For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RNRWRVLVFDLLAPAAAIAALVYIGVALSWPLWWVAVCSVLCLLIVEGVVVNLVLARRDAVTVGTDDEGP GLRLAVAGTAAAAVVAAAVVGYVSWTVPDRVLRDDTAEVAGIASSVAEASATFTPQNPTGSIDRAAAMMS AASAERFKSEFAAVAEDLGSRNVSAQARTVSAGVEAIGPDAASVAVILRGTQSAPGRRPDTAVLALRVAL SKTDGRWVVEDVSPIHSR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_0469 | - | - | 100% (229) | putative transmembrane protein |
| M. gilvum PYR-GCK | Mflv_4528 | - | 7e-08 | 33.60% (125) | hypothetical protein Mflv_4528 |
| M. gilvum PYR-GCK | Mflv_2527 | - | 6e-07 | 25.12% (203) | hypothetical protein Mflv_2527 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0206 | - | 3e-70 | 57.64% (229) | transmembrane protein |
| M. tuberculosis H37Rv | Rv0200 | - | 3e-70 | 57.64% (229) | transmembrane protein |
| M. leprae Br4923 | MLBr_02615 | - | 1e-69 | 58.08% (229) | hypothetical protein MLBr_02615 |
| M. abscessus ATCC 19977 | MAB_4534c | - | 2e-61 | 48.00% (225) | hypothetical protein MAB_4534c |
| M. marinum M | MMAR_0440 | - | 1e-68 | 57.21% (229) | transmembrane protein |
| M. avium 104 | MAV_4975 | - | 2e-69 | 57.96% (226) | putative transmembrane protein |
| M. smegmatis MC2 155 | MSMEG_0236 | - | 3e-90 | 72.05% (229) | putative transmembrane protein |
| M. thermoresistible (build 8) | TH_2117 | - | 2e-86 | 68.56% (229) | putative conserved transmembrane protein |
| M. ulcerans Agy99 | MUL_1090 | - | 8e-69 | 57.21% (229) | transmembrane protein |
| M. vanbaalenii PYR-1 | Mvan_0186 | - | 1e-109 | 84.72% (229) | putative transmembrane protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0469|M.gilvum_PYR-GCK -MRNRWRVLVFDLLAPAAAIAALVYIGVALSWPLWWVAVCSVLCLLIVEG
Mvan_0186|M.vanbaalenii_PYR-1 -MRNRLRLLAFDVLAPVAAVAALLYIGVALGWPLWWVSVCSVLCVLVAEG
MSMEG_0236|M.smegmatis_MC2_155 -MRNRLRVLAFDVAAPLAAIAALVYLGAALGWPTWWVSVCSILCLLIVQG
TH_2117|M.thermoresistible__bu -MRNLWRVFAFDLAAPAAAIAGLVGIGVVLGWPLWWVSLCSMLCLLIVQG
MLBr_02615|M.leprae_Br4923 -MRNRWRLLAFDVVAPLVAIAALVMIGVVLDWPRWWVSACSVLVLLIVEG
MAV_4975|M.avium_104 -MRNIWRLFAFDIAAPVAAIAALLAIGVVLGWPLWWVSACSVLVLLIVEG
Mb0206|M.bovis_AF2122/97 -MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEG
Rv0200|M.tuberculosis_H37Rv -MRNAWRLVVFDVLAPLATIAALAAIGVLLGWPLWWVSTCSVLVLLVVEG
MMAR_0440|M.marinum_M -MRNAWRLAAFDILAPLVAIAALVMIGFILGWPWWWISACSVLVLLVLEG
MUL_1090|M.ulcerans_Agy99 -MRNAWRLAAFDILAPLVAIAALVMIGFILGWPWWWISACSVLVLLVLEG
MAB_4534c|M.abscessus_ATCC_199 MSRNMLRVILFDLLAPVVTVLAIVELGVILRWPVWWVVVCTAVCVLIVEG
** *: **: ** .:: .: :* * ** **: *: : :*: :*
Mflv_0469|M.gilvum_PYR-GCK VVVNLVLARRDAVTVGTDDEGPGLRLAVAGTAAAAVVAAAVVGYVSWTVP
Mvan_0186|M.vanbaalenii_PYR-1 VVVNFVLARRDAVTVGTDDDGPGLRLAVVGVTTAALVGAAVVGYTQWTLP
MSMEG_0236|M.smegmatis_MC2_155 VVVNVVLACRDGVTLGTDDDGPGLRLAVVGVATAALVAAVVVGYLRWTAP
TH_2117|M.thermoresistible__bu MVVNYVLYRRDGVTMGTDDDGPGLRLAVVAVATATLVAAVLVGYARWTTA
MLBr_02615|M.leprae_Br4923 VGVNFWLLRRDSVTIGTDDDAPGLRLAVVSVCTAALCAAVLIGYMHWTSP
MAV_4975|M.avium_104 VLINFWLLRRDSVSLGTDDDAPGLRLAVVLLCTAALAAAVATGYTHWTRA
Mb0206|M.bovis_AF2122/97 VAINFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTP
Rv0200|M.tuberculosis_H37Rv VAINFWLLRRDSVTVGTDDDAPGLRLAVVFLCAAAISAAVVTGYLRWTTP
MMAR_0440|M.marinum_M VAVNFWLFRRDAVTVGTDDEAPGLRLAVVFLCTAALVAAVLTGYTHWTSP
MUL_1090|M.ulcerans_Agy99 VAVNFWLFRRDAVTVGTDDEAPGLRLAVVFLCTAALVAAVLTGYTHWTSP
MAB_4534c|M.abscessus_ATCC_199 MAVNAYLARRDSVTVGTDDDGPALRTGIVALATASVLAVAVVGYARWTLP
: :* * **.*::****:.*.** .:. :*:: ... ** ** .
Mflv_0469|M.gilvum_PYR-GCK DRVLRDDTAEVAGIASSVAEASATFTPQNPTGSIDRAAAMMSAASAERFK
Mvan_0186|M.vanbaalenii_PYR-1 DRALRDDSAEVAGIASSVAEASATFTPQNPTASIDRAVGMMSAASAERFK
MSMEG_0236|M.smegmatis_MC2_155 DDEFNRDREQVVRIASSVAEATATFTPQSPTASIDRAAAQMAPDRAEAFK
TH_2117|M.thermoresistible__bu DRDLRADKAEVLDIATRVAEASATFTPADPNAQIEKATALMTPQRAEAYR
MLBr_02615|M.leprae_Br4923 DRDFSLDSREVVQIATGMAEAMASFTPSAPTSSIDRAAAMIMPDQAGVFK
MAV_4975|M.avium_104 DRDFTDDSHKVVAIATGMAESMASFSPTAPTGAIDRAAAMVVPEHAAAFK
Mb0206|M.bovis_AF2122/97 DRDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFK
Rv0200|M.tuberculosis_H37Rv DRDFNRDSREVVHLATGMAETVASFSPSAPAAAVDRAAAMMVPEHAGGFK
MMAR_0440|M.marinum_M DRDFNRDSRRVVAIATGMAEAVASFSPGAPNASADRAAAMMVPERVAEFK
MUL_1090|M.ulcerans_Agy99 DRDFNRDSRRVVAIATGMAEAVASFSPGAPNASADRAAAMMVPERVAEFK
MAB_4534c|M.abscessus_ATCC_199 DREGNADRAAVTDVAATVSEAVVNFAPDNPDTSVRQATEHMTATQGQSFT
* * * :*: ::*: ..*:* * :*. : . :
Mflv_0469|M.gilvum_PYR-GCK SEFAAVAEDLGSRNVSAQARTVSAGVEAIGPDAASVAVILRGTQSAPGRR
Mvan_0186|M.vanbaalenii_PYR-1 NEFAAVAEDLGGRNVSAQASTVSAGVEAIGPDAASVAVILRGTQSTPGQR
MSMEG_0236|M.smegmatis_MC2_155 NEFATVAKDLTSRNVSAQASTVSAGVEALGPRAASVAVVLRGTQSVPGKP
TH_2117|M.thermoresistible__bu QEFTAVAEDLTNRNISGQAQTVSAGVEAIGPEVASVAVIMRGTQNAPARP
MLBr_02615|M.leprae_Br4923 EQYRKSSADLARRNVTAQASVLAAGVEAIGSSAASVAVILRVTQNTPGQP
MAV_4975|M.avium_104 EQYTKSSAELAQHNVTAQAATVSAGVEALGPAAASVAVILRVTQNAPGQP
Mb0206|M.bovis_AF2122/97 EQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQP
Rv0200|M.tuberculosis_H37Rv EQYAKSSADLARRGVTAQAATLAAGVEAIGPSAASVAVILRVSQSIPGQP
MMAR_0440|M.marinum_M AQYAKSSADLVQHKITAQADTLSAGVEALGPSAASVAVILRVTQNSPGQP
MUL_1090|M.ulcerans_Agy99 AQYAKSSADLVQHKITAQADTLSAGVEALGPSAASVAVILRVTQNSPGQP
MAB_4534c|M.abscessus_ATCC_199 RDFGRATAELKAKGISQQGEIVSVGIEALGPGDAVMATLVRRTSVAAKTR
:: : :* : :: *. ::.*:**:*. * :*.::* :. .
Mflv_0469|M.gilvum_PYR-GCK PDTAVLALRVALSKTDGRWVVEDVSPIHSR-------
Mvan_0186|M.vanbaalenii_PYR-1 PDTAVLALRVALSKTDGRWIVEDVAPIHSR-------
MSMEG_0236|M.smegmatis_MC2_155 TDNAVLALRVTLTKSDGRWLVDDVRPAHSR-------
TH_2117|M.thermoresistible__bu PDHAVLALRVALVKTDGRWLVEDVLPINAR-------
MLBr_02615|M.leprae_Br4923 PSQAAPAVRVTLIKRGSDWLVTDVLSINAR-------
MAV_4975|M.avium_104 PSQAAPALRVTLTKRGGDWLVADVLPIR---------
Mb0206|M.bovis_AF2122/97 TSQAARALRVTLTKRGSGWLVLDVTPINAR-------
Rv0200|M.tuberculosis_H37Rv TSQAARALRVTLTKRGSGWLVLDVTPINAR-------
MMAR_0440|M.marinum_M PSQAAPALRVSLTKRGNDWLVLDVVPINSR-------
MUL_1090|M.ulcerans_Agy99 PSQAAPALRVSLTKRGNDWLVLDVVPINSR-------
MAB_4534c|M.abscessus_ATCC_199 PEQSVLALRLTLTKRDGRWLVDNIAPIDRIGAQVPKN
.. :. *:*::* * .. *:* :: .