For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NTLKRINPSIPVLLALMALTAVLRLINIAGSPIRLDDEGTYVAQAFAMIQWGELAHYTYWYDHPPAGWLQ LAGWMLLTGPGFGGNAVTAGRYLMVVVAVVGTGLLWLLARRIGMTRPAAAAAVTVLAVSPLAISLSRAVY LDNLAVAWMLAGLVLVCSPRHRLSAMLGAAACFGIAVLTKETMLLFLPMVAWLVWTKTAPATRRYALTVF GTVFALVVSIYALMALVRGELIPGPGHVSLWEGVKFQLWQREASGSIGDPQSLKRHTIDEWLRLDPVLPL LAAPIALSALLIQRLRPYALGLLILVVTVLRPGYLPVPFVIAALPLIALLAAGLGEEGVRRLRRGGQIAP RFGSRIRVTAALATAFAAAMLVALWVPSHDTVLSADDDAAMRQAQSWVAANVPEEDRLIVDDAMWVDLVR DGRDRHNVIWSYKVDTDEQVQNLAPDGWADYGWVVSTPSMRANMPDSGVLTDAMWHARPAATFGSGGERV DVLRVDSGGAPAARPAVPDFGVQVAARLHPDSDPDALADLQSGVVDQRTVATLSMLVSRQPVVLQSISGV AAEEVAGTARREFRLGGPRDQLQAAAGFIERQRSPFGAETVQLSDNGLTVRFPARATDVGLGSRPDPVPA GPPAAVRIVDMRRGQAADRLEFVHVDGTPVGSVRPGTGSPSDYRALPGGTYVMSTVADRGGVPVMRQAFT VAPGATYTLALFSAGETGEIAAQLAPDGPVSGSSVRLLQAAAAAGPVKLALAAPGADPTVLADNASYGLI TGYGAEPAGAYDAVVTAGGREWRQPVELTDGTPTTLVVTDGRDGPAVHQTRDVAAAAAPLDPPAPGAPAV APIPDKNPSKTVAAGGDPRQKVLPLAACATVIAALAWALTRYQRRQGQWRGHGESVA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4862 | - | - | 100% (898) | glycosyl transferase family protein |
M. vanbaalenii PYR-1 | Mvan_2552 | - | 1e-05 | 29.41% (170) | hypothetical protein Mvan_2552 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4294 | - | 3e-05 | 26.47% (238) | hypothetical protein MMAR_4294 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_0709 | - | 5e-05 | 31.82% (154) | Possible conserved integral membrane protein |
M. ulcerans Agy99 | MUL_1004 | - | 3e-05 | 26.03% (242) | hypothetical protein MUL_1004 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4294|M.marinum_M -------------------------------------------------- MUL_1004|M.ulcerans_Agy99 -------------------------------------------------- Mvan_4862|M.vanbaalenii_PYR-1 MNTLKRINPSIPVLLALMALTAVLRLIN-IAGSPIRLDDEGTYVAQAFAM TH_0709|M.thermoresistible__bu -MTASTSSTDLPKSGLGGQISRLNQFARSAAGRPALLGGLG------AVL MMAR_4294|M.marinum_M -------------------------------------------------- MUL_1004|M.ulcerans_Agy99 -------------------------------------------------- Mvan_4862|M.vanbaalenii_PYR-1 IQWGELAHYTYWYDHPPAGWLQLAGWMLLTGPGFGGNAVTAGRYLMVVVA TH_0709|M.thermoresistible__bu ITAGGLGAGSTRVHDP------LLESLYLSWLRFGHGLVVSSTLLWTGVT MMAR_4294|M.marinum_M ---------------------------------------------MASTW MUL_1004|M.ulcerans_Agy99 ---------------------------------------------MASTW Mvan_4862|M.vanbaalenii_PYR-1 VVGTGLLWLLARRIGMTRPAAAAAVTVLAVSPLAISLSRAVYLDNLAVAW TH_0709|M.thermoresistible__bu LMLIAWLWLG-RHVITGRATEYGMIATTGFWLVPLLLSVPVFSRDTYSYL MMAR_4294|M.marinum_M SLS--------KGLAAVVVTSAAAFGLCP--------------------- MUL_1004|M.ulcerans_Agy99 SLS--------KGLAAVVVTSAAAFGLCP--------------------- Mvan_4862|M.vanbaalenii_PYR-1 MLAGLVLVCSPRHRLSAMLGAAACFGIAVLTKETMLLFLPMVAWLVWTKT TH_0709|M.thermoresistible__bu AQG------------ALLRDGFDPYLVGP--------------------- . : : . : : MMAR_4294|M.marinum_M -------------------------------------------------- MUL_1004|M.ulcerans_Agy99 -------------------------------------------------- Mvan_4862|M.vanbaalenii_PYR-1 APATRRYALTVFGTVFALVVSIYALMALVRGELIPGPGHVSLWEGVKFQL TH_0709|M.thermoresistible__bu -------------------------------------------------- MMAR_4294|M.marinum_M ------GAAADPAAPQPN-------PNPQLPGLPALAQLSPIIQQ----- MUL_1004|M.ulcerans_Agy99 ------AAAADPAAPQPN-------PNPQLPGLPALAQLSPIIQQ----- Mvan_4862|M.vanbaalenii_PYR-1 WQREASGSIGDPQSLKRHTIDEWLRLDPVLPLLAAPIALSALLIQRLRPY TH_0709|M.thermoresistible__bu --------VENPNPLLDD-------VSPIWTTTTAPYGPAFILVAK---- :* . . .* . .* : :: MMAR_4294|M.marinum_M --------------------------------AAGNPEQ----------- MUL_1004|M.ulcerans_Agy99 --------------------------------AAGNPEQ----------- Mvan_4862|M.vanbaalenii_PYR-1 ALGLLILVVTVLRPGYLPVPFVIAALPLIALLAAGLGEEGVRRLRRGGQI TH_0709|M.thermoresistible__bu -------------------------------FVTMLVNDN---------- .: :: MMAR_4294|M.marinum_M -----------------ATQLLMAAAQAFAHNPAAPTESRNVASSVNQFV MUL_1004|M.ulcerans_Agy99 -----------------ATQLLMAAAQAFAHNPAAPTESRNVASSVNQFV Mvan_4862|M.vanbaalenii_PYR-1 APRFGSRIRVTAALATAFAAAMLVALWVPSHDTVLSADDDAAMRQAQSWV TH_0709|M.thermoresistible__bu ----------------VVAGTMLLRLCMLPGLALLIWAAPRVARHIGANP : :: . . . MMAR_4294|M.marinum_M QEPVNPAP------------------------------------------ MUL_1004|M.ulcerans_Agy99 QEPVNPAP------------------------------------------ Mvan_4862|M.vanbaalenii_PYR-1 AANVPEEDRLIVDDAMWVDLVRDGRDRHNVIWSYKVDTDEQVQNLAPDGW TH_0709|M.thermoresistible__bu -------------------------------------------------- MMAR_4294|M.marinum_M -------GSPPLGVPAP--------------------------------- MUL_1004|M.ulcerans_Agy99 -------GSPPLGVPAP--------------------------------- Mvan_4862|M.vanbaalenii_PYR-1 ADYGWVVSTPSMRANMPDSGVLTDAMWHARPAATFGSGGERVDVLRVDSG TH_0709|M.thermoresistible__bu -------------------------------------------------- MMAR_4294|M.marinum_M -AAAPVEVAPPASAPVPHVPAPGAEPGTLAHLP----------------- MUL_1004|M.ulcerans_Agy99 -AAAPVEVAPPASAPVPHVPAPGAEPGTLAHLP----------------- Mvan_4862|M.vanbaalenii_PYR-1 GAPAARPAVPDFGVQVAARLHPDSDPDALADLQSGVVDQRTVATLSMLVS TH_0709|M.thermoresistible__bu -AAALWICVLNPLVIIHLMGGVHNEMLMVGLMM----------------- *.* . . : : :. : MMAR_4294|M.marinum_M ---------AGIDPAHAAGPAP---------------------VAAPAGA MUL_1004|M.ulcerans_Agy99 ---------AGIDPAHAAGPAP---------------------VAAPAGA Mvan_4862|M.vanbaalenii_PYR-1 RQPVVLQSISGVAAEEVAGTARREFRLGGPRDQLQAAAGFIERQRSPFGA TH_0709|M.thermoresistible__bu ---------AGIALTLSRHPVWG---------------------VASIAV :*: .. :. .. MMAR_4294|M.marinum_M PPASAPAPAAAAPASAPGTAPAPAAAPGPAPAAPAPAP------------ MUL_1004|M.ulcerans_Agy99 PPASAPAPAAAAPASAPGTAPAPAAAPGPAPAAPAPAP------------ Mvan_4862|M.vanbaalenii_PYR-1 ETVQLSDNGLTVRFPARATDVGLGSRPDPVPAGPPAAVRIVDMRRGQAAD TH_0709|M.thermoresistible__bu AVAVKATAGLALPFMVWVWMRQLREQRSLSPAAAFAIA------------ . . . : . . **.. . MMAR_4294|M.marinum_M ---------------AAAAPAPAPAPAAPP----AAPVAAPAPVPAPAPA MUL_1004|M.ulcerans_Agy99 ---------------AAAAPAPAPAPAAPPAAPVAAPVAAPAPVPAPAPA Mvan_4862|M.vanbaalenii_PYR-1 RLEFVHVDGTPVGSVRPGTGSPSDYRALPGGTYVMSTVADRGGVPVMRQA TH_0709|M.thermoresistible__bu -----------------------TAASLAIFAAVFAVLSWVAGVGLGWLT : . : :: . * : MMAR_4294|M.marinum_M AAPAP--------------------------------EAAAPAPAPAPAP MUL_1004|M.ulcerans_Agy99 AAPAP--------------------------------EAAAPAPAPAPAP Mvan_4862|M.vanbaalenii_PYR-1 FTVAPGATYTLALFSAGETGEIAAQLAPDGPVSGSSVRLLQAAAAAGPVK TH_0709|M.thermoresistible__bu ALAGS-------------------------------VKIINWLTVPTAVA .. . ... .. MMAR_4294|M.marinum_M AAAPGFGPDAPPTQDFMYPSIGTNCLADGSNIIATALSVAGPATIPTPGP MUL_1004|M.ulcerans_Agy99 AAAPGFGPDAPPTQDFMYPSIGTNCLADGSNIIATALSVAGPATIPTPGP Mvan_4862|M.vanbaalenii_PYR-1 LALAAPGADPTVLADNASYGLITGYGAEPAGAYDAVVTAGGREWRQPVEL TH_0709|M.thermoresistible__bu NLTNAIGGMFLPVNFYAVLEVTRIIGIAIIVVTLPVVWWRFRHDDRGALT . * : ..: MMAR_4294|M.marinum_M GPGQTAYVFTAVGTPGPAEVQRLPLNVTWVNLTTGKSGSVTLKPRSDINP MUL_1004|M.ulcerans_Agy99 GPGQTAYVFTAVGTPGPAEVQRLPLNVTWVNLTTGKSGSVTLKPRSDINP Mvan_4862|M.vanbaalenii_PYR-1 TDGTPTTLVVTDGRDGPAVHQTRDVAAAAAPLDPPAPGAPAVAPIPDKNP TH_0709|M.thermoresistible__bu GIAVAMLVVVLFVPAALPWYYTWPLAVLSALAQSRPAIALIAGFSTWIMV . . :.. . . : . . . . : . MMAR_4294|M.marinum_M EGPTTLTG------IADTGSGSIMSTIFGQVTTKERQCQFMPTIGSTVVP MUL_1004|M.ulcerans_Agy99 EGPTTLTG------IADTGSGSIMSTIFGQVTTKERQCQFMPTIGSTVVP Mvan_4862|M.vanbaalenii_PYR-1 SKTVAAGGDPRQKVLPLAACATVIAALAWALTRYQRRQGQWRGHGESVA- TH_0709|M.thermoresistible__bu IFRPDGAHGMYSWTHVLIATGCAVAAWWWLYRTESTPAEPIPQSGGSAGE . . ::: . * :. MMAR_4294|M.marinum_M --- MUL_1004|M.ulcerans_Agy99 --- Mvan_4862|M.vanbaalenii_PYR-1 --- TH_0709|M.thermoresistible__bu SGR