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M. vanbaalenii PYR-1 Mvan_1605 (-)

annotation: ECF subfamily RNA polymerase sigma-24 factor
coordinates: 1703636 - 1704250
length: 204 

MEWCAVDAESREWLAQLNGHGNARTDAIRRLHELLVRVGRREVHRRGTRINGAELEDIVQQAASDATIAI
LRKLTAFRGDSRFTTWASRFVILEAASKIGRHHWRHPRPHLAHEDWEQIPERPGGEPSGQAEAADLWEAI
CHAVDTKLTDRQRRVFVGIVFEQIPADTLGSRLGMSRNALYKTVFDARRKIRAHLVDREYLPCG

Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_1605--100% (204)ECF subfamily RNA polymerase sigma-24 factor

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCK-----
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum M-----
M. avium 104-----
M. smegmatis MC2 155MSMEG_6682-9e-6463.13% (198) RNA polymerase sigma-70 factor, putative
M. thermoresistible (build 8)-----
M. ulcerans Agy99-----

CLUSTAL 2.0.9 multiple sequence alignment


Mvan_1605|M.vanbaalenii_PYR-1       MEWCAVDAESREWLAQLNG--HGNARTDAIRRLHELLVRVGRREVHRRGT
MSMEG_6682|M.smegmatis_MC2_155      -----MDAESREWLRLLDAGACPADRRTAIERLHERLLRVARREVHRRHT
                                         :********  *:.      *  **.**** *:**.******* *

Mvan_1605|M.vanbaalenii_PYR-1       RINGAELEDIVQQAASDATIAILRKLTAFRGDSRFTTWASRFVILEAASK
MSMEG_6682|M.smegmatis_MC2_155      AITGSELDDIAQQAASDATLSILGKLDSFRGESRFTTWAYKFVILEVAHK
                                     *.*:**:**.********::** ** :***:******* :*****.* *

Mvan_1605|M.vanbaalenii_PYR-1       IGRHHWRHPRPHLAHEDWEQIPERPGGEPSGQAEAADLWEAICHAVDTKL
MSMEG_6682|M.smegmatis_MC2_155      IGRHHWRHPPVALDTEDWNRLPERFGIDPSEHAEAAELSAAINRAVEATL
                                    *********   *  ***:::*** * :** :****:*  ** :**::.*

Mvan_1605|M.vanbaalenii_PYR-1       TDRQRRVFVGIVFEQIPADTLGSRLGMSRNALYKTVFDARRKIRAHLVDR
MSMEG_6682|M.smegmatis_MC2_155      TERQRQMFVAIVIQGTPLDALVVKLGVSRNAIYKTIFDARRKIREFLVTN
                                    *:***::**.**::  * *:*  :**:****:***:******** .** .

Mvan_1605|M.vanbaalenii_PYR-1       EYLPCG------
MSMEG_6682|M.smegmatis_MC2_155      EYLTNHVALERP
                                    ***.