For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MHTPLCDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFTPEQLEIELNWIDENIGDHPYGVDIVIP NKYEGMDSNMSADELKSTLNALVPQEHLDFAKKILADHGVPTDDSDDNALQLLGWTEATATPQVEVALRH PKMTLIANALGTPPKDMIEHIHAEGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGGHSGEVGSIVLWP QVVKEVAPVPVLAAGGIGSGQQIAAALALGAQGAWTGSQWVMVEESENTPVQHAAYAKATSRDTVRSRSF TGKPARMLRNDWTEAWENPENPKPLGMPLQYMVSGMAVAATHKYPNETVDVAFNPIGQVVGQFTKVEKTA TVIERWVQEYLEATNTLNELNEAASV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_3005 | - | - | 100% (376) | 2-nitropropane dioxygenase, NPD |
| M. vanbaalenii PYR-1 | Mvan_5214 | - | 8e-89 | 46.61% (384) | 2-nitropropane dioxygenase, NPD |
| M. vanbaalenii PYR-1 | Mvan_0883 | - | 4e-83 | 45.48% (376) | 2-nitropropane dioxygenase, NPD |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1927c | - | 0.0 | 88.56% (376) | hypothetical protein Mb1927c |
| M. gilvum PYR-GCK | Mflv_3286 | - | 0.0 | 90.98% (377) | 2-nitropropane dioxygenase, NPD |
| M. tuberculosis H37Rv | Rv1894c | - | 0.0 | 88.56% (376) | hypothetical protein Rv1894c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0354c | - | 0.0 | 86.13% (375) | 2-nitropropane dioxygenase family oxidoreductase |
| M. marinum M | MMAR_2787 | - | 0.0 | 86.90% (374) | hypothetical protein MMAR_2787 |
| M. avium 104 | MAV_2807 | - | 0.0 | 89.36% (376) | oxidoreductase, 2-nitropropane dioxygenase family protein |
| M. smegmatis MC2 155 | MSMEG_3519 | - | 0.0 | 94.15% (376) | oxidoreductase, 2-nitropropane dioxygenase family protein |
| M. thermoresistible (build 8) | TH_0496 | - | 0.0 | 87.73% (375) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_1143 | - | 0.0 | 87.43% (374) | hypothetical protein MUL_1143 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1927c|M.bovis_AF2122/97 MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFTPEQLEIE
Rv1894c|M.tuberculosis_H37Rv MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFTPEQLEIE
MMAR_2787|M.marinum_M MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFTPEQLEIE
MUL_1143|M.ulcerans_Agy99 MHTAICDELGIEFPIFAFTHCRDVVLAVSKAGGFGVLGAVGFTPEQLEIE
MAV_2807|M.avium_104 MHTAICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFTPEQLEIE
Mvan_3005|M.vanbaalenii_PYR-1 MHTPLCDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFTPEQLEIE
MSMEG_3519|M.smegmatis_MC2_155 MHTALCDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGYTPEQLEIE
Mflv_3286|M.gilvum_PYR-GCK MHTPLCDQLGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFSPEQLEIE
MAB_0354c|M.abscessus_ATCC_199 MHTPICDELGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFTPEQLEIE
TH_0496|M.thermoresistible__bu MHTAICDQLGIEFPIFAFTHCRDVVVAVSKAGGFGVLGAVGFTPEQLEVE
***.:**:*****************:***************::*****:*
Mb1927c|M.bovis_AF2122/97 LNWIDEHIGDHPYGVDIVIPNKYEGMDSQ-LSADELAKTLRSMVPQEHLD
Rv1894c|M.tuberculosis_H37Rv LNWIDEHIGDHPYGVDIVIPNKYEGMDSQ-LSADELAKTLRSMVPQEHLD
MMAR_2787|M.marinum_M LTWIDEHIGDHPYGVDIVIPNKYEGMDSH-LSAEELANTLRSMVPQQHLD
MUL_1143|M.ulcerans_Agy99 LNWIDEHIGDHPYGVDIVIPNKYEGMDSH-LSAEELANTLRSMVPQQHLD
MAV_2807|M.avium_104 LKWIDENIGDHPYGVDIVIPNKYEGMDSH-LSAEELAETLRKMVPQEHLD
Mvan_3005|M.vanbaalenii_PYR-1 LNWIDENIGDHPYGVDIVIPNKYEGMDSN-MSADELKSTLNALVPQEHLD
MSMEG_3519|M.smegmatis_MC2_155 LNWIDEHIGDHPYGVDIVIPNKYEGMDAN-MSAEELKATLNSLVPQEHLD
Mflv_3286|M.gilvum_PYR-GCK LNWIDENIGDHPYGVDIVIPNKYEGMDAADMDPEVLKKTLNDLVPEEHID
MAB_0354c|M.abscessus_ATCC_199 LNWIDEHIGDHPYGVDIVIPNKYEGMDAN-MSAEELTKMLQSMVPQEHLD
TH_0496|M.thermoresistible__bu LNWIDEHIGDHPYGVDIVIPNKYEGMDAN-LTADELAEQLRAMVPQEHLD
*.****:********************: : .: * *. :**::*:*
Mb1927c|M.bovis_AF2122/97 FARKILADHGVPVEDADEDSLQLLGWTEATATPQVDAALKHPKMTMVANA
Rv1894c|M.tuberculosis_H37Rv FARKILADHGVPVEDADEDSLQLLGWTEATATPQVDAALKHPKMTMVANA
MMAR_2787|M.marinum_M FARKILADHGVPIEDADEDSLQLLGWTEATATPQVEVALEHSKVTMIANA
MUL_1143|M.ulcerans_Agy99 FARKILADHGVPIEDADEDSLQLLGWTEATATPQVEVALKHSKVTMIANA
MAV_2807|M.avium_104 FGKKILADHGVPIEDSDSDSLQLLGWTEATATPQVEVALKHPKVKMIANA
Mvan_3005|M.vanbaalenii_PYR-1 FAKKILADHGVPTDDSDDNALQLLGWTEATATPQVEVALRHPKMTLIANA
MSMEG_3519|M.smegmatis_MC2_155 FAKKILADHGVPTDELEDNALQLLGWTEATATPQVEIALKHPKMTLIANA
Mflv_3286|M.gilvum_PYR-GCK FAKKILSDHGVPVDHSDDDALQLLGWTEATATPQVEVALRHPKVTMIANA
MAB_0354c|M.abscessus_ATCC_199 FGRKLLADHGVPVEEGNDNALQLLGWTEATATPQVEIALRHPKMTLIANA
TH_0496|M.thermoresistible__bu FARKLLADNGVPVDELNDNALQLLGWTEATATPQVEIALRHPKMTLIANA
*.:*:*:*:*** :. :.::***************: **.*.*:.::***
Mb1927c|M.bovis_AF2122/97 LGTPPADMIKHIHDSGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGGH
Rv1894c|M.tuberculosis_H37Rv LGTPPADMIKHIHDSGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGGH
MMAR_2787|M.marinum_M LGTPPAEMIAHIHEQGRKVAALCGSPSQARKHANAGVDIIIAQGGEAGGH
MUL_1143|M.ulcerans_Agy99 LGTPPAEMIAHIHERGRKVAALCGSPSQARKHANAGVDIIIAQGGEAGGH
MAV_2807|M.avium_104 LGTPPADMIKHIHDAGLKVAALCGSPSQARKHADAGVDIIIAQGGEAGGH
Mvan_3005|M.vanbaalenii_PYR-1 LGTPPKDMIEHIHAEGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGGH
MSMEG_3519|M.smegmatis_MC2_155 LGTPPADMIKHIHDSGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGGH
Mflv_3286|M.gilvum_PYR-GCK LGTPPADMIKHIHDEGRVVAALCGSPSQARKHADAGVDIIIAQGGEAGGH
MAB_0354c|M.abscessus_ATCC_199 LGTPPADMIKHIHDAGRKVAALCGSPKQARKHADAGVDIVIAQGGEGGGH
TH_0496|M.thermoresistible__bu LGTPPADMIKHIHDSGRKVAALCGSPSQARKHADAGVDIIIAQGGEAGGH
***** :** *** * ********.******:*****:******.***
Mb1927c|M.bovis_AF2122/97 CGEVGSIVLWPQVVKEVAPVPVLAAGGIGSGQQIAAALALGTQGAWTGSQ
Rv1894c|M.tuberculosis_H37Rv CGEVGSIVLWPQVVKEVAPVPVLAAGGIGSGQQIAAALALGTQGAWTGSQ
MMAR_2787|M.marinum_M CGEVGSIVLWPQVVKEVAPVPVLAAGGIGSGQQIAAALVLGCQGAWTGSQ
MUL_1143|M.ulcerans_Agy99 CGEVGSIVLWPQVVKEVAPVPVLAAGGIGSGQQIAAALALGCQGAWTGSQ
MAV_2807|M.avium_104 CGEVGSIVLWPQVVKEVAPLPVLAAGGIGSGQQIAAALALGAQGAWTGSQ
Mvan_3005|M.vanbaalenii_PYR-1 SGEVGSIVLWPQVVKEVAPVPVLAAGGIGSGQQIAAALALGAQGAWTGSQ
MSMEG_3519|M.smegmatis_MC2_155 SGEVGSIVLWPQVVKEVAPVPVLAAGGIGSGQQIAAALALGAQGAWTGSQ
Mflv_3286|M.gilvum_PYR-GCK CGEVGSIVLWPQVVKEVAPVPVLAAGGIGSGQQIAAALALGAQGAWTGSQ
MAB_0354c|M.abscessus_ATCC_199 CGEVGSIVLWPQVVKEIAPVPVLAAGGIGSGYQIAAALAMGAQGAWSGSQ
TH_0496|M.thermoresistible__bu AGEIGSIVLWPQVVKEVAPIPVLAAGGIGSGQQIAAALALGAQGAWTGSQ
.**:************:**:*********** ******.:* ****:***
Mb1927c|M.bovis_AF2122/97 WLMVEEAANTAVQQAAYVKATSRDTVRSRSFTGKPARMLRNDWTEAWEQP
Rv1894c|M.tuberculosis_H37Rv WLMVEEAANTAVQQAAYVKATSRDTVRSRSFTGKPARMLRNDWTEAWEQP
MMAR_2787|M.marinum_M WLMVEEASNTPVQQAAYAKASSRDTVRSRSFTGKPARMLRNDWTEAWEQA
MUL_1143|M.ulcerans_Agy99 WLMVEEASNTPVQQAAYAKASSRDTVRSRSFTGKPARMLRNDWTEAWEQA
MAV_2807|M.avium_104 WLMVEESSNTPVQQAAYAKAGSRDTVRSRSFTGKPARMLRNDWTEAWEAP
Mvan_3005|M.vanbaalenii_PYR-1 WVMVEESENTPVQHAAYAKATSRDTVRSRSFTGKPARMLRNDWTEAWENP
MSMEG_3519|M.smegmatis_MC2_155 WVMVEESENTPVQHAAYVKATSRDTVRSRSFTGKPARMLRNDWTEAWENP
Mflv_3286|M.gilvum_PYR-GCK WVIVEESENTPVQHEAYIKAGSRDTVRSRSFTGKPARMLRNDWTEAWEDE
MAB_0354c|M.abscessus_ATCC_199 WLMVEEAENTAVQQETYVKATSRDTVRSRSFTGKPCRMLKNDWTEAWQTE
TH_0496|M.thermoresistible__bu WLMVEEAENTPVQQAAYAKATSKDTVRSRSFTGKPARMLRNKWTEAWEHP
*::***: **.**: :* ** *:************.***:*.*****:
Mb1927c|M.bovis_AF2122/97 ESPKPLGMPLQYMVSGMAVKATHKYPNETVDVAFNPVGQVVGQFTKVEKT
Rv1894c|M.tuberculosis_H37Rv ESPKPLGMPLQYMVSGMAVKATHKYPNETVDVAFNPVGQVVGQFTKVEKT
MMAR_2787|M.marinum_M DNPKPLGMPLQYMVSGMAVRATNKHPNETVDVAFNPVGQVVGQFTKVEKA
MUL_1143|M.ulcerans_Agy99 DNPKPLGMPLQYMVSGMAVRATNKYPNETVDVAFNPVGQVVGQFTKVEKA
MAV_2807|M.avium_104 GNPKPLGMPLQYMVSGMAVRATNKYPNESVDVAFNPVGQVVGQFTKVEKT
Mvan_3005|M.vanbaalenii_PYR-1 ENPKPLGMPLQYMVSGMAVAATHKYPNETVDVAFNPIGQVVGQFTKVEKT
MSMEG_3519|M.smegmatis_MC2_155 ENPKPLGMPLQYMVSGMAVAATHKYPNESVDVAFNPIGQVVGQFTKVEKT
Mflv_3286|M.gilvum_PYR-GCK NNPKPLGMPLQYMVSGMAVAATHKYPNESVDVAFNPIGQVVGQFTKVEKT
MAB_0354c|M.abscessus_ATCC_199 GNPEPLGMPLQYMVSGMAVAATHKFPDQTIDVAFNPIGQVVGQFTKVEKS
TH_0496|M.thermoresistible__bu DNPKPLPMPLQYMVSGMAVAATSRYPDQSVDVAFNPVGQVVGQFSKVEKC
.*:** ************ ** :.*::::******:*******:****
Mb1927c|M.bovis_AF2122/97 ATVIERWVQEYLEATARLDALNAAASV-
Rv1894c|M.tuberculosis_H37Rv ATVIERWVQEYLEATARLDALNAAASV-
MMAR_2787|M.marinum_M ATVIERWVQEYLEATNRLDELNAAAV--
MUL_1143|M.ulcerans_Agy99 ATVIERWVQEYLEATNRLDELNAAAV--
MAV_2807|M.avium_104 ATVIERWVQEYLEATNRLDELNEAASV-
Mvan_3005|M.vanbaalenii_PYR-1 ATVIERWVQEYLEATNTLNELNEAASV-
MSMEG_3519|M.smegmatis_MC2_155 SAVIERWVQEYLEATSTLNALNEAASV-
Mflv_3286|M.gilvum_PYR-GCK ATVIERWVQEYLEATGRLNELNEAASV-
MAB_0354c|M.abscessus_ATCC_199 AAVIERWVQEYLEATNTLNELNEAAASV
TH_0496|M.thermoresistible__bu ATVIERWVQEYLEATATLNELNEAAAR-
::************* *: ** **