG_0236|M.smegmatis_MC2_155 NEFATVAKDLTSRNVSAQASTVSAGVEALGPRAASVAVVLRGTQSVPGKP TH_2117|M.thermoresistible__bu QEFTAVAEDLTNRNISGQAQTVSAGVEAIGPEVASVAVIMRGTQNAPARP Rv0200|M.tuberculosis_H37Rv EQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQP Mb0206|M.bovis_AF2122/97 EQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQP MMAR_0440|M.marinum_M AQYAKSSADLVQHKITAQADTLSAGVEALGPSAASVAVILRVTQNSPGQP MUL_1090|M.ulcerans_Agy99 AQYAKSSADLVQHKITAQADTLSAGVEALGPSAASVAVILRVTQNSPGQP MLBr_02615|M.leprae_Br4923 EQYRKSSADLARRNVTAQASVLAAGVEAIGSSAASVAVILRVTQNTPGQP MAV_4975|M.avium_104 EQYTKSSAELAQHNVTAQAATVSAGVEALGPAAASVAVILRVTQNAPGQP MAB_4534c|M.abscessus_ATCC_199 RDFGRATAELKAKGISQQGEIVSVGIEALGPGDAVMATLVRRTSVAAKTR :: : :* : :: *. ::.*:**:*. * :*.::* :. . Mflv_0469|M.gilvum_PYR-GCK PDTAVLALRVALSKTDGRWVVEDVSPIHSR------- Mvan_0186|M.vanbaalenii_PYR-1 PDTAVLALRVALSKTDGRWIVEDVAPIHSR------- MSMEG_0236|M.smegmatis_MC2_155 TDNAVLALRVTLTKSDGRWLVDDVRPAHSR------- TH_2117|M.thermoresistible__bu PDHAVLALRVALVKTDGRWLVEDVLPINAR------- Rv0200|M.tuberculosis_H37Rv TSQAARALRVTLTKRGSGWLVLDVTPINAR------- Mb0206|M.bovis_AF2122/97 TSQAARALRVTLTKRGSGWLVLDVTPINAR------- MMAR_0440|M.marinum_M PSQAAPALRVSLTKRGNDWLVLDVVPINSR------- MUL_1090|M.ulcerans_Agy99 PSQAAPALRVSLTKRGNDWLVLDVVPINSR------- MLBr_02615|M.leprae_Br4923 PSQAAPAVRVTLIKRGSDWLVTDVLSINAR------- MAV_4975|M.avium_104 PSQAAPALRVTLTKRGGDWLVADVLPIR--------- MAB_4534c|M.abscessus_ATCC_199 PEQSVLALRLTLTKRDGRWLVDNIAPIDRIGAQVPKN .. :. *:*::* * .. *:* :: .