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LIAVPITARLSGVAAPINTESAAWLADSDFDLDEFRAQVECDTDPADYPFADDVRSNVLVYSATTLARGS DRRGLQAELIRALDRGPGVVVFTGAFDADVVDRASEAFFAIIEAQRKAGEAGGDHFGAPGANDRIWNAAQ KLALHDPRVFADYYANDALAIICQAWLGPRYQVTSQVNVVNPGGKAQVPHRDYHLGFVPEEHLAEYPAHI HRTSPTLTLQGAVAHCDMPVDSGPTMLLPHSQRFTGGYVAFHRPGFLDYFASHHVQLPLRKGDAVFFNPA LYHAAGANVSTDIRRMANLMQISSPFGRAMEAMDRTAMVRAVYPVLRAMQAAGRPPREVENVVVATAEGY AFPTNLDSDQPVGSLAPPSQVDTVLDALARHLTEEELDIALRAQNERRIP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_3967 | - | - | 100% (400) | phytanoyl-CoA dioxygenase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_2614 | - | 1e-178 | 77.58% (388) | phytanoyl-CoA dioxygenase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1551 | - | 2e-06 | 30.95% (168) | hypothetical protein MMAR_1551 |
| M. avium 104 | MAV_3990 | - | 2e-05 | 31.29% (147) | phytanoyl-CoA dioxygenase (PhyH) family protein |
| M. smegmatis MC2 155 | MSMEG_4649 | - | 1e-159 | 71.17% (392) | phytanoyl-CoA dioxygenase |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_3479 | - | 2e-06 | 31.76% (148) | hypothetical protein MUL_3479 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_3967|M.vanbaalenii_PYR-1 MIAVPITARLSGVAAPINTESAAWLADSDFDLDEFRAQVECDTDPADYPF
Mflv_2614|M.gilvum_PYR-GCK ------------MAAPLNTAAAPWLGESDFRLDDFRAQVETDTDRSDYPH
MSMEG_4649|M.smegmatis_MC2_155 ----MTSSLGSPVRSTGSTRRGAFIDESDCSLDDFRAAVARTTDAADYPH
MMAR_1551|M.marinum_M ----------------------------------------MSIDDEAVTT
MUL_3479|M.ulcerans_Agy99 ---------------------------------------MMTKPSQPWKT
MAV_3990|M.avium_104 ----------------------------------------MSIDDESVTT
Mvan_3967|M.vanbaalenii_PYR-1 ADDVRSNVLVYSATTLARG--SDRRGLQAELIRALDRGPGVVVFTGAFDA
Mflv_2614|M.gilvum_PYR-GCK ADDVCGNVLVYSAPAMAR---ADRRVLQAELIRALSDGPGVVVVSEAFEP
MSMEG_4649|M.smegmatis_MC2_155 ATEIRSNVPVYTAAALDGTDDGRRRAVQTELIAALSDGPGVVLFENAFDP
MMAR_1551|M.marinum_M LEDLKGDLAHRYKWTPSGGSSVDSATIEADMAALDRDG--YVIWENLLSA
MUL_3479|M.ulcerans_Agy99 SRAIWRTATNGRQAT---GSSVDSATIEADMAALDRDG--YVIWENLLSA
MAV_3990|M.avium_104 LEDLRGDLAQRYKRTPTSGSSVDSAIVGADMAALDRDG--YVIWENLLST
: : : ::: * *: :..
Mvan_3967|M.vanbaalenii_PYR-1 DVVDRASEAFFAIIEAQRKAGEAGGDHFGAPGANDRIWNAAQKLALHDPR
Mflv_2614|M.gilvum_PYR-GCK EVIDRATAAFVALIEAQRTAGRAAGDHFGQPGANDRIWNAAQKLARHDPE
MSMEG_4649|M.smegmatis_MC2_155 AVVDSAGEAFTALIEQQRAAGGAAGDHFGAAGANDRVWNAAQKLALHSPR
MMAR_1551|M.marinum_M EQCRLIREVVRPWLEHTGRNSFEGRRTQRIYSVLSRTR-VCDRLADHP--
MUL_3479|M.ulcerans_Agy99 EQCRLIQEVVRPWLEHTGRNSFEGRRTQRIYSVLSRTR-VCDRLADHP--
MAV_3990|M.avium_104 EQCAQIRETVRPWLGHTGRNSFEGRRTQRVYSVLSRTR-VCDRLVDHP--
.. . : . . .. .* ..::*. *
Mvan_3967|M.vanbaalenii_PYR-1 VFADYYANDALAIICQAWLGPRYQVTSQVNVVNPGGKAQVPHRDYHLGFV
Mflv_2614|M.gilvum_PYR-GCK AFAAYYANDSLAMVCQAWLGPRYQVTSQVNVVNPGGNAQVPHRDYHLGFV
MSMEG_4649|M.smegmatis_MC2_155 VYAEYYANDILALVSQAWLGPRYQVTSQVNVVNPGGAAQVPHRDYHLGFV
MMAR_1551|M.marinum_M --------RVLAVLDRILMPNYLLSALQAINILPGEDAQLPHHDD--GFY
MUL_3479|M.ulcerans_Agy99 --------RVLAVLDRILMPNYLLSALQAINILPGEDAQLPHHDD--GFY
MAV_3990|M.avium_104 --------RVLAVLDRLLMPNYLLSALQAINIQPGEAAQLAHHDD--GFY
**:: : : : *. : ** **:.*:* **
Mvan_3967|M.vanbaalenii_PYR-1 PEEHLAEYPAHIHRTSPTLTLQGAVAHCDMPVDSGPTMLLPHSQRFTGGY
Mflv_2614|M.gilvum_PYR-GCK PDDHLADYPTHIHRTSAVLTLQGAVAHCDMPVESGPTMLLPHSQRFTGGY
MSMEG_4649|M.smegmatis_MC2_155 TPGALAAYPAHIHRLSPALTLQGAVAHCDMPVESGPTMLLPYSQTFEAGY
MMAR_1551|M.marinum_M P----------IPRPRAPLAAATIWAIDDFTADNGATVVIPGSHRWGR--
MUL_3479|M.ulcerans_Agy99 P----------IPRPRAPLAAATIWAIDDFTADNGATVVIPGSHRWGR--
MAV_3990|M.avium_104 P----------VPRPRAPLAAATIWAIDDFTADNGATVLYPGSHRWGK--
. : * . *: * *:..:.*.*:: * *: :
Mvan_3967|M.vanbaalenii_PYR-1 VAFHRPGFLDYFASHHVQLPLRKGDAVFFNPALYHAAGANVSTDIRRMAN
Mflv_2614|M.gilvum_PYR-GCK IAFNRPEFLDYFAAHHVQVPLRRGDAVFFNPALYHGAGQNRSRDIRRIAN
MSMEG_4649|M.smegmatis_MC2_155 IAFYRPEFIEFFAEHHVQLPLRTGDAVFFNPALFHGAGANTSTGIRRMAN
MMAR_1551|M.marinum_M ----RPPGPD---DQVLPVVMSAGSCVFFVGTLWHGGGANTST-SERLAV
MUL_3479|M.ulcerans_Agy99 ----RPPGPD---DQVLPVVMPAGSCVFFVGTLWHGGGANTST-SERLAV
MAV_3990|M.avium_104 ----RRPGPD---DEAIPVVMPVGSCVLFVGTLWHGGGANTTD-RDRLAV
* : . : : : *..*:* :*:*..* * : *:*
Mvan_3967|M.vanbaalenii_PYR-1 LMQISSPFGRAMEAMDRTAMVRAVYPVLRAMQAAGRPPREVENVVVATAE
Mflv_2614|M.gilvum_PYR-GCK LLQISSPFGRAMESTDRAAMVRAVYPSLLAMSAAGRSPRDLENVVVATAE
MSMEG_4649|M.smegmatis_MC2_155 LLQISSPFGRAMEALDRTAMIRAVYPELLAMKAAGRPEHELANVINATAE
MMAR_1551|M.marinum_M TAQYCEPWLRPMEAYT-----------LSISREIARAVSDDIRRMLGYSI
MUL_3479|M.ulcerans_Agy99 TAQYCEPWLRPMEAYI-----------LSISREIARAVSDDIRRMLGYSI
MAV_3990|M.avium_104 TAQYCQPWLRPMEAFT-----------LSVPRDIARTVSDDIRRMLGYSI
* ..*: *.**: * .*. : . : . :
Mvan_3967|M.vanbaalenii_PYR-1 GYAFPTNLDSDQPVGSLAPPSQVDTVLDALARHLTEEELDIALRAQNERR
Mflv_2614|M.gilvum_PYR-GCK GYAFPTNLDSDQPIGALAPPSQVDIVLDALARRLSPHDLDRALSAHDERR
MSMEG_4649|M.smegmatis_MC2_155 GYAFPTNLDLDQPIGSLAPPSQVDTVLEALATRRTPAELDTLLSQQDERR
MMAR_1551|M.marinum_M HPPFVGAVDGLHPLRLLESGPDS---------------------------
MUL_3479|M.ulcerans_Agy99 HPPFVGAVDGLHPLPGLRRC------------------------------
MAV_3990|M.avium_104 HPPFVGAVDGLHPLRLLEIEPDA---------------------------
.* :* :*: *
Mvan_3967|M.vanbaalenii_PYR-1 IP
Mflv_2614|M.gilvum_PYR-GCK TP
MSMEG_4649|M.smegmatis_MC2_155 IP
MMAR_1551|M.marinum_M --
MUL_3479|M.ulcerans_Agy99 --
MAV_3990|M.avium_104 --