For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SSLGGYDLSAGRDAHRADAPTRIPVPSLLRSLLTEHLDPGYAAAAQAPRRRGRVSEMAWQVVAAVLVATV FGLAWTQARDTASGVRESQQVLVGSVRSAEAAADTAAERRDSLTAEVDAERRSRLEGDATGRQLLTDLDQ AEQAAAATPVIGPGVTITVTDPGMSPNLTDVSKQRVEGSMQVILDRDLQLVVNSLWVSGAEAISVGGVRI GPNVTMRQAGGGILVDNQPVSSPYAILAVGPPNAMQDNFNRSAGLQRLRLLEASYGVVVNVSGGDGLVLP AGSVRDINFAKQMGLK*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_3139 | - | - | 100% (297) | hypothetical protein Mvan_3139 |
| M. vanbaalenii PYR-1 | Mvan_0020 | - | 5e-16 | 31.94% (191) | hypothetical protein Mvan_0020 |
| M. vanbaalenii PYR-1 | Mvan_3137 | - | 8e-12 | 28.38% (229) | hypothetical protein Mvan_3137 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1854 | - | 1e-103 | 65.55% (299) | hypothetical protein Mb1854 |
| M. gilvum PYR-GCK | Mflv_3406 | - | 1e-131 | 80.68% (295) | hypothetical protein Mflv_3406 |
| M. tuberculosis H37Rv | Rv1823 | - | 1e-103 | 65.55% (299) | hypothetical protein Rv1823 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2399 | - | 5e-79 | 49.83% (295) | hypothetical protein MAB_2399 |
| M. marinum M | MMAR_2700 | - | 2e-99 | 63.55% (299) | hypothetical protein MMAR_2700 |
| M. avium 104 | MAV_2892 | - | 1e-102 | 63.67% (300) | hypothetical protein MAV_2892 |
| M. smegmatis MC2 155 | MSMEG_3651 | - | 1e-101 | 62.87% (307) | membrane associated protein |
| M. thermoresistible (build 8) | TH_1122 | - | 2e-58 | 70.13% (154) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_3042 | - | 6e-99 | 63.55% (299) | hypothetical protein MUL_3042 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1854|M.bovis_AF2122/97 ---------------MAESDRLLGGY--------DPNAGYSAHAGAQPQR
Rv1823|M.tuberculosis_H37Rv ---------------MAESDRLLGGY--------DPNAGYSAHAGAQPQR
MMAR_2700|M.marinum_M ---------------MAEAGRLLGGY--------DPNAGYSAHA-ARPKR
MUL_3042|M.ulcerans_Agy99 ---------------MAEAGRLLGGY--------DPNAGYSAHA-ARPKR
MAV_2892|M.avium_104 ---------------MADVDRALGGY--------DPNAGHSAHLAARPQR
Mvan_3139|M.vanbaalenii_PYR-1 ---------------MSS----LGGY--------DLSAGRDAHRADAPTR
Mflv_3406|M.gilvum_PYR-GCK ---------------MSS----LGGY--------DASTGPTAHRPDAPTR
MSMEG_3651|M.smegmatis_MC2_155 ---------------MST----LGGYGSFTRPYTDPNAGLNRHEAGAPTR
TH_1122|M.thermoresistible__bu --------------------------------------------------
MAB_2399|M.abscessus_ATCC_1997 MDAQDTSANGKEPQIHGTGPHLMGGF--------EPEEGLGHHSANRPKR
Mb1854|M.bovis_AF2122/97 IPVPSLLRALLSEHLDAGYAAVAAERERAAAPRCWQARAVSWMWQALAAT
Rv1823|M.tuberculosis_H37Rv IPVPSLLRALLSEHLDAGYAAVAAERERAAAPRCWQARAVSWMWQALAAT
MMAR_2700|M.marinum_M NPVPSLLRALLSDHLDPGYAAAAAKRESSGAQRTVRARAFGWLWQALAAT
MUL_3042|M.ulcerans_Agy99 NPVPSLLRALLSDHLDPGYAAAAAKRESSGAQRTVRARAFGWLWQVLAAT
MAV_2892|M.avium_104 IPVPSLLRALLSEHLDPGYAAAAAKRGAVDETRNRRPRVSGWLWQALAAL
Mvan_3139|M.vanbaalenii_PYR-1 IPVPSLLRSLLTEHLDPGYAAAAQAPRR-------RGRVSEMAWQVVAAV
Mflv_3406|M.gilvum_PYR-GCK IPVPSLLRSLLTDHLDPGYAAAAQDGKP-------RSAVSSALWQVLAAV
MSMEG_3651|M.smegmatis_MC2_155 IPVPSLLRSLLSEHLDPGYAAAAEERKAGKPP---RKRVFEWGWEVLAAL
TH_1122|M.thermoresistible__bu --------------------------------------------------
MAB_2399|M.abscessus_ATCC_1997 NPVPSLLRTLLSDHLDAGYLEAAQARKNGAKP---RSRLAEWGWQAIAAI
Mb1854|M.bovis_AF2122/97 LVAAVFAAAVAQARSVAPGVRAAQQLLVASVRSTQAAATTLAQRRSTLSA
Rv1823|M.tuberculosis_H37Rv LVAAVFAAAVAQARSVAPGVRAAQQLLVASVRSTQAAATTLAQRRSTLSA
MMAR_2700|M.marinum_M LVAAVFAAAVAQARLVAPGVHAAQQLLVTSVRSTQAAAAELAQRRSALSA
MUL_3042|M.ulcerans_Agy99 LVAAVFAAAVAQARLVAPGVHAAQQLLVTSVRSTQAAAAELAQRRSALSA
MAV_2892|M.avium_104 LIATVFAAAVAQARSVAPGVRSAQQLLLGNVRATEGSAAKLAQRRNELSA
Mvan_3139|M.vanbaalenii_PYR-1 LVATVFGLAWTQARDTASGVRESQQVLVGSVRSAEAAADTAAERRDSLTA
Mflv_3406|M.gilvum_PYR-GCK TIATVFALAWAQARDTAPGVRETQQVMAGSVRAAEAATEEAAARRTSLTA
MSMEG_3651|M.smegmatis_MC2_155 AIAAVFAIAAAQVQLAAPAAREAQHALAARVRAAETAADQSGAERNALAE
TH_1122|M.thermoresistible__bu --------------------------------------------------
MAB_2399|M.abscessus_ATCC_1997 AIAVVFAAAVAQTTRIAPGMKQEKQGLLASIRSEQRDSGALESTRDRLSS
Mb1854|M.bovis_AF2122/97 KVDDVRRIVLADDAEGQRLLARLDVLSLAAASAPVVGPGLTVTVTDPGAS
Rv1823|M.tuberculosis_H37Rv KVDDVRRIVLADDAEGQRLLARLDVLSLAAASAPVVGPGLTVTVTDPGAS
MMAR_2700|M.marinum_M KVDDVQRLALADDVEGQRLLTQLDALNLAAASTPVIGPGLTVTVTDPGVG
MUL_3042|M.ulcerans_Agy99 KVDDVQRLALADDVEGQRLLTQLDALNLAAASTPVIGPGLTVTVTDPGVG
MAV_2892|M.avium_104 KVDDVQRHALADDAEGQRLLKRLDALGLAAASTAVIGPGLKVTVTDPGAG
Mvan_3139|M.vanbaalenii_PYR-1 EVDAERRSRLEGDATGRQLLTDLDQAEQAAAATPVIGPGVTITVTDPGMS
Mflv_3406|M.gilvum_PYR-GCK EVNAARRSRLEGDAEGRQLLAGLDEANYAAAATPVIGPGLTVTVTDPGMS
MSMEG_3651|M.smegmatis_MC2_155 AVDTEQRRRLGMDADGQRLLDDLDSANVAAAAVPMIGPGLTVTVTDPGMS
TH_1122|M.thermoresistible__bu ------------------------VADFAAAATPVRGPGLTVTVTDPGAT
MAB_2399|M.abscessus_ATCC_1997 EVAGARRSQLEGNEQGKELLNRLDQLGLAAASTEVRGPALVVTLADPGSG
***:. : **.: :*::***
Mb1854|M.bovis_AF2122/97 PNLSDVSKQRVSGSQQIILDRDLQLVVNSLWESGAEAISIDGVRIGPNVT
Rv1823|M.tuberculosis_H37Rv PNLSDVSKQRVSGSQQIILDRDLQLVVNSLWESGAEAISIDGVRIGPNVT
MMAR_2700|M.marinum_M PNLSDASKQRVSGSQQIILDRDLQLVLNSLWASGAEAVSVDGVRIGPNVT
MUL_3042|M.ulcerans_Agy99 LNLSDASKQRVSGSQQIILDRDLQLVLNSLWASGAEAVSVDGVRIGPNVT
MAV_2892|M.avium_104 PNLSDVSKQRVSGSRQIILDRDLQLVVNSLWAGGAEAVSVGGVRIGPTVT
Mvan_3139|M.vanbaalenii_PYR-1 PNLTDVSKQRVEGSMQVILDRDLQLVVNSLWVSGAEAISVGGVRIGPNVT
Mflv_3406|M.gilvum_PYR-GCK RDLTDVSKQRVEGSRQVILDRDLQLVVNSLWAGGAEAISVGGVRVGPNVT
MSMEG_3651|M.smegmatis_MC2_155 RDLSDVSKQRVAGSQQVILDRDLQLVVNSLWASGAEAISVGGVRVGAGVT
TH_1122|M.thermoresistible__bu RDLSDLSKERVPGSRQVILDRDLQLVVNSLWISGAEAIAIDEVRIGPNVT
MAB_2399|M.abscessus_ATCC_1997 GDLSDVSKERIPRSQQVILDRDMQLVVNSLWTSGAEAISVSDVRIGPNVT
:*:* **:*: * *:*****:***:**** .****:::. **:*. **
Mb1854|M.bovis_AF2122/97 IRQAGGAILVDNNPTSSPYTILAVGPPHAMQDVFDRSAGLYRLRLLETSY
Rv1823|M.tuberculosis_H37Rv IRQAGGAILVDNNPTSSPYTILAVGPPHAMQDVFDRSAGLYRLRLLETSY
MMAR_2700|M.marinum_M IRQAGGAILVDNNPTSSPYTILAVGPPHAMRDAFDRSPGMRRLKLLEISY
MUL_3042|M.ulcerans_Agy99 IRQAGGAILVDNNPTSSPYTILAVGPPHAMRDAFDRSPGMRRLKLLEISY
MAV_2892|M.avium_104 IRQAGGAILVDNNPTSSPYTILAIGPPHALRDAFDTSPGMQRLRLLQISY
Mvan_3139|M.vanbaalenii_PYR-1 MRQAGGGILVDNQPVSSPYAILAVGPPNAMQDNFNRSAGLQRLRLLEASY
Mflv_3406|M.gilvum_PYR-GCK IRQAGGGILVDNQPISSPYAILAVGPPNALDDNFTRSAGLQRLRLLEGSY
MSMEG_3651|M.smegmatis_MC2_155 IRQAGGGILVDNQPITSPYEIVAIGPPNAMAQVFDRSPALQRLRLLETSY
TH_1122|M.thermoresistible__bu IRQAGGGILVDNRPISSPYVIRAVGPPRGMQDQFDRSTALQRLRLLESAY
MAB_2399|M.abscessus_ATCC_1997 MRQAGGAILVDNQPTSSPYRIVAIGPANTIKSAFERSPGMARMRLLQKSY
:*****.*****.* :*** * *:**.. : . * *..: *::**: :*
Mb1854|M.bovis_AF2122/97 GVGVSVNVGDGLALPAGATRDVKFAKQIGP---
Rv1823|M.tuberculosis_H37Rv GVGVSVNVGDGLALPAGATRDVKFAKQIGP---
MMAR_2700|M.marinum_M GVGVSVNVGDGLALPAGSIRDVKFAKQIGP---
MUL_3042|M.ulcerans_Agy99 GVGVSVNVGDGLALPAGSIRDVKFAKQIGP---
MAV_2892|M.avium_104 GVVVTVDVADGLTLPAGSVRDVKFAKQIGPQ--
Mvan_3139|M.vanbaalenii_PYR-1 GVVVNVSGGDGLVLPAGSVRDINFAKQMGLK--
Mflv_3406|M.gilvum_PYR-GCK GVVVNVSSDDGLVLPAGSVREIRFARQMGP---
MSMEG_3651|M.smegmatis_MC2_155 GAGVNVSMGDGLDVPAVAVRDVRFGKQIG----
TH_1122|M.thermoresistible__bu GVGVNVSVEDDLTVPAATAREVNFATELGR---
MAB_2399|M.abscessus_ATCC_1997 GIRLTLATQENVQMAPAASRDVKYAKEIPAGNR
* :.: :.: :.. : *::.:. ::