For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AENSRTVVFALYNKVTLQDVAAPLEIFARANDFGARYTVLLASPTGGAVGTTAYAQLNADLPLSEVPESI DTLLVPGGVPADFNFTPGIHDIPEEPTPDSVPDAMAMVRELAPRARRVASVCTGAFVLAALGLLDNRRAT THWAHCQTLARTYPKVMVDPDSLFVQDGPFITGAGITAGIDLALALVESDYGPAVARRVARWMVVFLQRP GGQAQFSVWAEATLPATGGLRAVVDSVVADPGADHSIAAMAARAAVSERHLVRMFREQVGMTPARFVEQA RLEAAKVLLATGDKGQDAVARRAGFGTPDTMRRTFRRNLGISPSTYRSRFRTTGIDR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5829 | - | - | 100% (338) | AraC family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_0972 | - | 5e-60 | 42.34% (333) | AraC family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_5828 | - | 1e-51 | 39.60% (303) | AraC family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1966c | - | 9e-22 | 31.21% (282) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_1008 | - | 1e-163 | 84.34% (332) | Fis family transcriptional regulator |
M. tuberculosis H37Rv | Rv1931c | - | 9e-22 | 31.21% (282) | transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4754 | - | 2e-77 | 46.06% (330) | AraC family transcriptional regulator |
M. marinum M | MMAR_2855 | - | 2e-61 | 43.03% (330) | transcriptional regulatory protein |
M. avium 104 | MAV_4981 | - | 5e-78 | 46.43% (336) | transcriptional regulator, AraC family protein |
M. smegmatis MC2 155 | MSMEG_0376 | - | 1e-157 | 81.36% (338) | transcriptional regulator, AraC family protein |
M. thermoresistible (build 8) | TH_3120 | - | 3e-42 | 40.25% (241) | PUTATIVE transcriptional regulator, AraC family with |
M. ulcerans Agy99 | MUL_2902 | - | 8e-61 | 43.03% (330) | transcriptional regulatory protein |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_5829|M.vanbaalenii_PYR-1 -------MAENS----RTVVFALYNKVTLQDVAAPLEIFARANDFGARYT Mflv_1008|M.gilvum_PYR-GCK ---MTDEFRHNADPGGKTVVFALYDKVTLQDVAAPMEIFARANDFGASYR MSMEG_0376|M.smegmatis_MC2_155 MPWNEDEGMPPVLSDPRTVVFALYDKVTLADVAAPLEIFARANDFGANYT MAB_4754|M.abscessus_ATCC_1997 --------MSDE----RLITIVVFDGMKLLDLAGPAEVFAEANRFGANYR MAV_4981|M.avium_104 --------MADSSATPRVVVIVVFDDVTMLDVAGAGEVFAEANRFGADYL TH_3120|M.thermoresistible__bu ------------------VAALVLDGLAIFEFGVICEVFG-VDRTDDGVP Mb1966c|M.bovis_AF2122/97 ------------------MVIVGFPG------------------------ Rv1931c|M.tuberculosis_H37Rv ------------------MVIVGFPG------------------------ MMAR_2855|M.marinum_M --------------MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGY MUL_2902|M.ulcerans_Agy99 --------------MARKVVTVGFPGVQPLDVVGPFEVFAGASLLSEGGY :. Mvan_5829|M.vanbaalenii_PYR-1 VLLASPTGGAVGTTAYAQLNADLPLSEVPESIDTLLVPGGVPADFNFTPG Mflv_1008|M.gilvum_PYR-GCK VLTVSPSGRPVGTTAFATLNVDVALDAAPDAFDTLLVPGGVPADFSFTPG MSMEG_0376|M.smegmatis_MC2_155 VLLASLTGTAVGTTAFAKLDANVALDEVPAAVDTLVVPGGVPAGFSFTPG MAB_4754|M.abscessus_ATCC_1997 LVVASVDGRDVSTSIGSPFSVTETIDSI-ECADTVLVAG--------GDV MAV_4981|M.avium_104 LKIASVDGRDVTTSIGTRLGVTDAVSSI-ESADTVLVAG--------SDN TH_3120|M.thermoresistible__bu PVDFTVCGPRAGQPVRTSFGATLTPDSGLDGLAG--------------AD Mb1966c|M.bovis_AF2122/97 -----------------------------DPVDTVILPG--------GAG Rv1931c|M.tuberculosis_H37Rv -----------------------------DPVDTVILPG--------GAG MMAR_2855|M.marinum_M DVALASIDERPVATGIGLEFMTTRLPDPSAPVDTVVLPG--------GGG MUL_2902|M.ulcerans_Agy99 DVALASIDERPVATGIGLEFMTTRLPDPSAPVDTVVLPG--------GGG Mvan_5829|M.vanbaalenii_PYR-1 IHDIPEEPTPDSVPDAMAMVRELAPRARRVASVCTGAFVLAALGLLDNRR Mflv_1008|M.gilvum_PYR-GCK LHDIPEEPTPDSVADACDMVRRLAPRARRIASVCTGSFVLAALGLLDGRR MSMEG_0376|M.smegmatis_MC2_155 LHDIPEEPTPDTIPDAVHLVRHLAPRARRVASVCTGAFVLAALGLLNGRR MAB_4754|M.abscessus_ATCC_1997 LIGSPLNP------TLVAALAQLQARCRRIASICTGAFLLAQAGMLDHRR MAV_4981|M.avium_104 LPRRPIDP------ELVEAVKSVADRTRRLASICTGSFILGQAGLLDGRR TH_3120|M.thermoresistible__bu LVAIPAIRQDDYLPEALDAVRAAADAGAIILTVCSGAFLAGAAGLLDGRP Mb1966c|M.bovis_AF2122/97 VDAARSEP------ALIDWVKAVSGTARRVVTVCTGAFLAAEAGLLG--R Rv1931c|M.tuberculosis_H37Rv VDAARSEP------ALIDWVKAVSGTARRVVTVCTGAFLAAEAGLLG--R MMAR_2855|M.marinum_M VDAARDNV------ALMDWVKAAAGTARRVVTVCTGTFLAAEAGLLDGCR MUL_2902|M.ulcerans_Agy99 VDAARDNV------ALMDWVKAAAGTARRVVTVCTGTFLAAEAGLLDGCR : : : ::*:*:*: . *:*. Mvan_5829|M.vanbaalenii_PYR-1 ATTHWAHCQTLARTYPKVMVDPDSLFVQ-DGPFITGAGITAGIDLALALV Mflv_1008|M.gilvum_PYR-GCK ATTHWAHCQTLARQYPAVMVDPDSLFVQ-DGPFITGAGITAGIDLALAMV MSMEG_0376|M.smegmatis_MC2_155 ATTHWAHCQTLARNYPHVRVDPDSLFVQ-DGRFFTGAGISAGTDLALALV MAB_4754|M.abscessus_ATCC_1997 ATTHWRHTGLLQRAFPNVTVEPDAIFVR-DANVFTSAGVSAGIDLALALV MAV_4981|M.avium_104 ATTHWHDVRLFARAFPEITVEPDALFVC-DGDVFTSAGISSGIDLALALV TH_3120|M.thermoresistible__bu CTTHWGLTEELARRYPTARVDRNVLYVD-DGDLITSAGTAAGIDACLHLV Mb1966c|M.bovis_AF2122/97 TPSDDALG--LCRTFRPR-ISGRSGRCRPDLHAQFAEGVDRGWSHRRHRP Rv1931c|M.tuberculosis_H37Rv TPSDDALG--LCRTFRPR-ISGRSGRCRPDLHAQFAEGVDRGWSHRRHRP MMAR_2855|M.marinum_M ATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALV MUL_2902|M.ulcerans_Agy99 ATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALV .:. : * : :. . . * * . Mvan_5829|M.vanbaalenii_PYR-1 ESDYGPAVARRVARWMVVFLQRPGGQAQFSVWAEATLPATGGLRAVVDSV Mflv_1008|M.gilvum_PYR-GCK ESDFGPAVARRVARWMVVFLQRPGGQAQFSVWAESALPVTGGLRAVVDSV MSMEG_0376|M.smegmatis_MC2_155 ESDHGPTMARRVARWMVVFLQRPGGQAQFSVWSG--LPAADGLREIMDSV MAB_4754|M.abscessus_ATCC_1997 EDDHGSEMVRDVARSLVVYLKRAGGQSQFSVFVESALPTGSALRPATDAI MAV_4981|M.avium_104 EMDYGTELVRAVARWLVVYLKRAGGQSQFSALVEAEPPPRSPLRKVTAAI TH_3120|M.thermoresistible__bu RRELGSEVTNTIARHMVVPPQRDGGQRQFIDQPIPVRHSEG-FAPHLDWI Mb1966c|M.bovis_AF2122/97 RAGTGRRRPRHRDCPDGCPLARPVSAPTRWADPVRGSGVDATRQTDLDPP Rv1931c|M.tuberculosis_H37Rv RAGTGRRRPRHRDCPDGCPLARPVSAPTRWADPVRGSGVDATRQTDLDPP MMAR_2855|M.marinum_M EGDHGTEIAQTVARWLVLYLRRPGGQ-TQFAAPVWMP--RAKRPSIRDVQ MUL_2902|M.ulcerans_Agy99 EGDHGTEIAQTVARWLVLYLRRPCGQ-TQFAAPVWMP--RAKRPSIRDVQ . * . * . Mvan_5829|M.vanbaalenii_PYR-1 VAD-----PGADHSIAAMAARAAVSERHLVRMFREQVGMTPARFVEQARL Mflv_1008|M.gilvum_PYR-GCK IAD-----PAGDHSLAAMASRAAVSERHLVRVFRDQVGMTPARFVEQARL MSMEG_0376|M.smegmatis_MC2_155 IAH-----PGAEHSLAALAARAAVSERHLVRMFREQVGMTPARFVEQARL MAB_4754|M.abscessus_ATCC_1997 AAD-----PAADHSVAKLAARAALSARQLTRLFHSELGTTPARYVELVRI MAV_4981|M.avium_104 SAD-----PAADHSVKSLSARASLSTRQLTRLFQSELGTTPARYVEMVRI TH_3120|M.thermoresistible__bu LSN-----LDKTHTVASLARRANMSPRTFARRFVEETGRTPMQWVTDQRV Mb1966c|M.bovis_AF2122/97 GAGGHRGRAGGAHRIGELAQRAAMSPRHFTRVFSDEVGEAPGRYVERIRT Rv1931c|M.tuberculosis_H37Rv GAGGHRGRAGGAHRIGELAQRAAMSPRHFTRVFSDEVGEAPGRYVERIRT MMAR_2855|M.marinum_M EA--IEAQPGGPHSIEELAHRAAMSPRHFTRVFTGEVGEAPRQYVERVRT MUL_2902|M.ulcerans_Agy99 EA--IEAQPGGPHSIEELAHRAAMSPRHFTRVFTGEVGEAPGRYVERVRT : * : :: ** :* * :.* * : * :* ::* * Mvan_5829|M.vanbaalenii_PYR-1 EAAKVLLATGDKGQDAVARRAGFGTPDTMRRTFRRNLGISPSTYRSRFRT Mflv_1008|M.gilvum_PYR-GCK EAAKVLLATGDHSQDSVARRSGFGTPDTMRRTFRRNLGISPGVYRNRFRT MSMEG_0376|M.smegmatis_MC2_155 EAAKVLLATGDQSQDAVARLVGFGSPDTMRRTFRRNLGISPGLYRNRFRT MAB_4754|M.abscessus_ATCC_1997 DAARGALDAG-STVTEAARIAGFGSAETLRRAFVSELGVSPKAYRERFRT MAV_4981|M.avium_104 DAARAALDAG-RSVAESARLAGFGSAETLRRVFVEHLGLSPKAYRDRFRT TH_3120|M.thermoresistible__bu LYARRLLEETDLDIHRIAARCGFGSTTLLRHHFRRVIGVTPSDYRRRFAC Mb1966c|M.bovis_AF2122/97 EAARRQLEETHDTVVAIAARCGFGTAETMRRSFIRRVGISPDQYRKAFA- Rv1931c|M.tuberculosis_H37Rv EAARRQLEETHDTVVAIAARCGFGTAETMRRSFIRRVGISPDQYRKAFA- MMAR_2855|M.marinum_M EAARRQLEETEDTVVAIAARCGFGTAETMRRNFIRRVGISPDQYRKAFA- MUL_2902|M.ulcerans_Agy99 EAARRQLEETEDTVVAIAARCGFGTAETMRRNFIRRVGISPDQYRKAFA- *: * * ***:. :*: * :*::* ** * Mvan_5829|M.vanbaalenii_PYR-1 TGIDR----------- Mflv_1008|M.gilvum_PYR-GCK TGVDA----------- MSMEG_0376|M.smegmatis_MC2_155 TGIDRQ---------- MAB_4754|M.abscessus_ATCC_1997 AAR------------- MAV_4981|M.avium_104 AARG------------ TH_3120|M.thermoresistible__bu GSTTSGSTESGAEVTD Mb1966c|M.bovis_AF2122/97 ---------------- Rv1931c|M.tuberculosis_H37Rv ---------------- MMAR_2855|M.marinum_M ---------------- MUL_2902|M.ulcerans_Agy99 ----------------