For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTSESPRPRVVLVDGVPMSALVAQAPDPRAVILAVHGGATSSAYFDCPGRPDLSLLRAAATAGFTTIALD RPGYGTSAVYAAEFADPARRVASSFAAVDKILAGADRGAGLFVLGHSAGCELALRMATSGDDVVGVELAG TGLRYGEKAKDVIATATVTNRPAGLRDLLWEPTDLYPAEVLTGALSAPGVAYEGDVTANWARRDFPAIAA DVRVPVQFSIAEHEKVWETDPEAVSAIAGLFTASPRVRINEVAASGHNLSVGLTAGEYHRTVMSFIDECI AAADGRDREQVEAS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4172 | - | - | 100% (294) | hypothetical protein Mvan_4172 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2482 | - | 1e-129 | 76.47% (289) | hypothetical protein Mflv_2482 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4732 | - | 4e-82 | 52.48% (282) | thioesterase |
M. avium 104 | MAV_0918 | - | 1e-94 | 58.01% (281) | hypothetical protein MAV_0918 |
M. smegmatis MC2 155 | MSMEG_4815 | - | 9e-93 | 57.29% (288) | hypothetical protein MSMEG_4815 |
M. thermoresistible (build 8) | TH_3915 | - | 1e-36 | 43.65% (197) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4815|M.smegmatis_MC2_155 MASSDGTARSAPHPRVVLADGVPMSALVAEAPE---PRAVVVALHGGATT TH_3915|M.thermoresistible__bu -------------------------------------------MLG---- Mvan_4172|M.vanbaalenii_PYR-1 ----MTSES--PRPRVVLVDGVPMSALVAQAPD---PRAVILAVHGGATS Mflv_2482|M.gilvum_PYR-GCK ----MTAGAGVPRPRVVLVDGVPMSALAVQVPD---PRAVIVAIHGGATS MMAR_4732|M.marinum_M ----MNQAL--VRPRVVIVDGVPMSGLLAEAADPTGPKATVVALHGGGTS MAV_0918|M.avium_104 ----MNGAA--PRPRLVIVDGVPMSALVAEAED---PKAVLVAIHGGGTT : * MSMEG_4815|M.smegmatis_MC2_155 SAYFDCPGHPELSLLHAGVAAGFTVVALDRPGYGASAPYPEAMARPEQRL TH_3915|M.thermoresistible__bu ----------------------------DRP------------------- Mvan_4172|M.vanbaalenii_PYR-1 SAYFDCPGRPDLSLLRAAATAGFTTIALDRPGYGTSAVYAAEFADPARRV Mflv_2482|M.gilvum_PYR-GCK SAYFDCPGRPELSLLRAAGAAGFTAIALDRPGYGSSAVYAGEFTDPGRRV MMAR_4732|M.marinum_M SSYFDCPGHPQLSLLRLGATLGFTVVALDRPGHGSSAPYPEAMQHPEQRV MAV_0918|M.avium_104 AVYFDCPGHPSFSLLRAGATAGFTVVALDRPGYGSSAPYPGAMTRPEQRV *** MSMEG_4815|M.smegmatis_MC2_155 ALAFGALERIVGT----QDLFLLGHSMGCELAVRMAIS--GARVVGISLA TH_3915|M.thermoresistible__bu ----------TG-----HGVFVLAHSNGCELAVRLAAAERGGELLGMALA Mvan_4172|M.vanbaalenii_PYR-1 ASSFAAVDKILAGADRGAGLFVLGHSAGCELALRMATS--GDDVVGVELA Mflv_2482|M.gilvum_PYR-GCK AAAAGTIDKILGDSDRGAGLFLLGHSAGCELTLRMATG--RDDVVGVELS MMAR_4732|M.marinum_M DLAFGAIDRMLDQRPRGAGLFLMGHSGGCELVLRMATSPRAADLLGVELG MAV_0918|M.avium_104 ELAYGAVDRILGQRPRGAGLFLMGHSGGCELVLRMAADERGADLLGIELA .:*::.** ****.:*:* ::*: *. MSMEG_4815|M.smegmatis_MC2_155 GTGRRYQSAGRDILKDASSDHRPRGLRELLWEPARLYPPDVLGSGLSAG- TH_3915|M.thermoresistible__bu GTGLRYEPAAAEILKAASPTNRPVGLRELLWEPAAVYPPEVLAELPSAAS Mvan_4172|M.vanbaalenii_PYR-1 GTGLRYGEKAKDVIATATVTNRPAGLRDLLWEPTDLYPAEVLTGALSAP- Mflv_2482|M.gilvum_PYR-GCK GTGLRYTPQARDIIRDATVTSRPAGLRDLLWTPTDLYPAEVLTGALSAP- MMAR_4732|M.marinum_M GTGRRYHPAAKEVMRLAALQDRPPGVRELLWEPMHLYPDDIRRGITNSST MAV_0918|M.avium_104 GTGRHYHPAAREILKTATRERRPAGLRELLWHPENLYPPEVLGGATVSPS *** :* . ::: *: ** *:*:*** * :** :: : MSMEG_4815|M.smegmatis_MC2_155 GAAYEGEVVKTWSWQDFPQLAALVKVPAQFIAGDHENVWEAGTDALAAIG TH_3915|M.thermoresistible__bu GAPYEAALVAGWPRRDFRELA----------------------------- Mvan_4172|M.vanbaalenii_PYR-1 GVAYEGDVTANWARRDFPAIAADVRVPVQFSIAEHEKVWETDPEAVSAIA Mflv_2482|M.gilvum_PYR-GCK GVAYEGDVTAHWAGRDFPALAERLTTPVQFSVADNEKVWQSSPEALAAIT MMAR_4732|M.marinum_M APRYERTVALNWPNQDFPALAPGVRVPVRFTLGEHDNVFRADPSALAEIA MAV_0918|M.avium_104 APSYEDQMVSNWARRDFPALAPAVRVPVHFSIAEHEKVWQNDASAMDEIA . ** :. *. :** :* MSMEG_4815|M.smegmatis_MC2_155 AMFTASPRVAVEVLPESGHNLSVGLTAAEYHQRVLSFAAECLDVRAT--- TH_3915|M.thermoresistible__bu -LFAASPRVVTDEILGAGHNLSLGWTAAAYHLRVLSFVAECVAARQ---- Mvan_4172|M.vanbaalenii_PYR-1 GLFTASPRVRINEVAASGHNLSVGLTAGEYHRTVMSFIDECIAAADG--- Mflv_2482|M.gilvum_PYR-GCK ALFSASPRVRINRMNDSGHNLSVGLTAGDYHRNVLSFTEECISDAPG--- MMAR_4732|M.marinum_M DMFSATEHFVNSRPPGAGHNLSLGHTAADYHRQVLSFVEDCASARPP--- MAV_0918|M.avium_104 ALFTGAPEFTVHRQPGAGHNISLGYTAADYHATVLSFANACATAGPAPNV :*:.: .. :***:*:* **. ** *:** * MSMEG_4815|M.smegmatis_MC2_155 ---------------RAGTDVEVEAG------------------------ TH_3915|M.thermoresistible__bu ---------------RGRTGMEVEAG------------------------ Mvan_4172|M.vanbaalenii_PYR-1 -----------------RDREQVEAS------------------------ Mflv_2482|M.gilvum_PYR-GCK -----------------RDREEVEAS------------------------ MMAR_4732|M.marinum_M ------------------DGDAAAAAG----------------------- MAV_0918|M.avium_104 KLASRSASNVKLASRSAADGEPAADGEPAEDGEQAEDREQAAHETTAAQE . . MSMEG_4815|M.smegmatis_MC2_155 --- TH_3915|M.thermoresistible__bu --- Mvan_4172|M.vanbaalenii_PYR-1 --- Mflv_2482|M.gilvum_PYR-GCK --- MMAR_4732|M.marinum_M --- MAV_0918|M.avium_104 EAG