For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLAASDIFAGPIVRRSSPPRIAVWLATTKPVELDGLVRKAGTAEWIGQTTTVDRIKLFDGLFAYLVQIAP TAGHFPTGTLLEYSLGTVGKDGEADHSWFKSVVAEDGLAYPGFELPTLYLQAAGAKLNVLYGSCRKPHDI DGGDNDALAYGDSLVLNNVTTLAARPTILCLAGDQIYADDVHDATFDAINTVATKLEGSTPEKMPNGATV PGRGQRLKWTTDKAGFTSGEAANHLVTFAEYVAHYGLAWNRRNWPTVSVAKEVVSYRDGLPAVRRLMANT PTYMMFDDHDVTDDWNFSINWAAQVKSSAVGTRIITNALAAYWIFQAWGNDPKVSARETPHMRDALAKRL TDPVELETVVGTKSTLNEWEFQTPTIPVLYFLDTRTNRGYKDDFKRADGGEPAFLKSAAAWLPTRDRLNK IVDVQQRSVPLVLVTAAPVFGFETIDSAQMAVSGKIVPTSYFDLEGWAANRAHLFLFLTLCRDHDVVVLS GDVHYAFTSTASFAVFDAAFVRGAAARVPGMTLPGVSGSTATNAHLYTSRFVQLNSSGTRNSVGGWGKTK MMSGMANNQGESGYMFAGNPMSPEPARFKNGRLYTPITVMGVTVWRERDLADVQPNFVYEQRINDPGNTR FINKHNLGYAQFLGRKVQNGFLVDGKLDPSNSTSFDFGSGAAWTPAAP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5029 | - | - | 100% (678) | hypothetical protein Mvan_5029 |
M. vanbaalenii PYR-1 | Mvan_3791 | - | 4e-17 | 25.99% (531) | hypothetical protein Mvan_3791 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2747 | - | 2e-18 | 25.90% (529) | hypothetical protein Mflv_2747 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2145 | - | 5e-14 | 24.48% (335) | hypothetical protein MMAR_2145 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_4164 | - | 1e-17 | 24.53% (534) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2747|M.gilvum_PYR-GCK --MSVTLVLGPVLRHVGESTAAVWVQTDAPAEVEVLGCSARTFQVQEHHY TH_4164|M.thermoresistible__bu ----MGLLLGPVLRHVSETTAQVWVQTDRPATVSVLGCSASTFQVQDYHY MMAR_2145|M.marinum_M ---MAELVLGPLLRHVGECDATVWVETSKPCEVEILGHRERAWTVAGHHY Mvan_5029|M.vanbaalenii_PYR-1 MLAASDIFAGPIVRRSSPPRIAVWLATTKPVELDGLVRKAGTAEWIGQTT :. **::*: . **: * * :. * : Mflv_2747|M.gilvum_PYR-GCK ALVPITGLT-----------------PDSVHEYQVRIDG-----EIVWPE TH_4164|M.thermoresistible__bu ALVPVTGLT-----------------PGTTTRYEVHVDG-----ERVWPL MMAR_2145|M.marinum_M ALVVVRGLQ-----------------ADSSTPYEVHLDG-----NRVWPL Mvan_5029|M.vanbaalenii_PYR-1 TVDRIKLFDGLFAYLVQIAPTAGHFPTGTLLEYSLGTVGKDGEADHSWFK :: : : ..: *.: * : * Mflv_2747|M.gilvum_PYR-GCK PDS----------EFPPSVIRTRGPAGAHRLKVVFGSCRYPKTGVQKLDD TH_4164|M.thermoresistible__bu PDSSFPPDSSPPVSFPPSVIRTRGPESAHRARAVFGSCRYPKTGVDDVDD MMAR_2145|M.marinum_M PDA-----------VRLSTIRTLN--NRDSLDLVFGSCRFATLTATAGNT Mvan_5029|M.vanbaalenii_PYR-1 SVVAEDGLAYPGFELPTLYLQAAG----AKLNVLYGSCRKPHDIDGGDND . . ::: . ::**** . : Mflv_2747|M.gilvum_PYR-GCK KLGLDALDCYAERLTATPVDEWPDALLLLGDQVYADELTPEARRNLSGRR TH_4164|M.thermoresistible__bu KLGHDALDRYAARMAQQPVDDWPDMLVLLGDQVYADELTPEARRQLTGRR MMAR_2145|M.marinum_M HFNADALDALAWRMYEQPPDRWPDALLLLGDQIYADDLSPETLRCVIDRR Mvan_5029|M.vanbaalenii_PYR-1 ALAYGDSLVLNN---VTTLAARPTILCLAGDQIYADDVHDATFDAINTVA : . . * * * ***:***:: : : Mflv_2747|M.gilvum_PYR-GCK QTK--------------------------------RRPPDEVVTFDEYEG TH_4164|M.thermoresistible__bu RRKQ----------------------------TRTKRPPDEVVSFTEYER MMAR_2145|M.marinum_M GID--------------------------------DPHSAEVRDFEEYTW Mvan_5029|M.vanbaalenii_PYR-1 TKLEGSTPEKMPNGATVPGRGQRLKWTTDKAGFTSGEAANHLVTFAEYVA . .: * ** Mflv_2747|M.gilvum_PYR-GCK LYRHTWGD-------------------PEIRWILSTLPTAMIFDDHDIRD TH_4164|M.thermoresistible__bu LYRHSWTD-------------------PEIRWIMSTVPTAMIFDDHDIRD MMAR_2145|M.marinum_M LYAESWSD-------------------PQVRWLLSTVPTSMIFDDHDVHD Mvan_5029|M.vanbaalenii_PYR-1 HYGLAWNRRNWPTVSVAKEVVSYRDGLPAVRRLMANTPTYMMFDDHDVTD * :* * :* :::. ** *:*****: * Mflv_2747|M.gilvum_PYR-GCK DWNTSAPWRAEVNEKPWWRDRIHAGLGSYWVYQHIGNLSPEELASDEDYQ TH_4164|M.thermoresistible__bu DWNTSGRWREEMSAQPWWRERIRAGLASYWVYQHIGNLSPEQLEEDPDYQ MMAR_2145|M.marinum_M DWNTSQSWRQEIQATPWWKERIVSALSSYWVYQHLGNLTPAALAEDELYQ Mvan_5029|M.vanbaalenii_PYR-1 DWNFSINWAAQVKSSAVGTRIITNALAAYWIFQAWGNDPKVSARETPHMR *** * * ::. . * .*.:**::* ** . . : Mflv_2747|M.gilvum_PYR-GCK KVLAN----DGDCWPHLVELADRADYEVDG-------------DKGLRFS TH_4164|M.thermoresistible__bu RIRGI----DGDAWPALVELADRADAEVDA-------------NKGVRFS MMAR_2145|M.marinum_M RVRAH----PGDAAPLIRQFATAADEEADG-------------GKGAQWS Mvan_5029|M.vanbaalenii_PYR-1 DALAKRLTDPVELETVVGTKSTLNEWEFQTPTIPVLYFLDTRTNRGYKDD . : . : : : * : .:* : . Mflv_2747|M.gilvum_PYR-GCK FRWDLGRSRLIMVDSRNARILDSGERKMLGDRE----FRWLEDQVNDDLG TH_4164|M.thermoresistible__bu YRWDLGCTRFIMMDSRNGRILDSGERMMLGEKE----FRWVEEQAADGIE MMAR_2145|M.marinum_M YRRDLGNTRLLVIDTRCGRILSAGRRSMLSENE----FSWIEQQTG---G Mvan_5029|M.vanbaalenii_PYR-1 FKRADGGEPAFLKSAAAWLPTRDRLNKIVDVQQRSVPLVLVTAAPVFGFE :: * :: .: . ::. .: : : Mflv_2747|M.gilvum_PYR-GCK TVDHLLIGSSLPWLLPPALGDVQTINEIAAD--RDGLRGKLAETIRQTAD TH_4164|M.thermoresistible__bu NVEHLVLGSSVPWLMPPALADLQAVNELAAD--RPGWRGALAEKIRQGAD MMAR_2145|M.marinum_M DYDHLLVGSSLPWLLPRTLHDLESWDEHLASGARGRLLAGWAEKLRRAAD Mvan_5029|M.vanbaalenii_PYR-1 TIDSAQMAVSG-KIVPTSYFDLEGWAANRAHLFLFLTLCRDHDVVVLSGD : :. * ::* : *:: * : : .* Mflv_2747|M.gilvum_PYR-GCK LEHWPAFLKSFLRLSALIE--SAADHSSTGPATVSVLSGDVHHSYAARAD TH_4164|M.thermoresistible__bu LEHWPAFMKSFLRLTTMIR--AAADHP-DGPATVTVLSGDVHHSYAARAD MMAR_2145|M.marinum_M LEHWAAFGESFDRLTRLFSRVSRGQVSGPAPATICVLSGDVHHAYVAQAR Mvan_5029|M.vanbaalenii_PYR-1 VHYAFTSTASFAVFDAAFVRGAAARVPGMTLPGVSGSTATNAHLYTSRFV :.: : ** : : : . . . : :. * *.:: Mflv_2747|M.gilvum_PYR-GCK FP--GKHATRVHQLVCSPVHN-----------------YVPAPLKPFFRL TH_4164|M.thermoresistible__bu FDGLGADAAAVHQLVCSPVHN-----------------YVPAFVKPVFAL MMAR_2145|M.marinum_M FS--EPVHSRVYQLTCSPLHN-----------------YVPAAMKMAFRI Mvan_5029|M.vanbaalenii_PYR-1 QLNSSGTRNSVGGWGKTKMMSGMANNQGESGYMFAGNPMSPEPARFKNGR * : : . * : Mflv_2747|M.gilvum_PYR-GCK VWSPRLARVTRRWARRAG-SPDLPMSWRN-LSGPLFGNTIASLNVSGRDA TH_4164|M.thermoresistible__bu GWSRRLAPLTRRWARRHG-VPALPLTWTN-TCGPIFGNTIATLRVDGPQA MMAR_2145|M.marinum_M SWSRVTERATRFLLNRVSTVPPPPIDWDP-IAGPFFGDQVATLRVRGRTI Mvan_5029|M.vanbaalenii_PYR-1 LYTPITVMGVTVWRERDLADVQPNFVYEQRINDPGNTRFINKHNLGYAQF :: . .* : : .* : . .: Mflv_2747|M.gilvum_PYR-GCK EVVFEQP--RDDGS--LTSVITVSLTD------------ TH_4164|M.thermoresistible__bu EVVFEQP--DDAGD--LGRVARVGLTGSAASPPISPAAR MMAR_2145|M.marinum_M GVVLEQAGTDDTGHPRLRMVADIALA------------- Mvan_5029|M.vanbaalenii_PYR-1 LGRKVQNGFLVDGKLDPSNSTSFDFGSGAAWTPAAP--- * * . :