For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLASVALAALAGVGTPHATADDASPLVPLVDAAAQRLQTADPVAASKFRSGGAIDDPDREQQVIAAVTGD ATRHNIDPGYVHDVFRNQIDATSSVEHTRFAQWKLDPAAAPSSAPDLSESRQKIDTLNRTMVDEIARQWP VLHSPVCRPDLDRALDAVATARGFDPVYRHALEYATHSYCR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_2111 | - | - | 100% (181) | chorismate mutase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1917c | - | 6e-41 | 46.41% (181) | chorismate mutase |
| M. gilvum PYR-GCK | Mflv_1673 | - | 3e-51 | 54.75% (179) | chorismate mutase |
| M. tuberculosis H37Rv | Rv1885c | - | 6e-41 | 46.41% (181) | chorismate mutase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2773 | - | 1e-35 | 45.56% (180) | hypothetical protein MMAR_2773 |
| M. avium 104 | MAV_2817 | - | 5e-42 | 49.44% (180) | chorismate mutase |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2974 | - | 5e-36 | 45.76% (177) | chorismate mutase |
| M. vanbaalenii PYR-1 | Mvan_5080 | - | 5e-51 | 54.29% (175) | chorismate mutase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1917c|M.bovis_AF2122/97 -MLTRPREIYLATAVSIGILLSLIAP-LGPP-LARADGTSQLAELVDAAA
Rv1885c|M.tuberculosis_H37Rv -MLTRPREIYLATAVSIGILLSLIAP-LGPP-LARADGTSQLAELVDAAA
MMAR_2773|M.marinum_M MVFPARRSTRHLLGVGLGGAATLLAVALGAPGQVRADSASPLSTLVDAAA
MUL_2974|M.ulcerans_Agy99 MVFPARRSTRHRLGVGLGGAAALLAVALGAPGQVRADSASPLITLVDAAA
MAV_2817|M.avium_104 -----------MVVVGCLVTGALAGAFAVPAAKARADTADPLTELVDTAV
Mflv_1673|M.gilvum_PYR-GCK --------MMYPMTRLLASAAALSALALLVAPAASAQPDATLVDLVDAAA
Mvan_5080|M.vanbaalenii_PYR-1 ----------------------MAALLPLFAPAAAAQPQTTLVDLVDAAT
MSMEG_2111|M.smegmatis_MC2_155 ----------------MLASVALAALAGVGTPHATADDASPLVPLVDAAA
: . . . *: * ***:*.
Mb1917c|M.bovis_AF2122/97 ERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRV
Rv1885c|M.tuberculosis_H37Rv ERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRV
MMAR_2773|M.marinum_M QRLAVADPVAAFKWHARVAIEDPDRVQQQLAKLGDAARAAQVDPNYVTRV
MUL_2974|M.ulcerans_Agy99 QRLAVADPVAAFKWHARVAIEDPDRVQQQLAKLGDAARAAQVDPNYVTRL
MAV_2817|M.avium_104 QRLQLAEPVAAYKWNSHGAVEDPARVAQQLALLGDQAAAENIDRDYVTRV
Mflv_1673|M.gilvum_PYR-GCK RRLQVADPIAANKFHTGGLIQDPAREQVVLDAVSAEAAELGIDPSYVTTA
Mvan_5080|M.vanbaalenii_PYR-1 RRLQVAEPIAANKFHTGGLIEDPVREQQVLDAVSAEATALDLDPAYVTTA
MSMEG_2111|M.smegmatis_MC2_155 QRLQTADPVAASKFRSGGAIDDPDREQQVIAAVTGDATRHNIDPGYVHDV
.** *:*:** *:.: ::*. * : : * :* **
Mb1917c|M.bovis_AF2122/97 FDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQ
Rv1885c|M.tuberculosis_H37Rv FDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQ
MMAR_2773|M.marinum_M FGDQISATEAIEYSRFADWKFGSADVPAAPPDLSASRAEIDALNDKILSQ
MUL_2974|M.ulcerans_Agy99 FGDQISATEAIEYSRFADWKFGSADVPAAPPDLSASRAEIDALNDKILSQ
MAV_2817|M.avium_104 FGDQIRATEAIEYSRFASWKLNPGEAPADAPDLTASRAAIDDLSRTMLTA
Mflv_1673|M.gilvum_PYR-GCK FRDQIDATVAIEYTRLAQWTFDPAVAPADAPDLASSREIIDALNREMVTL
Mvan_5080|M.vanbaalenii_PYR-1 FRDQIDATVAIEYSRLAQWKFDPATAPVDAPDLASSRGIIDALNREMVTL
MSMEG_2111|M.smegmatis_MC2_155 FRNQIDATSSVEHTRFAQWKLDPAAAPSSAPDLSESRQKIDTLNRTMVDE
* :** ** ::*::*::.*.:... .* .***: ** ** *. ::
Mb1917c|M.bovis_AF2122/97 IWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALP
Rv1885c|M.tuberculosis_H37Rv IWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALP
MMAR_2773|M.marinum_M ITLNRSLLESASCATQLDLARADAIRARQLDSLYQRALLTATRSYCPAGD
MUL_2974|M.ulcerans_Agy99 ITLNRSLLESASCAAQLDLARADTIRARQLDSLYQRALLTATRSYCPAGG
MAV_2817|M.avium_104 LAADWPLLHSPACAALLADARRAVVGDRRLDTLYQRALTSATQSYCQQ--
Mflv_1673|M.gilvum_PYR-GCK MADEWGKLHSPGCRAELDQAKATVAQERGLDPLYRQGIDLATRNYCR---
Mvan_5080|M.vanbaalenii_PYR-1 MADEWDKLHAPTCRAELDQAKATVAAQRGLDPLYRQAVDHATRNYCR---
MSMEG_2111|M.smegmatis_MC2_155 IARQWPVLHSPVCRPDLDRALDAVATARGFDPVYRHALEYATHSYCR---
: . * :. * . * * * :*.:*::.: **:.**
Mb1917c|M.bovis_AF2122/97 PA
Rv1885c|M.tuberculosis_H37Rv PA
MMAR_2773|M.marinum_M HA
MUL_2974|M.ulcerans_Agy99 QA
MAV_2817|M.avium_104 --
Mflv_1673|M.gilvum_PYR-GCK --
Mvan_5080|M.vanbaalenii_PYR-1 --
MSMEG_2111|M.smegmatis_MC2_155 --