For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATVSEPHSWDLCVMHAGRITAPRGWELVRHAGPLPS HPDDDDLVALADAVREGRDAAPVAGFTVGFSDPVTGAHGGALMAPPARRPETNGRRRGHLRVLPDPTD
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1736 | - | - | 100% (138) | hypothetical protein Mvan_1736 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3286c | - | 1e-56 | 72.67% (150) | hypothetical protein Mb3286c |
M. gilvum PYR-GCK | Mflv_4727 | - | 2e-72 | 86.21% (145) | hypothetical protein Mflv_4727 |
M. tuberculosis H37Rv | Rv3258c | - | 1e-56 | 72.67% (150) | hypothetical protein Rv3258c |
M. leprae Br4923 | MLBr_00762 | - | 2e-55 | 71.52% (151) | hypothetical protein MLBr_00762 |
M. abscessus ATCC 19977 | MAB_3604c | - | 2e-41 | 68.29% (123) | hypothetical protein MAB_3604c |
M. marinum M | MMAR_1284 | - | 6e-56 | 74.34% (152) | hypothetical protein MMAR_1284 |
M. avium 104 | MAV_4221 | - | 1e-45 | 69.63% (135) | hypothetical protein MAV_4221 |
M. smegmatis MC2 155 | MSMEG_1833 | - | 5e-68 | 84.17% (139) | hypothetical protein MSMEG_1833 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2603 | - | 4e-56 | 74.34% (152) | hypothetical protein MUL_2603 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1736|M.vanbaalenii_PYR-1 ------------------------------------MNVPRRCCRPGCPH Mflv_4727|M.gilvum_PYR-GCK MLAPGHGHDRNGWASAAPWLRVSGVMQAIVHANLLLVNVPRRCCRPGCPH MSMEG_1833|M.smegmatis_MC2_155 ------------------------------------MNVPRRCCRPGCPH Mb3286c|M.bovis_AF2122/97 -------------------MRVSGASAALVHDSLSVVNVPRRCCRPGCPH Rv3258c|M.tuberculosis_H37Rv -------------------MRVSGASAALVHDSLSVVNVPRRCCRPGCPH MMAR_1284|M.marinum_M -------------------MRVSAPSAAFPHDSLCLVNVPRRCCRPGCPH MUL_2603|M.ulcerans_Agy99 -------------------MRVSAPSAAFPHDSLCLVNVPRRCCRPGCPH MAV_4221|M.avium_104 -------------------------------------------------- MLBr_00762|M.leprae_Br4923 -------------------MRVSGASATFSHDSLSVVNVPRRCCRPGCPH MAB_3604c|M.abscessus_ATCC_199 -------------------------------------------------- Mvan_1736|M.vanbaalenii_PYR-1 YAVATLTFVYSDSTAVVGPLATVSEPHSWDLCVMHAGRITAPRGWELVRH Mflv_4727|M.gilvum_PYR-GCK YAVATLTFVYADSTAVVGPLATVSEPHSWDLCVMHAGRITAPRGWELVRH MSMEG_1833|M.smegmatis_MC2_155 YAVATLTFVYSDSTAVVGPLATVSEPHSWDLCVGHASRITAPKGWELVRH Mb3286c|M.bovis_AF2122/97 YAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH Rv3258c|M.tuberculosis_H37Rv YAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH MMAR_1284|M.marinum_M YAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH MUL_2603|M.ulcerans_Agy99 YAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH MAV_4221|M.avium_104 --MATLTFVYSDSTAVVGPLATAREPHSWDLCVNHAGRITAPRGWDLVRH MLBr_00762|M.leprae_Br4923 YAVATLTFVYSDSTAVVGPLATVREPHSWDLCVDHAARITAPRGWELVRH MAB_3604c|M.abscessus_ATCC_199 --MATLTFVYADSTAVVGPLATSSEPHSWDLCAQHASRITAPRGWELVRY :*******:*****:***** ********. **.*****:**:***: Mvan_1736|M.vanbaalenii_PYR-1 AGPLPSHPDDDDLVALADAVREGR---DAAPVAGFTVG----FSDPV--- Mflv_4727|M.gilvum_PYR-GCK AGPLPTHPDDDDLVALADAVREGREVPGAGVTAGFSAGLNTGFTDPV--- MSMEG_1833|M.smegmatis_MC2_155 AGPLPTHPDEDDLVALADAVREGR--TGPGPVNGVVAG----FSDPA--- Mb3286c|M.bovis_AF2122/97 AGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFP--- Rv3258c|M.tuberculosis_H37Rv AGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFP--- MMAR_1284|M.marinum_M AGPLPTHPDEDDLVALADAVREQGPTAD-ASCAGATGAAHNGFSDQVMRH MUL_2603|M.ulcerans_Agy99 AGPLPTHPDEDDLVALADAVREQGPTAD-ASCAGATGAAHNGFSDQVMRH MAV_4221|M.avium_104 AGPLPTHPDEDDLVALADAVREGGSAERTLPYAG-AAVPRNGFGDPHLHP MLBr_00762|M.leprae_Br4923 AGPLPSNPDEDDLVALADAVRE-GPGGEHGSYGNGARASLGGFADPQLQS MAB_3604c|M.abscessus_ATCC_199 NGPLPSNPEDDDLVALADAVRETT---------GGVRVAAAGFSEPA--- ****::*::************ . * : Mvan_1736|M.vanbaalenii_PYR-1 TGAHGGALMAPPARRPET-NGRRRGHLRVLPDPTD Mflv_4727|M.gilvum_PYR-GCK SGAHGGALMAPPARRPET-NGRRRGHLRVLPDPAE MSMEG_1833|M.smegmatis_MC2_155 TGTGSGAVIAPPVRQPEP-NGRRRGHLRVLPDPTD Mb3286c|M.bovis_AF2122/97 AAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD Rv3258c|M.tuberculosis_H37Rv AAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD MMAR_1284|M.marinum_M AGAHATAPSGGVLASPEHRSGRRRGHLRVLPDPSD MUL_2603|M.ulcerans_Agy99 AGAHATAPSGGVLASPEHRSGRRRGHLRVLPDPSD MAV_4221|M.avium_104 GGAQATAPSSSLIAPPEQRSGRRRGHLRVLPDPSD MLBr_00762|M.leprae_Br4923 AGAHATVPSGGLLAPSELRSGRRRGHLRVLPDPSD MAB_3604c|M.abscessus_ATCC_199 LDVSAPAPNVAPRPVHPAPVGRRRGHLRVLPDPSE . . *************::