For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LPNQKIEINGGNVVYETLGDQGEFIVLTPGGRFSKDIPGLRPLAEKLVEGGYRVLLWDRPNCGKSDVQFY GQSESHMRAETLAQLIAKLDIGPCIIAGGSGGARDSMLTTMLYPELVRKLVVWNIVGGVYGSFVLGSYYI VPSILAVRGAGMKAVSKIDEWQERIAENPDNETRILEQDPQAFLKLMLRWLNAFVPKPGQTIPGVEDEMF DNITVPTLIIRGGENDLDHPKRTSLEVSCLIKGSTLIDPPWPEDAWERAGEDRASGKVKRFNMFDTWVQA APAILDFLGR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4167 | - | - | 100% (290) | hypothetical protein Mvan_4167 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2487 | - | 1e-155 | 91.67% (288) | hypothetical protein Mflv_2487 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4727 | - | 1e-133 | 79.15% (283) | hydrolase |
M. avium 104 | MAV_0927 | - | 1e-136 | 80.28% (284) | hypothetical protein MAV_0927 |
M. smegmatis MC2 155 | MSMEG_4810 | - | 1e-133 | 79.15% (283) | hypothetical protein MSMEG_4810 |
M. thermoresistible (build 8) | TH_0526 | - | 1e-133 | 78.67% (286) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4810|M.smegmatis_MC2_155 MTATGSTVGGPTLKRGEKTIEINGGNVVYEMLGKEGDVIALTPGGRFSKD TH_0526|M.thermoresistible__bu -VATTTRN---------QTVEVNGGNVVYEILGDRGDFIVLTPGGRFSKD MMAR_4727|M.marinum_M MTLQDNRVS---------SVEVNGGRVVYEILGDSGDLIVLTPGGRFGKD MAV_0927|M.avium_104 -------MP---------SIEVNGGNVVYEILGDSGDLIALTPGGRFSMQ Mvan_4167|M.vanbaalenii_PYR-1 ---MPNQ-----------KIEINGGNVVYETLGDQGEFIVLTPGGRFSKD Mflv_2487|M.gilvum_PYR-GCK ---MPNK-----------KIEINGGTVVYEILGKEGEFIVLTPGGRFSKD .:*:*** **** **. *:.*.*******. : MSMEG_4810|M.smegmatis_MC2_155 IPGLRPLARELVKGGYRVLLWDRPNCGRSDVQFHGQSESHMRAETLYTLI TH_0526|M.thermoresistible__bu IPGLRPLAEALVDGGYRVLLWDRPNCGASDVQFYGESESHMRAETLYGLL MMAR_4727|M.marinum_M IPGLRPLALALVDGGYRVLLWDRPNCGASDVQFYGQSESHMRAETLHGLL MAV_0927|M.avium_104 IPGLRPLADALVAGGYRVLLWDRPNCGASDVQFYGQSESHMRAETLHKLV Mvan_4167|M.vanbaalenii_PYR-1 IPGLRPLAEKLVEGGYRVLLWDRPNCGKSDVQFYGQSESHMRAETLAQLI Mflv_2487|M.gilvum_PYR-GCK IPGLKPLAKKLVEGGYRVLLWDRPNCGKSDVQFYGQSESHMRAETLQQLI ****:*** ** ************** *****:*:********** *: MSMEG_4810|M.smegmatis_MC2_155 SKLGVGPCIIAGGSGGARDSMITAMLYPEIVTKLVVWNIVGGVYGSFVLG TH_0526|M.thermoresistible__bu RALDIGPCHIAGGSGGARDSMLFTMLYPDMVTRLVVWNIVGGVYGSFVLG MMAR_4727|M.marinum_M AALGVQQCIIAGGSGGARDSILATILFPELVSKLVVWNIVGGIYGTFVLG MAV_0927|M.avium_104 TGLGFERCILAGGSGGARDSMLTTMLYPEMVTKLVVWNIVGGIYGTFVLG Mvan_4167|M.vanbaalenii_PYR-1 AKLDIGPCIIAGGSGGARDSMLTTMLYPELVRKLVVWNIVGGVYGSFVLG Mflv_2487|M.gilvum_PYR-GCK TKLDIGPVILLGGSGGARDSMLTTMLYPELVRKLVVWNIVGGVYGSFVLG *.. : *********:: ::*:*::* :*********:**:**** MSMEG_4810|M.smegmatis_MC2_155 GHYITPSILAVRGLGIEGLLHVPEWRERIEQNPANRQRFLDLDADEFLKV TH_0526|M.thermoresistible__bu GHYVVPSILAVRGLGIKGLLSVPEWRERIDANPANEQRFLALDADEFLKV MMAR_4727|M.marinum_M SYYLVPSILAVRGTGIEALLKVPEWRERIEANPTNRQRFLDLDRDEFLKV MAV_0927|M.avium_104 SFYIIPSILAVRGTGMDGVIKVQEWRERIEENPANKQRFLDFDSGEFLKV Mvan_4167|M.vanbaalenii_PYR-1 SYYIVPSILAVRGAGMKAVSKIDEWQERIAENPDNETRILEQDPQAFLKL Mflv_2487|M.gilvum_PYR-GCK SYYIVPSILAVRGAGMKAVAQIAEWQERIAENPGNEQRILDQDPAVFLKL ..*: ******** *:..: : **:*** ** *. *:* * ***: MSMEG_4810|M.smegmatis_MC2_155 MLRWLNAFVSKPGQTIPGVPDEMFDNITVPTLIIRGGENDWDHPKRTSLE TH_0526|M.thermoresistible__bu MRRWLNAYVPKPGQTIPGVVDEMFENITVPTLIIRGGENDWDHPKRTSLE MMAR_4727|M.marinum_M MLRWLNAFVSKPGQTIPGVEDEMFDRIKVPTLIIRGGENDWDHPKRTSLE MAV_0927|M.avium_104 MLRWLNAFVSKPGQTIPGVEDEMFDRITVPTLIIRGGENDMDHPKRTSLE Mvan_4167|M.vanbaalenii_PYR-1 MLRWLNAFVPKPGQTIPGVEDEMFDNITVPTLIIRGGENDLDHPKRTSLE Mflv_2487|M.gilvum_PYR-GCK MLRWLNAFVPKPGQTIPGVEDEMFDNITVPTLIIRGGENDLDHPKRTSLE * *****:*.********* ****:.*.************ ********* MSMEG_4810|M.smegmatis_MC2_155 VNCLIKGSTLIDPPWPEDAWERAGEKFARSGGKKFCLFDTWVQAAPAILE TH_0526|M.thermoresistible__bu VHCLIKGSTLIDPPWPEDAWERAGEKMAQSGGKNFCLFDTWVQAAPPILE MMAR_4727|M.marinum_M VSCLIKGSELIDPPWPEDAWERAAEDRAAGRVKHFNMFDTWVLAAPAILK MAV_0927|M.avium_104 VSCLIKGSKLIDPPWPEDAWERASEDRAAGRVQHFNMFDTWVQAAPAILE Mvan_4167|M.vanbaalenii_PYR-1 VSCLIKGSTLIDPPWPEDAWERAGEDRASGKVKRFNMFDTWVQAAPAILD Mflv_2487|M.gilvum_PYR-GCK VSCLIKSSKVIDPPWPEDAWERAGEARASGKVKRFNMFDTWVQAAPAILD * ****.* :*************.* * . :.* :***** ***.**. MSMEG_4810|M.smegmatis_MC2_155 FLK--- TH_0526|M.thermoresistible__bu FLDS-- MMAR_4727|M.marinum_M FLDS-- MAV_0927|M.avium_104 FLGS-- Mvan_4167|M.vanbaalenii_PYR-1 FLGR-- Mflv_2487|M.gilvum_PYR-GCK FLKKSK **