For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RRPARLFRTTVSMAAAVSALAGCATADSSAPPVSGGPQLTVVAPLGTMAPLPEAPPDEPAATFAGLAQRE MQATTQAAEAGAEITAAVLDRNTGQLVTNGNGMKIAIASVVKLFIADDLLLQVANGQTELSPEDRKSLDV MLRASDDSAAEVFWNRSGGSAIIDRVVKRYGLSSTSRPGNGRWFNTISTATDLVRYYDMLLSGAGGLPRE QANIILSNLAASTPTAPDGMVPGGVYPQRFGIPEGLYAEPVAVKQGWMCCVGADWMHLSTGVVGLSRRYV MVIGSMQPAGDDAARRTITDAVKTMFPGGRI*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_2191 | - | - | 100% (312) | putative alanine rich lipoprotein LppW |
| M. vanbaalenii PYR-1 | Mvan_5916 | - | 7e-99 | 59.81% (316) | beta-lactamase |
| M. vanbaalenii PYR-1 | Mvan_3689 | - | 5e-11 | 28.38% (229) | hypothetical protein Mvan_3689 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2929 | lppW | 1e-93 | 56.88% (320) | alanine rich lipoprotein LppW |
| M. gilvum PYR-GCK | Mflv_4171 | - | 1e-143 | 80.13% (312) | putative alanine rich lipoprotein LppW |
| M. tuberculosis H37Rv | Rv2905 | lppW | 1e-93 | 56.88% (320) | alanine rich lipoprotein LppW |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3225 | - | 2e-89 | 55.81% (301) | putative lipoprotein LppW precursor |
| M. marinum M | MMAR_1803 | lppW | 6e-87 | 52.48% (322) | alanine rich lipoprotein LppW |
| M. avium 104 | MAV_3761 | - | 5e-93 | 54.15% (325) | LppW protein |
| M. smegmatis MC2 155 | MSMEG_2439 | - | 1e-122 | 70.25% (316) | LppW protein |
| M. thermoresistible (build 8) | TH_1402 | lppW | 7e-79 | 60.17% (241) | PROBABLE CONSERVED ALANINE RICH LIPOPROTEIN LPPW |
| M. ulcerans Agy99 | MUL_2051 | lppW | 1e-86 | 52.17% (322) | alanine rich lipoprotein LppW |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_2191|M.vanbaalenii_PYR-1 MR-RPARLFRTTVSMAAAVS-ALAGCA-TADSSAPPVSGG----------
Mflv_4171|M.gilvum_PYR-GCK MP-RPRRLITATALASAVAT-VLAGCT-PAGHGAPPVSAG----------
MSMEG_2439|M.smegmatis_MC2_155 MRGRPSRLVTATAVSAIAML-VASGCEDPRVYGGFAAPDA----------
Mb2929|M.bovis_AF2122/97 MRARPLTLLTALAAVTLVV---VAGCEARVEAEAYSAADRISSRPQARPQ
Rv2905|M.tuberculosis_H37Rv MRARPLTLLTALAAVTLVV---VAGCEARVEAEAYSAADRISSRPQARPQ
MMAR_1803|M.marinum_M MRARPLTMLTAAAAVALVVSLVLTGCEAKVQAKAYGTDDRESSRQQSQPQ
MUL_2051|M.ulcerans_Agy99 MRARPLTMLTAAAAVALVVSLVLTGCEAKVQAKAYGTDDRESSRQQSQPQ
MAV_3761|M.avium_104 MRVRPLTLFTATAAVTLLI---AAGSEALVQAKVYHLPVAAPVRVLTQPP
TH_1402|M.thermoresistible__bu --------------------------------------------------
MAB_3225|M.abscessus_ATCC_1997 MRGQHLFVGLTLTAATALTS----GCVASVRSD-----------------
Mvan_2191|M.vanbaalenii_PYR-1 PQLTVVAPLGTMAPLPEAPPDEPAATFAGLAQREMQATTQAAEAGAEITA
Mflv_4171|M.gilvum_PYR-GCK PHLTVVAPLGRLAPLPEAPPDEPPAAFTRLADLERQATSKAAAAGADITA
MSMEG_2439|M.smegmatis_MC2_155 PQLTVVVPQGGMAPLPEAPPDEPAASFLGLQDRAMLATNQAADAGADITM
Mb2929|M.bovis_AF2122/97 PQ-PVELLLRAITPPRAPAAS-PNVGFGELPTRVRQATDEAAAMGATLSV
Rv2905|M.tuberculosis_H37Rv PQ-PVELLLRAITPPRAPAAS-PNVGFGELPTRVRQATDEAAAMGATLSV
MMAR_1803|M.marinum_M QQQLIELLLRAITPPEDPAALLPSAGLVGVQERIQRATEEAAAKGATITV
MUL_2051|M.ulcerans_Agy99 QQQLIELLLRAITPPEDPAALLPSAGLVGVQERIQRATEEAAAKGATITV
MAV_3761|M.avium_104 PPQSAALMLEAATPPQPPQAL-PNAGFAQLPARIQQAADQAAASGAALSV
TH_1402|M.thermoresistible__bu --------LSTTSTPX-------------------QATADAAASGADITI
MAB_3225|M.abscessus_ATCC_1997 PATPVLAVVSAPAETPPVFEVESPTSFETLPERTTAATTQAKSAGATLTA
: *: .* ** ::
Mvan_2191|M.vanbaalenii_PYR-1 AVLDRNTGQLVTNGNGMKIAIASVVKLFIADDLLLQVANGQTELSPEDRK
Mflv_4171|M.gilvum_PYR-GCK AVLDRNTGELVTNGNDMTMAIASVVKVFIADDLLLQVAQRRTGLSPQDRK
MSMEG_2439|M.smegmatis_MC2_155 LVLDRNTGQLVSNGNEQSIAIASVVKLFIADDLLLQEAKGQTVLSADDRK
Mb2929|M.bovis_AF2122/97 AVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPEDHH
Rv2905|M.tuberculosis_H37Rv AVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPEDHH
MMAR_1803|M.marinum_M AILDRATHQLVSNGKTSIIATASVSKLFIADELLLRASQGKTTLSAQDRQ
MUL_2051|M.ulcerans_Agy99 AILDRATHQLVSNGKTSIIATASVSKLFIADELLLRASQGKTTLSAQDRQ
MAV_3761|M.avium_104 AILDRGTHQLVSIGNGQIVGTASVAKLFIADDLLLHQAEGKAALSADDRQ
TH_1402|M.thermoresistible__bu AVLDRSTGQAASSGGDTPFPIASVVKLFIADDLLLQESEGKTQLSDADRA
MAB_3225|M.abscessus_ATCC_1997 VIKDRASGAVVSNGNNSTIAIASVAKLFIADDLLMRESQGEVTLTPADRA
: ** : .: * . *** *:****:**: :: .. *: *:
Mvan_2191|M.vanbaalenii_PYR-1 SLDVMLRASDDSAAEVFWNRSGGSAIIDRVVKRYGLSSTSRPGNGRWFNT
Mflv_4171|M.gilvum_PYR-GCK SLEVMLRSSDDSAAEVFWNRSGGAAIIDRVVKRYGLTSTRRPTDGRWFNT
MSMEG_2439|M.smegmatis_MC2_155 MLDVMLRSSDDDAAEIFWNRSGGDPIVTRVAARYGLTSTKPPNDGRWWNT
Mb2929|M.bovis_AF2122/97 ALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPSDGRWWNT
Rv2905|M.tuberculosis_H37Rv ALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPSDGRWWNT
MMAR_1803|M.marinum_M ALDNMLRSSDDGAAEQFWGELGGDAIVTEIATRYGLAATAPPSDGRWWNT
MUL_2051|M.ulcerans_Agy99 ALDNMLRSSDDGAAEQFWGELGGDAIVTEIATRYGLAATAPPSDGRWWNT
MAV_3761|M.avium_104 ALDIMLQSSDDGAAERFWGQGGGAAIISEVASRYGLTSTTPPGDGRWWNT
TH_1402|M.thermoresistible__bu ALDLMLRSSDDGAAQMFWDRNGGNAVISRIVARYGLTGTTPPYNGHWDVT
MAB_3225|M.abscessus_ATCC_1997 AFDRMLQSSDDSAAEVFWQRGGGNSIITRVAARYGLASTNVPSDGMWWNT
:: **::***.**: ** . ** .:: .:. **** .* * :* * *
Mvan_2191|M.vanbaalenii_PYR-1 ISTATDLVRYYDMLLSGAGGLPREQANIILSNLAASTPTAPDGMVPGGVY
Mflv_4171|M.gilvum_PYR-GCK ISTATDLVRYYDMLLSGAGGLPRAQADVIVSNLAASTPTAPDGMVPGGVY
MSMEG_2439|M.smegmatis_MC2_155 KSTAADLVRYYDMLMSGRGGLPPEQANVILSNLAQSTPEAKDTTQPGGVY
Mb2929|M.bovis_AF2122/97 ISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDG------Y
Rv2905|M.tuberculosis_H37Rv ISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDG------Y
MMAR_1803|M.marinum_M FSSAPDLIRYYEMLLDGEGGLPLQSAAIIVNDLAQSTPNGIDG------Y
MUL_2051|M.ulcerans_Agy99 FSSAPDLIRYYEMLLDGEGGLPLQSAAIIVNDLAQSTPNGIDG------Y
MAV_3761|M.avium_104 MSSVTDLIRYYDMLLDGSGGLPADQARIIVSDLAQSTPNGVDG------Y
TH_1402|M.thermoresistible__bu LSTANDLIRYYDKLLDGSGGLPREQAAIIIDNIARFTPSGVDG------Y
MAB_3225|M.abscessus_ATCC_1997 ISTANDLVQYYDMLLSGTGGLPPERANIIVDDLSRSTPNGIDG------Y
*:. **::**: *:.* **** * :*: ::: ** . * *
Mvan_2191|M.vanbaalenii_PYR-1 PQRFGIPEGLYAEPVAVKQGWMCCVG-ADWMHLSTGVVGLSRRYVMVIGS
Mflv_4171|M.gilvum_PYR-GCK PQRFGIPEGLFAEPVAVKQGWMCCIG-ADWMHLSTGVIGRDRRYVMVIGS
MSMEG_2439|M.smegmatis_MC2_155 PQRFGIPDGLYAEPVAVKQGWMCCIG-GDWMHLSTGVIGPDRRFVMVIGA
Mb2929|M.bovis_AF2122/97 PQRFGIPDGLYAEPVAVKQGWMCCIG-SSWMHLSTGVIGPERRYIMVIES
Rv2905|M.tuberculosis_H37Rv PQRFGIPDGLYAEPVAVKQGWMCCIG-SSWMHLSTGVIGPERRYIMVIES
MMAR_1803|M.marinum_M PQRFGIPDGLYAEPVAVKQGWMCCIG-ADWMHLSTGIIGSDRRYIMVIES
MUL_2051|M.ulcerans_Agy99 PQRFGIPDGLYAEPVAVKQGWMCCIG-ADWMHLSTGIIGSDRRYIIVIES
MAV_3761|M.avium_104 PQRFGIPDGLYAEPVAVKQGWMCCIG-ADWMHLSTGVIGADRRYIMVVQS
TH_1402|M.thermoresistible__bu PQRFGIPDGLHGERVAVKQGWFCCWNGANQLHVSSGTIGPDHRYVMVISS
MAB_3225|M.abscessus_ATCC_1997 PQRFGIPDGIPGEPVAVKQGWMCCVG-SAWMHLSTGVVGPDRRFIVVVSS
*******:*: .* *******:** . . :*:*:* :* .:*:::*: :
Mvan_2191|M.vanbaalenii_PYR-1 MQPAGDDAARRTITDAVKTMFPGGRI-------
Mflv_4171|M.gilvum_PYR-GCK MQAGGDDAARRTITDAVKTMFPDGRI-------
MSMEG_2439|M.smegmatis_MC2_155 LQPTDATTARETITDAVKTMFPGGRI-------
Mb2929|M.bovis_AF2122/97 LQPADDATARATITQAVRTMFPNGRI-------
Rv2905|M.tuberculosis_H37Rv LQPADDATARATITQAVRTMFPNGRI-------
MMAR_1803|M.marinum_M LQASDDATARETITQAVKTIFPAGRI-------
MUL_2051|M.ulcerans_Agy99 LQASDDATARETITQAVKTIFPAGRI-------
MAV_3761|M.avium_104 LQPADDATARETITRAVKTIFPDGRIEAPPHGL
TH_1402|M.thermoresistible__bu LDPTSEAAARENITRAVKTVFPEGRI-------
MAB_3225|M.abscessus_ATCC_1997 LQTANDVTARNTLTQAVATMFPGGRIETE----
::. . :** .:* ** *:** ***