For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VITRMSELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYSWLPLGLKVLRKIENIVRNEMNAIGGQE ILFPALLPRAPYETTNRWTEYGDTLFRLQDRRNNDYLLGPTHEEMFTLTVKGEYSSYKDFPLRLYQIQNK YRDEARPRAGILRGREFLMKDSYSFDIDDDGLKNAYIAHREAYQRIFDLLKVRYVIVSAVSGAMGGSASE EFLAESDVGEDTYVRCLQSGYAANVEAVVTMVPEPISSEQIAGLASATVHHTGDTPTIATLVDWANGADL GRTVTAADTLKNVMLKVREPGGEWELLGVGVPGDREVDDKRLGAALEPAEYAMLDDADFARYPFLVKGYI GPKALLANGVRYLVDPRVVDGTAWITGADELGKHVVDLVAGRDFTPDGTIEAAEVREGDPSPDGAGPLVA ARGIEIGHVFQLGRKYADAFGADVLGENGKPVRLTMGSYGIGVSRLVAVIAEQHHDELGLRWPSTVSPFD VHVVIANKDADARTGATELAAELDRLGVDVLLDDRTASPGVKFKDAELLGVPWIVVVGRGWADGIVELRD RFGGDKHEIPVDGAAERISAALAGA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_2308 | - | - | 100% (585) | prolyl-tRNA synthetase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2870c | proS | 0.0 | 82.76% (586) | prolyl-tRNA synthetase |
| M. gilvum PYR-GCK | Mflv_4045 | - | 0.0 | 88.83% (591) | prolyl-tRNA synthetase |
| M. tuberculosis H37Rv | Rv2845c | proS | 0.0 | 82.94% (586) | prolyl-tRNA synthetase |
| M. leprae Br4923 | MLBr_01553 | proS | 1e-07 | 29.05% (148) | prolyl-tRNA synthetase |
| M. abscessus ATCC 19977 | MAB_3140c | - | 0.0 | 82.30% (582) | prolyl-tRNA synthetase |
| M. marinum M | MMAR_1888 | proS | 0.0 | 81.54% (585) | prolyl-tRNA synthetase ProS |
| M. avium 104 | MAV_3700 | proS | 0.0 | 83.93% (585) | prolyl-tRNA synthetase |
| M. smegmatis MC2 155 | MSMEG_2621 | proS | 0.0 | 82.82% (588) | prolyl-tRNA synthetase |
| M. thermoresistible (build 8) | TH_1980 | proS | 0.0 | 82.91% (585) | PROBABLE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) |
| M. ulcerans Agy99 | MUL_2116 | proS | 0.0 | 81.37% (585) | prolyl-tRNA synthetase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2870c|M.bovis_AF2122/97 MITRMSELFLRTLRDDPADAEVASHKLLIRAGYIR-PVAPGLYSWLPLGL
Rv2845c|M.tuberculosis_H37Rv MITRMSELFLRTLRDDPADAEVASHKLLIRAGYIR-PVAPGLYSWLPLGL
MMAR_1888|M.marinum_M MITRMSELFLRTLRDDPADAEVPSHKLLIRAGYIR-PVGPGLYSWLPLGL
MUL_2116|M.ulcerans_Agy99 MITRMSELFLRTLRDDPADAEVPSHKLLIRAGYIR-PVGPGLYSWLPLGL
MAV_3700|M.avium_104 MITRMSQLFLRTLRDDPADAEVPSHKLLIRAGYIR-PVAPGLYSWLPLGL
Mvan_2308|M.vanbaalenii_PYR-1 MITRMSELFLRTLRDDPADAEVPSHKLLIRAGYVR-PVGPGLYSWLPLGL
Mflv_4045|M.gilvum_PYR-GCK MITRMSELFLRTLRDDPADAEVPSHKLLIRAGYVR-PVGPGLYSWLPLGL
MAB_3140c|M.abscessus_ATCC_199 MITRLSELFVRTLRDDPADAEVPSHKLLIRAGYVR-PVAPGVYSWLPLGL
MSMEG_2621|M.smegmatis_MC2_155 MITRMSELFLRTLRDDPADAEVPSHKLLIRAGYVR-AVGPGIYSWLPLGL
TH_1980|M.thermoresistible__bu VITRMSELFLRTLRDDPADAEVPSHKLLIRAGYIR-PVGPGLYSWLPLGL
MLBr_01553|M.leprae_Br4923 -----MGCNKRGVTRQEDDFSAWYNEVVAKAGLIDRGPAKGTMVIRPYGY
* : : * .. :::: :** : . * * *
Mb2870c|M.bovis_AF2122/97 RVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLK
Rv2845c|M.tuberculosis_H37Rv RVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLK
MMAR_1888|M.marinum_M RVLRNIERVIREEMNAIGGQEILFPALLPRAPYETTNRWTEYGDGVFRLQ
MUL_2116|M.ulcerans_Agy99 RVLRNIERVIREEMNAIGGQEILFPALLPRAPYETTNRWTEYGDGVFRLE
MAV_3700|M.avium_104 RVLRRIEHIVREEMNAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLQ
Mvan_2308|M.vanbaalenii_PYR-1 KVLRKIENIVRNEMNAIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLQ
Mflv_4045|M.gilvum_PYR-GCK KVLRKIEHIVRSEMDAIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLQ
MAB_3140c|M.abscessus_ATCC_199 RVLRKIENIVREEMNAIGGQEILLPALLPRAPYETTNRWTEYGDSLFRLK
MSMEG_2621|M.smegmatis_MC2_155 RVLRKIENVVRSEMNAIGAQEILLPALLPRGPYETTNRWTEYGDTLFRLQ
TH_1980|M.thermoresistible__bu RVLRNIEEIVRQEMVAIGGQEILFPALLPRGPYETTNRWSEYGDTLFRLK
MLBr_01553|M.leprae_Br4923 RIWELLQDELDSKIKELGHENAYFPMLIPENYFNREAEHVEGFHPELAVV
:: . :: : .:: :* :: :* *:*. :: . : . : :
Mb2870c|M.bovis_AF2122/97 DRRGND-----YLLGPTHEELFTLTVKGEYSSYKDFPLTLYQIQTKYRDE
Rv2845c|M.tuberculosis_H37Rv DRRGND-----YLLGPTHEELFTLTVKGEYSSYKDFPLTLYQIQTKYRDE
MMAR_1888|M.marinum_M DRRGND-----YLLGPTHEELFTLTVKGEYNSYKDFPLTLYQIQIKYRDE
MUL_2116|M.ulcerans_Agy99 DRRGND-----YLLGPTHEELFTLTVKGEYNSYKDFPLTLYQIQIKYRDE
MAV_3700|M.avium_104 DRRGND-----YLLGPTHEELFTLTVKGEYSSYKDFPVLLYQIQNKYRDE
Mvan_2308|M.vanbaalenii_PYR-1 DRRNND-----YLLGPTHEEMFTLTVKGEYSSYKDFPLRLYQIQNKYRDE
Mflv_4045|M.gilvum_PYR-GCK DRRDND-----YLLGPTHEEMFTLTVKGEYSSYKDFPLRLYQIQNKYRDE
MAB_3140c|M.abscessus_ATCC_199 DRRDND-----MMLGPTHEELFALTVKGEYSSYKDFPVILYQVQTKYRDE
MSMEG_2621|M.smegmatis_MC2_155 DRRNND-----YLLGPTHEELFTLTVKGEYSSYKDFPVILYQIQTKYRDE
TH_1980|M.thermoresistible__bu DRRDND-----YLLGPTHEELFTLTVKGEYSSYKDFPLLLFQIQTKYRDE
MLBr_01553|M.leprae_Br4923 THAGGKELSEPLVIRPTSETVIGDMMAKWITSHRDLPLRLNQWSNVVRWE
: ... :: ** * :: : .*::*:*: * * . * *
Mb2870c|M.bovis_AF2122/97 ARPRAGILRAREFVMKDSYSFDIDAAGLKAAYRAHREAYQRIFDRLQVRY
Rv2845c|M.tuberculosis_H37Rv ARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQRIFDRLQVRY
MMAR_1888|M.marinum_M ARPRAGILRAREFVMKDSYSFDIDSGGLKAAYHAHREAYQRIFDRLRVRY
MUL_2116|M.ulcerans_Agy99 ARPRAGILRAREFVMKDSYSFDIDSGGLKAAYHAHREAYQRIFDRLRVRY
MAV_3700|M.avium_104 ARPRAGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAYQRIFARLQVRY
Mvan_2308|M.vanbaalenii_PYR-1 ARPRAGILRGREFLMKDSYSFDIDDDGLKNAYIAHREAYQRIFDLLKVRY
Mflv_4045|M.gilvum_PYR-GCK ARPRAGILRGREFLMKDSYSFDVDDDGLKNAYHAHREAYQRIFDRLKVRY
MAB_3140c|M.abscessus_ATCC_199 ARPRAGILRGREFVMKDSYSFDTSDDGLKAAYHAHRDAYQRIFGRLGLDY
MSMEG_2621|M.smegmatis_MC2_155 ARPRAGILRGREFVMKDSYSFDVDDDGLKNAYYQHREAYQRIFARLGVRY
TH_1980|M.thermoresistible__bu ARPRAGILRGREFVMKDSYSFDVDDAGLKAVYQAHRDAYQRIFDRLGVRY
MLBr_01553|M.leprae_Br4923 LRPRM-LLRTIEFLWQEGHSAHIE----KSDALRETLFALDIYTTLARDM
*** :** **: ::.:* . . * . *: *
Mb2870c|M.bovis_AF2122/97 VIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYTANVEAVVTARPD
Rv2845c|M.tuberculosis_H37Rv VIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARPD
MMAR_1888|M.marinum_M VIVSAVSGAMGGSASEEFLAESPVGEDTFVRCVESGYAANVEAVVTARPE
MUL_2116|M.ulcerans_Agy99 VIVSAVSGAMGGSASEEFLAESPVGEDTFVRCVESGYAANVEAVVTARPE
MAV_3700|M.avium_104 VIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVITARPD
Mvan_2308|M.vanbaalenii_PYR-1 VIVSAVSGAMGGSASEEFLAESDVGEDTYVRCLQSGYAANVEAVVTMVPE
Mflv_4045|M.gilvum_PYR-GCK VIVSAVSGAMGGSASEEFLAESEVGEDTFVRCAQSGYAANVEAVVTTAPD
MAB_3140c|M.abscessus_ATCC_199 VIVAATSGAMGGSASEEFLAESPTGEDTFVRCVESGYAANVEAVITPAPP
MSMEG_2621|M.smegmatis_MC2_155 VIVSAVSGAMGGSASEEFLAESEVGEDTFVRCVESGYAANVEAVITRAPE
TH_1980|M.thermoresistible__bu VIVSAVSGAMGGSASEEFLAESEVGEDTFVRCPESGYAANVEAVVTPAPE
MLBr_01553|M.leprae_Br4923 AAIPIVSGEK--TAGERFAGALN--------------TYTIEAMMRDG--
. :. .** :*.*.* . : .:**::
Mb2870c|M.bovis_AF2122/97 TLP---IDGLPEAVVHDTGDTPTIASLVAWANEADL----GRTVTAADTL
Rv2845c|M.tuberculosis_H37Rv TLP---IDGLPEAVVHDTGDTPTIASLVAWANEADL----GRTVTAADTL
MMAR_1888|M.marinum_M SLP---IDGQPDAVVHDTGETPTIATLVAWANEAGL----GREVSAADTL
MUL_2116|M.ulcerans_Agy99 SLP---IDGQPDAVVHDTGETPTIATLVAWANEAGL----GREVSAADTL
MAV_3700|M.avium_104 PQP---VEGLPEAVVHDTGDTPTIATLVDWANRAGL----GRTVTAADTL
Mvan_2308|M.vanbaalenii_PYR-1 PISSEQIAGLASATVHHTGDTPTIATLVDWANGADL----GRTVTAADTL
Mflv_4045|M.gilvum_PYR-GCK PIP---LDGLPEAVVYDTPDTPTIATLVDWANTADLPSFAGRAVTAADTL
MAB_3140c|M.abscessus_ATCC_199 ARP---IEGLAEAVVHETGDTPTIATLVDWANSAGL----GRTVTAADTL
MSMEG_2621|M.smegmatis_MC2_155 AQP---TEGLPEAKVYDTPDTPTIATLVEWANSASLPQFEGRTVTAADTL
TH_1980|M.thermoresistible__bu PRP---IDGLPEPKVYDTPDTATIATLVDWANRADLPGFEGREVTAADTL
MLBr_01553|M.leprae_Br4923 -------KALQSATTHYLGDNFARAFNIRYTTAEEQ--------------
. .. .: :. : * : ::.
Mb2870c|M.bovis_AF2122/97 KNVLIKVRQPGGDTELLAIGVPGDREVDDKRLGAALEPADYALLDDDDFA
Rv2845c|M.tuberculosis_H37Rv KNVLIKVRQPGGDTELLAIGVPGDREVDDKRLGAALEPADYALLDDDDFA
MMAR_1888|M.marinum_M KNVLMKIRQPGGEWELLAIGVPGDREIDEKRLAAALDPAEYVFLDDDDFG
MUL_2116|M.ulcerans_Agy99 KNVLMKIRQPGGEWELLAIGVPGDREIDEKRLAAALDPAEYVFLDDDDFG
MAV_3700|M.avium_104 KNVLLKVRQPGGDWELLAIGLPGDREVDDKRLGAALEPAEYVLLDDADFA
Mvan_2308|M.vanbaalenii_PYR-1 KNVMLKVREPGGEWELLGVGVPGDREVDDKRLGAALEPAEYAMLDDADFA
Mflv_4045|M.gilvum_PYR-GCK KNVLLKVREPGGDWELLAIGVPGDREVDDKRLGAALDPAEYAMADDADFA
MAB_3140c|M.abscessus_ATCC_199 KNILLKVRQPGGDWELLAVGVPGDREVDDKRLGAALEPAEYELLGDADFA
MSMEG_2621|M.smegmatis_MC2_155 KNVLLKTREPGGEWELLAVGVPGDREVDEKRLGAALEPAEFALLDDADFA
TH_1980|M.thermoresistible__bu KNVVLKVREPGGDWELLAIGLPGDREVDDKRLGAALDPAEYEFLDDADFA
MLBr_01553|M.leprae_Br4923 -QAFVHTTSFGLSTRMIGAIVMVHGDDKGLVLPPQVAPYQVVIVPITTGN
: .:: . * . .::. : . : . * . : * : :
Mb2870c|M.bovis_AF2122/97 KHPFLVKGYIG-PKALRENNVRYLVDPRIVDGTSWITGADQPGRHVVGLV
Rv2845c|M.tuberculosis_H37Rv KHPFLVKGYIG-PKALRENNVRYLVDPRIVDGTSWITGADQPGRHVVGLV
MMAR_1888|M.marinum_M KYPFLVKGYIG-PKALRSNDVRYLLDPRVVDGTSWITGADEPGRHVVGLV
MUL_2116|M.ulcerans_Agy99 KYPFLVKGYIG-PKALRSNDVRYLLDPRVVDGTSWITGADEPGRHVVGLV
MAV_3700|M.avium_104 RYPFLVKGYIG-PKALKDNGVRYLVDPRVVDGTSWITGADEPGRHVVGLV
Mvan_2308|M.vanbaalenii_PYR-1 RYPFLVKGYIG-PKALLANGVRYLVDPRVVDGTAWITGADELGKHVVDLV
Mflv_4045|M.gilvum_PYR-GCK AHPFLKKGYIG-PKALLANGVRYLVDPRVVDGTAWITGADETGRHVVDLV
MAB_3140c|M.abscessus_ATCC_199 KYPFLVRGYIG-PKALLANGVRYLVDPRVVEGTSWITGADEPGKHVVDLV
MSMEG_2621|M.smegmatis_MC2_155 ANPFLVKGYVG-PKALQDNGVRYLVDPRVVHGSSWITGADAPNRHVVGLV
TH_1980|M.thermoresistible__bu RHPFLAKGYIG-PKALQANGVRYLVDPRVVTGTSWITGADEPGRHVVGLV
MLBr_01553|M.leprae_Br4923 KASEVGHAAADLARRLQAAGVRTHVDARPQLTPGWKYNEWELRGVPIRLE
. : :. . .: * .** :*.* ..* . : *
Mb2870c|M.bovis_AF2122/97 AGRDFTADGTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDA
Rv2845c|M.tuberculosis_H37Rv AGRDFTADGTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDA
MMAR_1888|M.marinum_M AGRDFTADGTIEAAEVREGDPAPDGAGQLVMARGIEIGHIFQLGRKYTDA
MUL_2116|M.ulcerans_Agy99 AGRDFTADGTIEAAEVREGDPAPDGAGQLVMARGIEIGHIFQLGRKYTDA
MAV_3700|M.avium_104 AGRDFTADGTIEAAEVRDGDPSPDGAGPLVSARGIEVAHIFQLGRKYTDA
Mvan_2308|M.vanbaalenii_PYR-1 AGRDFTPDGTIEAAEVREGDPSPDGAGPLVAARGIEIGHVFQLGRKYADA
Mflv_4045|M.gilvum_PYR-GCK AGRDFTPDGTIEAAEVREGDPSPDGAGPLVAARGIEIGHVFQLGRKYADA
MAB_3140c|M.abscessus_ATCC_199 AGRDFTADGTIEAAEVRDGDPSPDGAGQLVSARGIEIGHIFQLGRKYTDA
MSMEG_2621|M.smegmatis_MC2_155 AGRDFTPDGTIEAAEVRDGDPSPDGAGVLTSARGIEIGHIFQLGRKYTDA
TH_1980|M.thermoresistible__bu AGRDFTPDGTIEAAEVRDGDPSPDGAGTLVSARGIEIGHIFQLGRKYTDA
MLBr_01553|M.leprae_Br4923 LG------------------PRDLEAGTTVMVR--------RIGEKAKQP
* * ** . .* ::* * :.
Mb2870c|M.bovis_AF2122/97 FTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDELGLRWPSTVAPF
Rv2845c|M.tuberculosis_H37Rv FTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDELGLRWPSTVAPF
MMAR_1888|M.marinum_M FTADVLGEDGKPVRLTMGSYGIGVSRLVAVIAEQHHDNLGLRWPAEIAPF
MUL_2116|M.ulcerans_Agy99 FTADVLGEDGKPVRLTMGSYGIGVSRLVAVIAEQHHDNLGLRWPAEIAPF
MAV_3700|M.avium_104 FTADVLGEDGKPVRLTMGSYGLGVSRMVAVIAEQHHDELGLRWPASVAPF
Mvan_2308|M.vanbaalenii_PYR-1 FGADVLGENGKPVRLTMGSYGIGVSRLVAVIAEQHHDELGLRWPSTVSPF
Mflv_4045|M.gilvum_PYR-GCK FNADVLGENGKPVRLTMGSYGIGVSRLVAVIAEQHHDELGLRWPGSVAPF
MAB_3140c|M.abscessus_ATCC_199 FTVDVLGENGKPVRLTQGSYGIGVSRLVAVVAEQQHDELGLRWPSAVSPF
MSMEG_2621|M.smegmatis_MC2_155 FSADVLGEDGKPLRLTMGSYGIGVSRLVAVIAEQQHDQLGLRWPSSVAPF
TH_1980|M.thermoresistible__bu FNVDVLGEDGKPVRLTMGSYGIGVSRLVAVIAEQHHDELGLRWPSSVAPF
MLBr_01553|M.leprae_Br4923 IAIAAAP-----------------TELPGILEEFQRTLLER---ATQFRD
: . :.: .:: * :: * .
Mb2870c|M.bovis_AF2122/97 DVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELL
Rv2845c|M.tuberculosis_H37Rv DVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELL
MMAR_1888|M.marinum_M GVHLVIANKDAEARAGAIGLASELDGLGVEVLLDDRQASPGVKFKDAELL
MUL_2116|M.ulcerans_Agy99 GVHLVIANKDAEARAGAIGLAGELDGLGVEVLLDDRQASPGVKFKDAELL
MAV_3700|M.avium_104 DVHLVIANKDAQARAGATALADDLDRLGVEVLLDDRQASPGVKFKDAELL
Mvan_2308|M.vanbaalenii_PYR-1 DVHVVIANKDADARTGATELAAELDRLGVDVLLDDRTASPGVKFKDAELL
Mflv_4045|M.gilvum_PYR-GCK AVHVVIANKDAEARAGATELATALDRAGADVLLDDRTASPGVKFKDAELL
MAB_3140c|M.abscessus_ATCC_199 DVHVVIANKDDAARAGAEELAAELDRLGHEVLLDDRTASPGVKFKDAELL
MSMEG_2621|M.smegmatis_MC2_155 DVHVVVANKDAGARAGAAELVADLDRLGHEVLFDDRQASPGVKFKDAELL
TH_1980|M.thermoresistible__bu DVHVVIANKDSAARAGAEQLAADLDRLGLQVLLDDRTASPGVKFKDAELL
MLBr_01553|M.leprae_Br4923 DHTTLVDNWDAFATTVATGWALAIH-CGNPECEEDIKAETAATPRCVPRQ
:: * * * : * . :. * :* *..... : .
Mb2870c|M.bovis_AF2122/97 GMPWIVVVGRGWADGVVELRDRFSGQTRELVAGAS---LATDIAAAVTG-
Rv2845c|M.tuberculosis_H37Rv GMPWIVVVGRGWADGVVELRDRFSGQTRELVAGAS---LATDIAAAVTG-
MMAR_1888|M.marinum_M GMPWVVVVGRGWADGVVELRDRFGGQTRELTVGDS---LATDIAAAISG-
MUL_2116|M.ulcerans_Agy99 GMPWVVVVGRGWADGVVELRDRFGGQTRELTVGDS---LATDIAAAISG-
MAV_3700|M.avium_104 GVPWIVVVGRGWADGVVELRDRFAGQTRELATGPS---LAADIAAALRG-
Mvan_2308|M.vanbaalenii_PYR-1 GVPWIVVVGRGWADGIVELRDRFGGDKHEIPVDG----AAERISAALAGA
Mflv_4045|M.gilvum_PYR-GCK GVPWIVVVGRGWADGVVELRDRFSGEKREIPVGPDT-TAAEQILAAITG-
MAB_3140c|M.abscessus_ATCC_199 GVPWIVVIGRGWADGTIELRNRFTGETQPIAVTD----AVASVTQAIG--
MSMEG_2621|M.smegmatis_MC2_155 GMPWIVVVGRGWADGVVELRNRFTGETREIAADG----AAAEISSVLAG-
TH_1980|M.thermoresistible__bu GMPWIVVVGRGWANGVVEVRNRFTGETREVAVADRSGDAAAEIGDLVRA-
MLBr_01553|M.leprae_Br4923 GAPATGRCIRCDAPSAYDKRVIFARAY-----------------------
* * * * . : * *