For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SAPTSWAGELRRIARGKARPYNEPPSVVNRRKLIVGVVLLVGAALLGYSLSRPAGDETFIWLTLALAGVW AAGAFASGPLHMGHVCFRGRNQRPVITGTAIGLALGAIFVVGALIVREVPGLNDYITRVLEYSNTGPLWL IVFITVINGVAEEMFFRGAVYTALLKFHPVIFSTVLYVIATAATTGNPMLGFAAIILGTVCAFERRATGG VLAPMLTHFFWGLVMVLALPPIFGV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4582 | - | - | 100% (236) | abortive infection protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1172 | - | 2e-79 | 61.64% (232) | integral membrane protein |
M. gilvum PYR-GCK | Mflv_2123 | - | 1e-119 | 87.71% (236) | abortive infection protein |
M. tuberculosis H37Rv | Rv1140 | - | 2e-79 | 61.64% (232) | integral membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4311 | - | 7e-80 | 62.56% (227) | integral membrane protein |
M. avium 104 | MAV_1282 | - | 1e-84 | 64.22% (232) | caax amino protease family protein |
M. smegmatis MC2 155 | MSMEG_5188 | - | 1e-85 | 68.22% (214) | caax amino protease family protein |
M. thermoresistible (build 8) | TH_1985 | - | 3e-91 | 71.37% (227) | PROBABLE INTEGRAL MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_0983 | - | 8e-80 | 62.11% (227) | integral membrane protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb1172|M.bovis_AF2122/97 MPRDYTAPRWAHAWAGEPRPARWHPANQPAHPDHSNRESPACMSQSTTPY Rv1140|M.tuberculosis_H37Rv MPRDYTAPRWAHAWAGEPRPARWHPANQPAHPDHSNRESPACMSQSTTPY MAV_1282|M.avium_104 ------------------------------------------MSQSTSPY MMAR_4311|M.marinum_M ------------------------------------------MSQSTAP- MUL_0983|M.ulcerans_Agy99 ------------MGEHRPGSTGRCVTKQPRHPDRPDSESSVRMSQSTAP- Mvan_4582|M.vanbaalenii_PYR-1 ------------------------------------------MSAPTSW- Mflv_2123|M.gilvum_PYR-GCK ------------------------------------------MTAPTSW- MSMEG_5188|M.smegmatis_MC2_155 ------------------------------------------MTR----- TH_1985|M.thermoresistible__bu ------------------------------------------MTDRGVL- *: Mb1172|M.bovis_AF2122/97 RSSVLAEFRRAITNVAVPHHEPPGIVRRRRVVVGVTLVIGAVMLGFSLRR Rv1140|M.tuberculosis_H37Rv RSSVLAEFRRAITNVAVPHHEPPGIVRRRRVVVGVTLVIGAVMLGFSLRR MAV_1282|M.avium_104 HTSVFAELRRAITNVAVPHNEPPAIVRRRRVVVAITLVLGAAVLGYSLRR MMAR_4311|M.marinum_M QFSAIDDIRRAITNVAVPHHEAPSVVLRRRIVVGVVLVIGAVVMGLSMRR MUL_0983|M.ulcerans_Agy99 QFSAIDDIRRAITNVAVPHHEAPSVVLRRRIVVGVVLVIGAVVMGLSMRR Mvan_4582|M.vanbaalenii_PYR-1 ----AGELRRIARGKARPYNEPPSVVNRRKLIVGVVLLVGAALLGYSLSR Mflv_2123|M.gilvum_PYR-GCK ----AGELRKIAATKAPPYNEPPSVVGRRKVIVAVVLLIGAALLGYSLSR MSMEG_5188|M.smegmatis_MC2_155 -------FIQQAREPEVCH-EAPEQIRRRRIVVSVFLLIGAGLLGYSLTR TH_1985|M.thermoresistible__bu ----R-EFGDIARTVAVPHQETPAVVRRRRVIVIVVLLIGSGLLAYSLTR : : *.* : **:::* : *::*: ::. *: * Mb1172|M.bovis_AF2122/97 TPGESSFYWLTLALAAVWIAGALMSGPLHLGGICWRGRNQRPVITGTTVG Rv1140|M.tuberculosis_H37Rv TPGESSFYWLTLALAAVWIAGALMSGPLHLGGICWRGRNQRPVITGTTVG MAV_1282|M.avium_104 HPGESSFYWLTLGLAAVWTVGALSSGPLHLGGICWRGRNQRPVITGTTVG MMAR_4311|M.marinum_M QPGESTFYWLTLTLAAVWALGALASGPLHLGGIRWRGRNQRPVITGTTIG MUL_0983|M.ulcerans_Agy99 QPGEATFYWLTLTLAAVWALGSLASGPLHLGGIRWRGRNQRPVITGTTIG Mvan_4582|M.vanbaalenii_PYR-1 PAGDETFIWLTLALAGVWAAGAFASGPLHMGHVCFRGRNQRPVITGTAIG Mflv_2123|M.gilvum_PYR-GCK PPGDETFIWLTLALAGVWAAGAFASGPLHMGYVCFRGRNQRPVITGTAIG MSMEG_5188|M.smegmatis_MC2_155 SPGDGSFLWLTLVLAAVWAVGAFVSGPLHLGYLHVRGRDRRPALAGAVVG TH_1985|M.thermoresistible__bu PPGDQSFYWLTLVLAAVWAVGALVSGPLHLGCVRFRGRNQRPVITGTVVG .*: :* **** **.** *:: *****:* : ***::**.::*:.:* Mb1172|M.bovis_AF2122/97 LLLAGIFGVGAMIVRAIPGAAEPIARVLQFAHQGTLLPILLITLINGIAE Rv1140|M.tuberculosis_H37Rv LLLAGIFGVGAMIVRAIPGAAEPIARVLQFAHQGTLLPILLITLINGIAE MAV_1282|M.avium_104 LLLGGAFVVGGLIAREIPAVSALITRVLLYAHHGWLPLVVAITVINGIAE MMAR_4311|M.marinum_M LLLGGIFVLGALVVRKIPAAAELIVRVLQFASQGSLFLVVVITLINGIAE MUL_0983|M.ulcerans_Agy99 LLLGGIFVLGALVVRKIPAATELIVRVLQFASQGSLFLVVVITLINGIAE Mvan_4582|M.vanbaalenii_PYR-1 LALGAIFVVGALIVREVPGLNDYITRVLEYSNTGPLWLIVFITVINGVAE Mflv_2123|M.gilvum_PYR-GCK LGLGAVFVLGALVVREIPGVNDYIRAVLQYSNAGPLYVIVFITVINGVAE MSMEG_5188|M.smegmatis_MC2_155 ITLAGVFVVGALIAREIPGIREFITRVLEFSNTGPLALIVFITVINGVAE TH_1985|M.thermoresistible__bu LLLGGLFVVGGLIAREIPGVRDYITRVLEFSNHGPLLLVVFITVINGLAE : *.. * :*.::.* :*. * ** :: * * :: **:***:** Mb1172|M.bovis_AF2122/97 EMFFRGALYTALGRRYPVTISTVLYVGATMAS-ANLMLGFAAIFVGTVCA Rv1140|M.tuberculosis_H37Rv EMFFRGALYTALGRRYPVTISTVLYVGATMAS-ANLMLGFAAIFVGTVCA MAV_1282|M.avium_104 ELFFRGALYTALGRYHPVLISTLLYTAATMAA-GNPMLGFAAVILGTVCA MMAR_4311|M.marinum_M EMFFRGALYTALGRFYPVAVSTVVYIGAIMAS-ANLMLGFAAVILGGVCA MUL_0983|M.ulcerans_Agy99 EMFFRGALYTALGRFYPVAVSTVVYIGAIMAS-ANLMLGFAAVILGGVCA Mvan_4582|M.vanbaalenii_PYR-1 EMFFRGAVYTALLKFHPVIFSTVLYVIATAATTGNPMLGFAAIILGTVCA Mflv_2123|M.gilvum_PYR-GCK EMFFRGAVYTSLLKFHPVIVSTALYVIATAATTGNPMLGFAAIILGTVCA MSMEG_5188|M.smegmatis_MC2_155 ELFFRGALYSALGKFYPVVVSTLIYIVTTMAS-GNPMLGFAAIILGAVCA TH_1985|M.thermoresistible__bu ELFFRGALYTALGTAYPAVISTIIYIGVTSAT-GNPMLGFAAIILGAVCA *:*****:*::* :*. .** :* . *: .* ******:::* *** Mb1172|M.bovis_AF2122/97 LERRASGGVLAPILTHFVWGLIMVFALPPLFAV Rv1140|M.tuberculosis_H37Rv LERRASGGVLAPILTHFVWGLIMVFALPPLFAV MAV_1282|M.avium_104 LERRASGGVLAPVLTHCGWGLIMVLALPPVFGL MMAR_4311|M.marinum_M WERRSTGGVLAPILTHLVWGLIMVLALPPLFGV MUL_0983|M.ulcerans_Agy99 WERRSTGGVLAPILTHLVWGLIMVLALPPLFGV Mvan_4582|M.vanbaalenii_PYR-1 FERRATGGVLAPMLTHFFWGLVMVLALPPIFGV Mflv_2123|M.gilvum_PYR-GCK FLRRATGGVLAPMLTHFFWGLVMVLALPPMFGV MSMEG_5188|M.smegmatis_MC2_155 MERRVTGGVLAPMLTHFFWGLAMVLALPPIFGV TH_1985|M.thermoresistible__bu FERRMTGGVLAPMLTHFFWGLIMVLALPPIFGV ** :******:*** *** **:****:*.: