For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DSDTRQSRIVEFARTRGRVDVASLATELDVASETIRRDLKVLAGRRLLKRVHGGAVPLETAAFESGVEYR SQVDLAQKHRIAAAATGLLHGAETVYLDEGFTPRLIAERIAEQELTVVTSSLLAAEALAHSRTVTVLLLG GRMRGRTLATVDHWAVDMLSSLVIDVAFLGTNGISLEHGLTTPDPAVAAVKGTAVRVARRPVLVAAHSKF GESSFCRFARIEDFEAIVTGQELGAEEARRYEELGPVLIRV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5588 | - | - | 100% (252) | DeoR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_0096 | - | 8e-42 | 41.83% (251) | DeoR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_2626 | - | 6e-26 | 34.05% (232) | DeoR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1220 | - | 1e-128 | 93.63% (251) | DeoR family transcriptional regulator |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0087 | - | 4e-42 | 42.11% (247) | glucitol operon repressor |
M. thermoresistible (build 8) | TH_3302 | - | 2e-25 | 32.20% (236) | PUTATIVE putative glucitol operon repressor |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_5588|M.vanbaalenii_PYR-1 MDSDTRQSRIVEFARTRGRVDVASLATELDVASETIRRDLKVLAGRRLLK Mflv_1220|M.gilvum_PYR-GCK MDSDTRQSRIVEFARTRGRVEVASLATELDVASETIRRDLKVLAGRRLLK MSMEG_0087|M.smegmatis_MC2_155 MYAEERQQAIAALVLSRGRASVAELAQAYDVTTETVRRDLAVLDRAGVVR TH_3302|M.thermoresistible__bu LLASDRRREIFNRLVREGYVEAKELAEELGVDASTIRRDLDTLARSGQVK : :. *: * .* ... .** .* :.*:**** .* :: Mvan_5588|M.vanbaalenii_PYR-1 RVHGGAVPLET-AAFESGVEYRSQVDLAQKHRIAAAATGLLHG-AETVYL Mflv_1220|M.gilvum_PYR-GCK RVHGGAVPLET-AAFESGVEYRSQVDLSQKHRIAAAATELLHG-AETVYL MSMEG_0087|M.smegmatis_MC2_155 RVHGGAVPVRTLHLVEAGVGERDSTRAEQKDAIAAAAAEFFPPTGSSVLL TH_3302|M.thermoresistible__bu RTHGGARTVPG-VSADLPYSMKETARLDQKAAIAGVAVQRVRD-GDTVVL *.**** .: : :. . ** **..*. . ..:* * Mvan_5588|M.vanbaalenii_PYR-1 DEG-FTPRLIAERIAEQELTVVTSSLLAAEALAHSRTVTVLLLGGRMRGR Mflv_1220|M.gilvum_PYR-GCK DEG-FTPRLIAERLAEQELTVVTSSLLAAEALAHSRTVTVLLLGGRMRGR MSMEG_0087|M.smegmatis_MC2_155 DAGTTTARVAAHLPTDRELTIVTNSVPIASRVAAMPNVTLQLLGGRVRGL TH_3302|M.thermoresistible__bu DSGSTTYEIAVRLRNHEDLTVITNDLRIATFIADLRRFRLLVAGGELLGS * * * .: .. ..:**::*..: * :* . : : **.: * Mvan_5588|M.vanbaalenii_PYR-1 TLATVDHWAVDMLSSLVIDVAFLGTNGISLEHGLTTPDPAVAAVKGTAVR Mflv_1220|M.gilvum_PYR-GCK TLATVDHWAVDMLSSLVIDVAFLGTNGISLDHGLTTPDPAVAAVKGTAVR MSMEG_0087|M.smegmatis_MC2_155 TQAAVGEQALRVLDALRVDIAFIGTNAISLRHGLSTPDTDEAAVKRAMVS TH_3302|M.thermoresistible__bu VYTLTGRRTVEFLLDYAADWTFLGADAVDAAAGITNTNTLEIPVKRAMLE . : ... :: .* * :*:*::.:. *::..:. .** : : Mvan_5588|M.vanbaalenii_PYR-1 VARRPVLVAAHSKFGESSFCRFARIEDFEAIVTGQELGAEEARRYEELGP Mflv_1220|M.gilvum_PYR-GCK VARRPILVAAHSKFGESSFCRFAQIGDFEAIVSGHELSAEDARRYEAVGP MSMEG_0087|M.smegmatis_MC2_155 AANYVVVVADSSKMGQEDLIRFAPIDCVDTLITDAEIDPADRDGLTEQGV TH_3302|M.thermoresistible__bu VAATTVVVADSSKFGHRALAKVADLDEVDEIITDSDLPSDSVDVFGKNLI .* ::** **:*. : :.* : .: :::. :: . . Mvan_5588|M.vanbaalenii_PYR-1 VLIRV----- Mflv_1220|M.gilvum_PYR-GCK AVIRA----- MSMEG_0087|M.smegmatis_MC2_155 EVVIA----- TH_3302|M.thermoresistible__bu TVADPAPTPG :