For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_6033 (-)

annotation: single-strand DNA-binding protein
coordinates: 6440689 - 6441201
length: 170

AGDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQSGEWKDGEALFLRCNIWREAAENVAESL
TRGSRVIVTGRLKQRSFETREGEKRTVVEVEVEEIGPSLRYATAKVNKASRSGGGGGGFGGGGGGGNSRP
AANSAPAEDPWGSAPASGSFGGADDEPPF*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_6033--100% (170)single-strand DNA-binding protein
M. vanbaalenii PYR-1Mvan_4072-2e-1132.71% (107) hypothetical protein Mvan_4072

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0055ssb1e-7984.97% (173) single-stranded DNA-binding protein
M. gilvum PYR-GCKMflv_0875-4e-8790.64% (171) single-strand DNA-binding protein
M. tuberculosis H37RvRv0054ssb1e-7984.97% (173) single-stranded DNA-binding protein
M. leprae Br4923MLBr_02684ssb3e-8085.96% (171) single-stranded DNA-binding protein
M. abscessus ATCC 19977MAB_4898c-4e-8490.59% (170) single-stranded DNA-binding protein
M. marinum MMMAR_0073ssb2e-8489.83% (177) single-strand binding protein Ssb
M. avium 104MAV_1694ssb9e-1431.40% (121) hypothetical protein MAV_1694
M. smegmatis MC2 155MSMEG_6896-1e-8590.59% (170) single-strand DNA-binding protein
M. thermoresistible (build 8)TH_2093ssb1e-7985.96% (171) PROBABLE SINGLE-STRAND BINDING PROTEIN SSB
M. ulcerans Agy99MUL_0072ssb4e-8590.70% (172) single-stranded DNA-binding protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb0055|M.bovis_AF2122/97            MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDG
Rv0054|M.tuberculosis_H37Rv         MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDG
MLBr_02684|M.leprae_Br4923          MAGDTTITIVGNLTADPELRFTSSGAAVVNFTVASTPRIYDRQSGEWKDG
MMAR_0073|M.marinum_M               MAGDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQSGEWKDG
MUL_0072|M.ulcerans_Agy99           MAGDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQSGEWKDG
MAB_4898c|M.abscessus_ATCC_199      MAGDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRIFDRQSSEWKDG
MSMEG_6896|M.smegmatis_MC2_155      MAGDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRMFDRQSGEWKDG
Mvan_6033|M.vanbaalenii_PYR-1       MAGDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQSGEWKDG
Mflv_0875|M.gilvum_PYR-GCK          MAGDTIITVIGNLTADPELRFTPSGAAVANFTVASTPRMFDRQTNEWKDG
TH_2093|M.thermoresistible__bu      VAGDTVITVVGNLTADPELRFTPSGAAVANFTVASTPRIFDRQTGEWRDG
MAV_1694|M.avium_104                -MFETPLTVVGHIVNNPERRQVG-AQEVIKFRVASNSRRRTADGG-WEPG
                                       :* :*::*::. :** * .  .  * :* ***..*    : . *. *

Mb0055|M.bovis_AF2122/97            EALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIE
Rv0054|M.tuberculosis_H37Rv         EALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIE
MLBr_02684|M.leprae_Br4923          EALFLRCNIWREAAENVAESLTRGARVIVTGRLKQRSFETREGEKRTVVE
MMAR_0073|M.marinum_M               EALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVVE
MUL_0072|M.ulcerans_Agy99           EALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVVE
MAB_4898c|M.abscessus_ATCC_199      EALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVE
MSMEG_6896|M.smegmatis_MC2_155      EALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVE
Mvan_6033|M.vanbaalenii_PYR-1       EALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVE
Mflv_0875|M.gilvum_PYR-GCK          EALFLRCNIWREAAENVAESLVRGSRVIVSGRLKQRSFETREGEKRTVME
TH_2093|M.thermoresistible__bu      EALFLRCNIWREAAENVAETLTRGTRVIVQGRLKQRSFETREGEKRTVVE
MAV_1694|M.avium_104                NSLFINVNCWGRLVTGVGAALGKGAPVIVVGHVYTSEYEDRDGNRRSSLE
                                    ::**:. * * . . .*. :* :*: *** *::   .:* *:*::*: :*

Mb0055|M.bovis_AF2122/97            VEVDEIGPSLRYATAKVNKASRSGG----FGSG--------SRPAPAQTS
Rv0054|M.tuberculosis_H37Rv         VEVDEIGPSLRYATAKVNKASRSGG----FGSG--------SRPAPAQTS
MLBr_02684|M.leprae_Br4923          VEVDEIGPSLRYATAKVNKASRSGGGGGGFGSG--------SRQAPAQMS
MMAR_0073|M.marinum_M               VEVEEIGPSLRYATAKVNKASRGGGGGG-FGGGGGGGGGGGARQAPAQAS
MUL_0072|M.ulcerans_Agy99           VEVEEIGPSLRYATAKVNKASRGGGGGG-FGGGGGGG----ARQAPAQAS
MAB_4898c|M.abscessus_ATCC_199      VEVDEIGPSLRYATAKVNKASRGGGGGGGFGGG-------GGGG----SR
MSMEG_6896|M.smegmatis_MC2_155      VEVDEIGPSLRYATAKVNKASRSGGGGGGFGSG-------GGG-----SR
Mvan_6033|M.vanbaalenii_PYR-1       VEVEEIGPSLRYATAKVNKASRSGGGGGGFGGG-------GGGGNSRPAA
Mflv_0875|M.gilvum_PYR-GCK          LEVDEIGPSLRYATAKVNKASRSGGGGGGFGGG-------GGGNSRPAPS
TH_2093|M.thermoresistible__bu      LEVDEIGPSLRYATAKVNKVSRGGGGGG-FGSG----------GSRAAGG
MAV_1694|M.avium_104                MRATSVGPDVSRAIVRIEKPGYTGPSTDEAAPA------------AAEAA
                                    :.. .:**.:  * .:::* .  *      . .                 

Mb0055|M.bovis_AF2122/97            S-ASGDDPWGSAPASGSFGGGDDEPPF
Rv0054|M.tuberculosis_H37Rv         S-ASGDDPWGSAPASGSFGGGDDEPPF
MLBr_02684|M.leprae_Br4923          G-GVGDDPWGSAPTSGSFGVGDEEPPF
MMAR_0073|M.marinum_M               SPAGGDDPWGSAPASGSFG-GDDEPPF
MUL_0072|M.ulcerans_Agy99           SPAGGDDPWGSAPASGSFG-GDDEPPF
MAB_4898c|M.abscessus_ATCC_199      SSEPADDPWGSAPASGS-TAADDEPPF
MSMEG_6896|M.smegmatis_MC2_155      QSEPKDDPWGSAPASGSFSGADDEPPF
Mvan_6033|M.vanbaalenii_PYR-1       NSAPAEDPWGSAPASGSFGGADDEPPF
Mflv_0875|M.gilvum_PYR-GCK          NTGPAEDPWGSAPASGSFGGADDEPPF
TH_2093|M.thermoresistible__bu      AAEPKDDPWGSAPASGSFGDADDEPPF
MAV_1694|M.avium_104                DAAGEDADRGDTVEPVDTGPVPLSA--
                                         :   *.:  . .      ..