For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PSIEVNGGNVVYEILGDSGDLIALTPGGRFSMQIPGLRPLADALVAGGYRVLLWDRPNCGASDVQFYGQS ESHMRAETLHKLVTGLGFERCILAGGSGGARDSMLTTMLYPEMVTKLVVWNIVGGIYGTFVLGSFYIIPS ILAVRGTGMDGVIKVQEWRERIEENPANKQRFLDFDSGEFLKVMLRWLNAFVSKPGQTIPGVEDEMFDRI TVPTLIIRGGENDMDHPKRTSLEVSCLIKGSKLIDPPWPEDAWERASEDRAAGRVQHFNMFDTWVQAAPA ILEFLGS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_0927 | - | - | 100% (288) | hypothetical protein MAV_0927 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2487 | - | 1e-133 | 79.15% (283) | hypothetical protein Mflv_2487 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4727 | - | 1e-144 | 84.03% (288) | hydrolase |
M. smegmatis MC2 155 | MSMEG_4810 | - | 1e-133 | 79.58% (284) | hypothetical protein MSMEG_4810 |
M. thermoresistible (build 8) | TH_0526 | - | 1e-130 | 76.92% (286) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4167 | - | 1e-136 | 80.28% (284) | hypothetical protein Mvan_4167 |
CLUSTAL 2.0.9 multiple sequence alignment MAV_0927|M.avium_104 -------MP---------SIEVNGGNVVYEILGDSGDLIALTPGGRFSMQ MMAR_4727|M.marinum_M MTLQDNRVS---------SVEVNGGRVVYEILGDSGDLIVLTPGGRFGKD MSMEG_4810|M.smegmatis_MC2_155 MTATGSTVGGPTLKRGEKTIEINGGNVVYEMLGKEGDVIALTPGGRFSKD TH_0526|M.thermoresistible__bu -VATTTRN---------QTVEVNGGNVVYEILGDRGDFIVLTPGGRFSKD Mflv_2487|M.gilvum_PYR-GCK ---MPNK-----------KIEINGGTVVYEILGKEGEFIVLTPGGRFSKD Mvan_4167|M.vanbaalenii_PYR-1 ---MPNQ-----------KIEINGGNVVYETLGDQGEFIVLTPGGRFSKD .:*:*** **** **. *:.*.*******. : MAV_0927|M.avium_104 IPGLRPLADALVAGGYRVLLWDRPNCGASDVQFYGQSESHMRAETLHKLV MMAR_4727|M.marinum_M IPGLRPLALALVDGGYRVLLWDRPNCGASDVQFYGQSESHMRAETLHGLL MSMEG_4810|M.smegmatis_MC2_155 IPGLRPLARELVKGGYRVLLWDRPNCGRSDVQFHGQSESHMRAETLYTLI TH_0526|M.thermoresistible__bu IPGLRPLAEALVDGGYRVLLWDRPNCGASDVQFYGESESHMRAETLYGLL Mflv_2487|M.gilvum_PYR-GCK IPGLKPLAKKLVEGGYRVLLWDRPNCGKSDVQFYGQSESHMRAETLQQLI Mvan_4167|M.vanbaalenii_PYR-1 IPGLRPLAEKLVEGGYRVLLWDRPNCGKSDVQFYGQSESHMRAETLAQLI ****:*** ** ************** *****:*:********** *: MAV_0927|M.avium_104 TGLGFERCILAGGSGGARDSMLTTMLYPEMVTKLVVWNIVGGIYGTFVLG MMAR_4727|M.marinum_M AALGVQQCIIAGGSGGARDSILATILFPELVSKLVVWNIVGGIYGTFVLG MSMEG_4810|M.smegmatis_MC2_155 SKLGVGPCIIAGGSGGARDSMITAMLYPEIVTKLVVWNIVGGVYGSFVLG TH_0526|M.thermoresistible__bu RALDIGPCHIAGGSGGARDSMLFTMLYPDMVTRLVVWNIVGGVYGSFVLG Mflv_2487|M.gilvum_PYR-GCK TKLDIGPVILLGGSGGARDSMLTTMLYPELVRKLVVWNIVGGVYGSFVLG Mvan_4167|M.vanbaalenii_PYR-1 AKLDIGPCIIAGGSGGARDSMLTTMLYPELVRKLVVWNIVGGVYGSFVLG *.. : *********:: ::*:*::* :*********:**:**** MAV_0927|M.avium_104 SFYIIPSILAVRGTGMDGVIKVQEWRERIEENPANKQRFLDFDSGEFLKV MMAR_4727|M.marinum_M SYYLVPSILAVRGTGIEALLKVPEWRERIEANPTNRQRFLDLDRDEFLKV MSMEG_4810|M.smegmatis_MC2_155 GHYITPSILAVRGLGIEGLLHVPEWRERIEQNPANRQRFLDLDADEFLKV TH_0526|M.thermoresistible__bu GHYVVPSILAVRGLGIKGLLSVPEWRERIDANPANEQRFLALDADEFLKV Mflv_2487|M.gilvum_PYR-GCK SYYIVPSILAVRGAGMKAVAQIAEWQERIAENPGNEQRILDQDPAVFLKL Mvan_4167|M.vanbaalenii_PYR-1 SYYIVPSILAVRGAGMKAVSKIDEWQERIAENPDNETRILEQDPQAFLKL ..*: ******** *:..: : **:*** ** *. *:* * ***: MAV_0927|M.avium_104 MLRWLNAFVSKPGQTIPGVEDEMFDRITVPTLIIRGGENDMDHPKRTSLE MMAR_4727|M.marinum_M MLRWLNAFVSKPGQTIPGVEDEMFDRIKVPTLIIRGGENDWDHPKRTSLE MSMEG_4810|M.smegmatis_MC2_155 MLRWLNAFVSKPGQTIPGVPDEMFDNITVPTLIIRGGENDWDHPKRTSLE TH_0526|M.thermoresistible__bu MRRWLNAYVPKPGQTIPGVVDEMFENITVPTLIIRGGENDWDHPKRTSLE Mflv_2487|M.gilvum_PYR-GCK MLRWLNAFVPKPGQTIPGVEDEMFDNITVPTLIIRGGENDLDHPKRTSLE Mvan_4167|M.vanbaalenii_PYR-1 MLRWLNAFVPKPGQTIPGVEDEMFDNITVPTLIIRGGENDLDHPKRTSLE * *****:*.********* ****:.*.************ ********* MAV_0927|M.avium_104 VSCLIKGSKLIDPPWPEDAWERASEDRAAGRVQHFNMFDTWVQAAPAILE MMAR_4727|M.marinum_M VSCLIKGSELIDPPWPEDAWERAAEDRAAGRVKHFNMFDTWVLAAPAILK MSMEG_4810|M.smegmatis_MC2_155 VNCLIKGSTLIDPPWPEDAWERAGEKFARSGGKKFCLFDTWVQAAPAILE TH_0526|M.thermoresistible__bu VHCLIKGSTLIDPPWPEDAWERAGEKMAQSGGKNFCLFDTWVQAAPPILE Mflv_2487|M.gilvum_PYR-GCK VSCLIKSSKVIDPPWPEDAWERAGEARASGKVKRFNMFDTWVQAAPAILD Mvan_4167|M.vanbaalenii_PYR-1 VSCLIKGSTLIDPPWPEDAWERAGEDRASGKVKRFNMFDTWVQAAPAILD * ****.* :*************.* * . :.* :***** ***.**. MAV_0927|M.avium_104 FLGS-- MMAR_4727|M.marinum_M FLDS-- MSMEG_4810|M.smegmatis_MC2_155 FLK--- TH_0526|M.thermoresistible__bu FLDS-- Mflv_2487|M.gilvum_PYR-GCK FLKKSK Mvan_4167|M.vanbaalenii_PYR-1 FLGR-- **