For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GSSRYVALLRGINVGGRNKISMPDLRAVLEDAGFGNVSTYIQSGNVAFESDGARASLESDIEALLVRLLE SPPVVVVRSHRQLRGVVEDAPGEFAERHTEHHRDVIFVKAPLTVERAMEVVQLRDGVDDAWPGPGVVYFT RVIAEKARSRMSRIVGTPEYRLMTIRNWATTTRMLTLLDEMR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5780 | - | - | 100% (183) | hypothetical protein Mvan_5780 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1185c | - | 2e-09 | 27.37% (179) | hypothetical protein Mb1185c |
M. gilvum PYR-GCK | Mflv_1050 | - | 1e-73 | 71.43% (182) | hypothetical protein Mflv_1050 |
M. tuberculosis H37Rv | Rv1154c | - | 2e-09 | 27.37% (179) | hypothetical protein Rv1154c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1293c | - | 2e-11 | 27.37% (179) | hypothetical protein MAB_1293c |
M. marinum M | MMAR_4299 | - | 2e-11 | 30.00% (180) | hypothetical protein MMAR_4299 |
M. avium 104 | MAV_1291 | - | 8e-13 | 31.49% (181) | hypothetical protein MAV_1291 |
M. smegmatis MC2 155 | MSMEG_5172 | - | 5e-13 | 32.22% (180) | hypothetical protein MSMEG_5172 |
M. thermoresistible (build 8) | TH_0459 | - | 7e-10 | 30.05% (183) | HYPOTHETICAL PROTEIN Rv1154c |
M. ulcerans Agy99 | MUL_0995 | - | 2e-11 | 29.44% (180) | hypothetical protein MUL_0995 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5172|M.smegmatis_MC2_155 -------------------------------------MTRYAAFLRGVNV TH_0459|M.thermoresistible__bu ----------------------------------MVFVARYVAFLRGVNV Mb1185c|M.bovis_AF2122/97 MEFPLITANSLSSKTWRAMPRAYVAVASFSGGLVQSGMAKFAAFLRGVNV Rv1154c|M.tuberculosis_H37Rv MEFPLITANSLSSKTWRAMPRAYVAVASFSGGLVQSGMAKFAAFLRGVNV MAV_1291|M.avium_104 ----MVVTG----------P-----------GWWNRGMTEYAAFLRGVNV MMAR_4299|M.marinum_M -------------------------------------MTQFAAFLRGVNV MUL_0995|M.ulcerans_Agy99 ------MRGSLT-------------------AWCNRIMTQFAAFLRGVNV MAB_1293c|M.abscessus_ATCC_199 -------------------------------------MTKYAALLRGVNV Mvan_5780|M.vanbaalenii_PYR-1 -----------------------------------MGSSRYVALLRGINV Mflv_1050|M.gilvum_PYR-GCK -----------------------------------MGSTRYAALLRGINV :.:.*:***:** MSMEG_5172|M.smegmatis_MC2_155 GGIN-IKMA----ELARVLTDAGFDDVRTILASGNVLLDSASDADGVRET TH_0459|M.thermoresistible__bu GGVN-LKMASGDDSVAAVFTAAGFSAVRTVLATGNVILDSAARPDTVRAT Mb1185c|M.bovis_AF2122/97 GGVN-LKMA----EVATALTDAGFCNVRTILASGNVLLESTCGAAEVREK Rv1154c|M.tuberculosis_H37Rv GGVN-LKMA----EVATALTDAGFCNVRTILASGNVLLESTCGAAEVREK MAV_1291|M.avium_104 GGVN-LKMA----DVKKALTDAGFTAVRTVLASGNVLLQSKAGAAAVRAK MMAR_4299|M.marinum_M GGVN-LKMA----EVTAALTDAGFTNVRTILASGNVLLEAPGDATTVRQS MUL_0995|M.ulcerans_Agy99 GGVN-LKMA----EVTAALTDAGFTNLRTILASGNVLLEAPGDATTVRQS MAB_1293c|M.abscessus_ATCC_199 GGIT-MKMA----DVRDALETAGFAGVTTVLASGNVLLDADEPAATVKER Mvan_5780|M.vanbaalenii_PYR-1 GGRNKISMP----DLRAVLEDAGFGNVSTYIQSGNVAFESDGARASLESD Mflv_1050|M.gilvum_PYR-GCK GGRNKITMA----DLRAAFSEAGFGGVSTYIQSGNVAFESGRRRASLESD ** . :.*. .: .: *** : * : :*** ::: :. MSMEG_5172|M.smegmatis_MC2_155 AERALREAFGYEAWVLVYDLGQLARISAAYP--FEREVEDHHSYVTFVSD TH_0459|M.thermoresistible__bu AERALRDRFGYDAWVLVYPFDDVAAISAAFP--FERVIPDHHSYVTFVSD Mb1185c|M.bovis_AF2122/97 TEATLRERFGYDAWALIYDVDTVRTIVAAYP--FECELEGYQSYVTFVAD Rv1154c|M.tuberculosis_H37Rv TEATLRERFGYDAWALIYDVDTVRTIVTAYP--FECELEGYQSYVTFVAD MAV_1291|M.avium_104 AEAALRERFGYDAWVLVYDLDTVRRVVDGYP--FEREVDGYQSYVTFVAD MMAR_4299|M.marinum_M AESTLRNKFGYDAWVLVYDIETVRTINEAYP--FEREVDGLQSYVTFVSD MUL_0995|M.ulcerans_Agy99 AESTLRNKFGYNAWVLVYDIETVRTINEAYP--FEREVDGLQSYVTFVSD MAB_1293c|M.abscessus_ATCC_199 LQQVLGERFGYEAWVLVYDLDTIARIIAAFP--WEPEIEGVHSYVMFCSD Mvan_5780|M.vanbaalenii_PYR-1 IEALLVRLLESPPVVVVRSHRQLRGVVEDAPGEFAERHTEHHRDVIFVKA Mflv_1050|M.gilvum_PYR-GCK IETLLADRLQSPPVVVVRSHAEMRAIVEEAPADFVARTVDHRRDVVFLKE : * : . .:: : : * : : * * MSMEG_5172|M.smegmatis_MC2_155 PAVLDELAALP--PGPGEQVRRGD---GVLYWQVPRTATLDSAIGKTMGK TH_0459|M.thermoresistible__bu PQVLDELAALD--PGPGEQIAPGD---RVVYWQVRRTQTLTSAMGKTMGK Mb1185c|M.bovis_AF2122/97 AAILDELSALADTAGPDENISRGPDPLGVLYWQVPKGSTLDSTIGQTMGK Rv1154c|M.tuberculosis_H37Rv AAILDELSALADTAGPDENISRGPDPLGVLYWQVPKGSTLDSTIGQTMGK MAV_1291|M.avium_104 AAVLDELAALP--AGPDERIRRGPDPLGVLYWQVPKGSTLDSTIGKTMGK MMAR_4299|M.marinum_M DSVLDELAALT--AGANEKIHRGD---GVIYWQVPKGATLDSTIGRTMGK MUL_0995|M.ulcerans_Agy99 DSVLDELAALT--TGANEKIHRGD---GVIYWQVPKGATLDSTIGRTMGK MAB_1293c|M.abscessus_ATCC_199 PVVLTELAALESELDESEQIAAGD---GVLYWQVPKSQTLGSPVGKTTGK Mvan_5780|M.vanbaalenii_PYR-1 PLTVERAMEVVQLRDGVDDAWPGP---GVVYFTRVIAEKARSRMSRIVGT Mflv_1050|M.gilvum_PYR-GCK PLTADRALEVIQVRDGVDEVWPGP---GVVYFTRVSAERTRSMMNRIVGK . : . : * *:*: * :.: *. MSMEG_5172|M.smegmatis_MC2_155 KRYKSSTTTRNLRTLDKVLR------ TH_0459|M.thermoresistible__bu KRYKSSTTTRNLRTLERIVG------ Mb1185c|M.bovis_AF2122/97 KRYKSSTTTRNLRTLAKVLR------ Rv1154c|M.tuberculosis_H37Rv KRYKSSTTTRNLRTLAKVLR------ MAV_1291|M.avium_104 PRYKSSTTTRNLRTLVKVLS------ MMAR_4299|M.marinum_M KRYKASTTTRNLRTLDKVLR------ MUL_0995|M.ulcerans_Agy99 KRYKASTTTRNLRTLDKVLR------ MAB_1293c|M.abscessus_ATCC_199 KRYKSTTTTRNLRTLHKLVR------ Mvan_5780|M.vanbaalenii_PYR-1 PEYR-LMTIRNWATTTRMLTLLDEMR Mflv_1050|M.gilvum_PYR-GCK PEYR-LMTIRNWATTSQMLSILDGMG .*: * ** * :::