For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTRIVDDPWDTTQIRGSGDDYVTQMRSHACAAIEKMPFADDKVREVATRFVERDGEEHAPVANLVLATTS PDYSRAFTKMIRSRGNPTVLSGREVQAYQRAMSLTDNQGGFLVPMQLDPTIILTANGSFNQVRQISRVVQ ATGKSWTGVTSAGVSGSWDGEAVEVSDDSPELQQPEIPVHKLQIWVEFSHELQHDAAGLADDIAKMIAFE KDVKESIAFATGSGVGQPRGVITALMGSDSVVNSAVTDTFAAGDVHNLDGDLPQRYAFNASWLAHRKIYS KIRQFDTNGGASLWGQLAEGRKSELLGRPDYVAEAMDSSITNGQDNHVLAFGDFQNFVIADRLGTTLSYI PNLMGPNGRPVGKAGWHAWIRVGSDVVNPGAFRLLNVT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4361 | - | - | 100% (389) | phage major capsid protein, HK97 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1602c | - | 6e-65 | 41.49% (335) | phiRV1 phage protein |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv1576c | - | 6e-65 | 41.49% (335) | phiRV1 phage protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1602c|M.bovis_AF2122/97 MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRA
Rv1576c|M.tuberculosis_H37Rv MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRA
Mvan_4361|M.vanbaalenii_PYR-1 ---------------------------------------MTTRIVDDPWD
** .::
Mb1602c|M.bovis_AF2122/97 EQRRRGREAEEELRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTL
Rv1576c|M.tuberculosis_H37Rv EQRRRGREAEEALRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTL
Mvan_4361|M.vanbaalenii_PYR-1 TTQIRG-SGDDYVTQMRSHACAAIEKMPFADDK--------VREVATRFV
: ** ..:: : : *: .: * ..*. :*:.* * :
Mb1602c|M.bovis_AF2122/97 DSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVK
Rv1576c|M.tuberculosis_H37Rv DSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVK
Mvan_4361|M.vanbaalenii_PYR-1 E---RDGEEHAPVAN-------------------LVLATTSPDYSRAFTK
: *** : .*: : ** * ** **.*
Mb1602c|M.bovis_AF2122/97 RVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDP
Rv1576c|M.tuberculosis_H37Rv RVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDP
Mvan_4361|M.vanbaalenii_PYR-1 MIR-SRGNPTVLSGREVQAY---------QRAMSLTDNQGGFLVPMQLDP
: . .. ** :.**. *: ****.*.*.*****:* ***
Mb1602c|M.bovis_AF2122/97 AILLSGDGSTNPIRQVARVVQTTSEIWRGVTSEGAEARWYSEAQEVSDDS
Rv1576c|M.tuberculosis_H37Rv AILLSGDGSTNPIRQVARVVQTTSEIWRGVTSEGAEARWYSEAQEVSDDS
Mvan_4361|M.vanbaalenii_PYR-1 TIILTANGSFNQVRQISRVVQATGKSWTGVTSAGVSGSWDGEAVEVSDDS
:*:*:.:** * :**::****:*.: * **** *... * .** ******
Mb1602c|M.bovis_AF2122/97 PALAQPAVPNYRGSCWIPFSIELEGDAASFVGEIGKILADSVEQLQTAAF
Rv1576c|M.tuberculosis_H37Rv PALAQPAVPNYRGSCWIPFSIELEGDAASFVGEIGKILADSVEQLQAAAF
Mvan_4361|M.vanbaalenii_PYR-1 PELQQPEIPVHKLQIWVEFSHELQHDAAGLADDIAKMIAFEKDVKESIAF
* * ** :* :: . *: ** **: ***.:..:*.*::* . : :: **
Mb1602c|M.bovis_AF2122/97 VNGSGNGEPTGFVSALTGTSDQVVVGAGSEAIVAADVYALQSALPPRFQA
Rv1576c|M.tuberculosis_H37Rv VNGSGNGEPTGFVSALTGTSDQVVVGAGSEAIVAADVYALQSALPPRFQA
Mvan_4361|M.vanbaalenii_PYR-1 ATGSGVGQPRGVITALMG-SDSVVNSAVTDTFAAGDVHNLDGDLPQRYAF
..*** *:* *.::** * **.** .* ::::.*.**: *:. ** *:
Mb1602c|M.bovis_AF2122/97 SAAFAANLSTINTLRQAETSNGALKFPSLHDS-PPMLAGKSVLEVSHMDT
Rv1576c|M.tuberculosis_H37Rv SAAFAANLSTINTLRQAETSNGALKFPSLHDS-PPMLAGKSVLEVSHMDT
Mvan_4361|M.vanbaalenii_PYR-1 NASWLAHRKIYSKIRQFDTNGGASLWGQLAEGRKSELLGRPDYVAEAMDS
.*:: *: . ..:** :*..** : .* :. . * *:. .. **:
Mb1602c|M.bovis_AF2122/97 VDSAVTATNHPLVLGDWKQFLIVDRVGSMVELVPHLFGPNRRPTGQRGFF
Rv1576c|M.tuberculosis_H37Rv VDSAVTATNHPLVLGDWKQFLIGDRVGSMVELVPHLFGPNRRPTGQRGFF
Mvan_4361|M.vanbaalenii_PYR-1 SITNG-QDNHVLAFGDFQNFVIADRLGTTLSYIPNLMGPNGRPVGKAGWH
: ** *.:**:::*:* **:*: :. :*:*:*** **.*: *:.
Mb1602c|M.bovis_AF2122/97 AWFRVGSDVLVRNAFRVLKVETTA
Rv1576c|M.tuberculosis_H37Rv AWFRVGSDVLVRNAFRVLKVETTA
Mvan_4361|M.vanbaalenii_PYR-1 AWIRVGSDVVNPGAFRLLNVT---
**:******: .***:*:*