For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AALLPLFAPAAAAQPQTTLVDLVDAATRRLQVAEPIAANKFHTGGLIEDPVREQQVLDAVSAEATALDLD PAYVTTAFRDQIDATVAIEYSRLAQWKFDPATAPVDAPDLASSRGIIDALNREMVTLMADEWDKLHAPTC RAELDQAKATVAAQRGLDPLYRQAVDHATRNYCR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_5080 | - | - | 100% (175) | chorismate mutase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1917c | - | 3e-39 | 45.14% (175) | chorismate mutase |
| M. gilvum PYR-GCK | Mflv_1673 | - | 3e-79 | 82.29% (175) | chorismate mutase |
| M. tuberculosis H37Rv | Rv1885c | - | 3e-39 | 45.14% (175) | chorismate mutase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2773 | - | 2e-33 | 47.56% (164) | hypothetical protein MMAR_2773 |
| M. avium 104 | MAV_2817 | - | 5e-41 | 49.43% (176) | chorismate mutase |
| M. smegmatis MC2 155 | MSMEG_2111 | - | 5e-51 | 54.29% (175) | chorismate mutase |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2974 | - | 1e-34 | 47.73% (176) | chorismate mutase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1917c|M.bovis_AF2122/97 -MLTRPREIYLATAVSIGILLSLIAP-LGPP-LARADGTSQLAELVDAAA
Rv1885c|M.tuberculosis_H37Rv -MLTRPREIYLATAVSIGILLSLIAP-LGPP-LARADGTSQLAELVDAAA
MMAR_2773|M.marinum_M MVFPARRSTRHLLGVGLGGAATLLAVALGAPGQVRADSASPLSTLVDAAA
MUL_2974|M.ulcerans_Agy99 MVFPARRSTRHRLGVGLGGAAALLAVALGAPGQVRADSASPLITLVDAAA
MAV_2817|M.avium_104 -----------MVVVGCLVTGALAGAFAVPAAKARADTADPLTELVDTAV
Mvan_5080|M.vanbaalenii_PYR-1 ----------------------MAALLPLFAPAAAAQPQTTLVDLVDAAT
Mflv_1673|M.gilvum_PYR-GCK --------MMYPMTRLLASAAALSALALLVAPAASAQPDATLVDLVDAAA
MSMEG_2111|M.smegmatis_MC2_155 ----------------MLASVALAALAGVGTPHATADDASPLVPLVDAAA
: . . . *: * ***:*.
Mb1917c|M.bovis_AF2122/97 ERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRV
Rv1885c|M.tuberculosis_H37Rv ERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRV
MMAR_2773|M.marinum_M QRLAVADPVAAFKWHARVAIEDPDRVQQQLAKLGDAARAAQVDPNYVTRV
MUL_2974|M.ulcerans_Agy99 QRLAVADPVAAFKWHARVAIEDPDRVQQQLAKLGDAARAAQVDPNYVTRL
MAV_2817|M.avium_104 QRLQLAEPVAAYKWNSHGAVEDPARVAQQLALLGDQAAAENIDRDYVTRV
Mvan_5080|M.vanbaalenii_PYR-1 RRLQVAEPIAANKFHTGGLIEDPVREQQVLDAVSAEATALDLDPAYVTTA
Mflv_1673|M.gilvum_PYR-GCK RRLQVADPIAANKFHTGGLIQDPAREQVVLDAVSAEAAELGIDPSYVTTA
MSMEG_2111|M.smegmatis_MC2_155 QRLQTADPVAASKFRSGGAIDDPDREQQVIAAVTGDATRHNIDPGYVHDV
.** *:*:** *:.: ::*. * : : * :* **
Mb1917c|M.bovis_AF2122/97 FDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQ
Rv1885c|M.tuberculosis_H37Rv FDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQ
MMAR_2773|M.marinum_M FGDQISATEAIEYSRFADWKFGSADVPAAPPDLSASRAEIDALNDKILSQ
MUL_2974|M.ulcerans_Agy99 FGDQISATEAIEYSRFADWKFGSADVPAAPPDLSASRAEIDALNDKILSQ
MAV_2817|M.avium_104 FGDQIRATEAIEYSRFASWKLNPGEAPADAPDLTASRAAIDDLSRTMLTA
Mvan_5080|M.vanbaalenii_PYR-1 FRDQIDATVAIEYSRLAQWKFDPATAPVDAPDLASSRGIIDALNREMVTL
Mflv_1673|M.gilvum_PYR-GCK FRDQIDATVAIEYTRLAQWTFDPAVAPADAPDLASSREIIDALNREMVTL
MSMEG_2111|M.smegmatis_MC2_155 FRNQIDATSSVEHTRFAQWKLDPAAAPSSAPDLSESRQKIDTLNRTMVDE
* :** ** ::*::*::.*.:... .* .***: ** ** *. ::
Mb1917c|M.bovis_AF2122/97 IWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALP
Rv1885c|M.tuberculosis_H37Rv IWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALP
MMAR_2773|M.marinum_M ITLNRSLLESASCATQLDLARADAIRARQLDSLYQRALLTATRSYCPAGD
MUL_2974|M.ulcerans_Agy99 ITLNRSLLESASCAAQLDLARADTIRARQLDSLYQRALLTATRSYCPAGG
MAV_2817|M.avium_104 LAADWPLLHSPACAALLADARRAVVGDRRLDTLYQRALTSATQSYCQQ--
Mvan_5080|M.vanbaalenii_PYR-1 MADEWDKLHAPTCRAELDQAKATVAAQRGLDPLYRQAVDHATRNYCR---
Mflv_1673|M.gilvum_PYR-GCK MADEWGKLHSPGCRAELDQAKATVAQERGLDPLYRQGIDLATRNYCR---
MSMEG_2111|M.smegmatis_MC2_155 IARQWPVLHSPVCRPDLDRALDAVATARGFDPVYRHALEYATHSYCR---
: . * :. * . * * * :*.:*::.: **:.**
Mb1917c|M.bovis_AF2122/97 PA
Rv1885c|M.tuberculosis_H37Rv PA
MMAR_2773|M.marinum_M HA
MUL_2974|M.ulcerans_Agy99 QA
MAV_2817|M.avium_104 --
Mvan_5080|M.vanbaalenii_PYR-1 --
Mflv_1673|M.gilvum_PYR-GCK --
MSMEG_2111|M.smegmatis_MC2_155 --