For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LKTTEWTAVATAKELGRRRKLRVEVDGLAIALFQSEGRVYAFADVCVHQDRSLFKGTLLHGKVICPGHQW QFDLETGYEADQDRCQPTYPVRVDDDGTVYVKTEEASA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1326 | - | - | 100% (108) | Rieske (2Fe-2S) domain-containing protein |
| M. vanbaalenii PYR-1 | Mvan_1329 | - | 3e-05 | 32.89% (76) | Rieske (2Fe-2S) domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_2488 | - | 3e-05 | 27.88% (104) | Rieske (2Fe-2S) domain-containing protein |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4369c | - | 2e-06 | 35.06% (77) | putative ferredoxin subunit of phenylpropionate dioxygenase |
| M. marinum M | MMAR_3971 | - | 2e-06 | 36.62% (71) | oxidoreductase |
| M. avium 104 | MAV_3508 | - | 2e-09 | 34.23% (111) | Rieske (2Fe-2S) domain-containing protein |
| M. smegmatis MC2 155 | MSMEG_1459 | - | 2e-44 | 82.83% (99) | Rieske (2Fe-2S) domain-containing protein |
| M. thermoresistible (build 8) | TH_4003 | - | 1e-12 | 35.35% (99) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_3829 | - | 2e-06 | 36.62% (71) | oxidoreductase |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_1326|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1459|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3971|M.marinum_M --------------------------------------------------
MUL_3829|M.ulcerans_Agy99 --------------------------------------------------
MAB_4369c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4003|M.thermoresistible__bu --------------------------------------------------
Mflv_2488|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3508|M.avium_104 MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARN
Mvan_1326|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1459|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3971|M.marinum_M --------------------------------------------------
MUL_3829|M.ulcerans_Agy99 --------------------------------------------------
MAB_4369c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4003|M.thermoresistible__bu --------------------------------------------------
Mflv_2488|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3508|M.avium_104 TVTNALNGVWLGHPVHPPLASLTSGALGTTVALDALSVLPGQPASEVVDA
Mvan_1326|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1459|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3971|M.marinum_M --------------------------------------------------
MUL_3829|M.ulcerans_Agy99 --------------------------------------------------
MAB_4369c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4003|M.thermoresistible__bu --------------------------------------------------
Mflv_2488|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3508|M.avium_104 SRFATRALGVGILASLGSAVTGVTDWQHTHEEDRRVGAVHGLLNVAATAL
Mvan_1326|M.vanbaalenii_PYR-1 -------------------MKTTEWTAVATAKELGRRR------------
MSMEG_1459|M.smegmatis_MC2_155 --------------------MTANWVAVASRKELARRR------------
MMAR_3971|M.marinum_M -------------------MAPSTSNSASSSAEEHSEQEFGPSGIALSPY
MUL_3829|M.ulcerans_Agy99 -------------------MAPSTSNSASNSAEELSEQEFGPSGIALSPY
MAB_4369c|M.abscessus_ATCC_199 -------------------MSSG-------IRVAALEDIPEGEGIVV---
TH_4003|M.thermoresistible__bu -------------------MSGEHTDTLRWVRAACLDDVPGDE-------
Mflv_2488|M.gilvum_PYR-GCK -------------------MNNEKTPRLAQGREHVVATVDEIPPG-----
MAV_3508|M.avium_104 YVQSWFDRRRGRHGRGILLTALGYGITVAGSYLGGALVFESGIGIDQSGP
Mvan_1326|M.vanbaalenii_PYR-1 -------------------KLRVEVDGLAIALFQS-EGRVYAFADVCVHQ
MSMEG_1459|M.smegmatis_MC2_155 -------------------KLRVELDGLAIALFEA-AGRVYAFADACVHQ
MMAR_3971|M.marinum_M RFPTGWFIVAFSSELGAGEVKRVHYFGEELVLFRTASGRVHALDAYCQHL
MUL_3829|M.ulcerans_Agy99 RFPTGWFIVAFSSELGAGEVKRVHSFGEELVLFRTASGRVHALDAYCQHL
MAB_4369c|M.abscessus_ATCC_199 -------------------AKAIAGTADNVALLRDADGSVWALDDTCTHA
TH_4003|M.thermoresistible__bu -------------------PLGLVVDGIEIALFND-DGRIFALADRCTHG
Mflv_2488|M.gilvum_PYR-GCK -------------------THKLVPIGRHGVGVYNVNGTFYAIANYCPHE
MAV_3508|M.avium_104 RLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEVAAYGEFCPHL
: . . * . * * *
Mvan_1326|M.vanbaalenii_PYR-1 DRSLFKG------------------TLLHGKVICPGHQWQFDLETGYEAD
MSMEG_1459|M.smegmatis_MC2_155 DRSLVKG------------------TLLHGKVICPGHQWQFDLETGYEES
MMAR_3971|M.marinum_M GANLGVGG-----------------TVEGEHIVCPWHGWQWR-GDGTNAL
MUL_3829|M.ulcerans_Agy99 GANLGVGG-----------------TVEGEHIVCPWHGWQWR-GDGTNAL
MAB_4369c|M.abscessus_ATCC_199 DASLAEG------------------WVEDGYVECPLHSSKFCLKTGAVDG
TH_4003|M.thermoresistible__bu DARLSDG------------------YIEDGCIECPLHQALFDLATGEVRR
Mflv_2488|M.gilvum_PYR-GCK GGPLCSGRARGRNIVDESVPGDAVMVRDQEYIFCPWHQWGFELATGTTAV
MAV_3508|M.avium_104 AAPMADG------------------WLDRGRLVCPWHGSWFAAESGEVVR
: * : ** * : *
Mvan_1326|M.vanbaalenii_PYR-1 QDRCQPTYPVRVDDDG--------TVYVKT----------EEASA-----
MSMEG_1459|M.smegmatis_MC2_155 QGRCQPTYAVRVDDD---------TVYVDPTARMSPVTAGEEANA-----
MMAR_3971|M.marinum_M IPYSKIGCKNNVGIRSYPSIQWYGFILVWHERHGRPPYWEPPVLPELETN
MUL_3829|M.ulcerans_Agy99 IPYSKIGCKKNVRIRSYPSIQWYGFILVWQERHGRPPYWQPPVLPELETN
MAB_4369c|M.abscessus_ATCC_199 LPATKDTCPHRIEVRD-------GDIFLFPGEKPRPL-------------
TH_4003|M.thermoresistible__bu GPAFEPVRSFEIRIDG-------DDIIVGL--------------------
Mflv_2488|M.gilvum_PYR-GCK KPEWS-IRTYPVRVVG-------NDVLVQA--------------------
MAV_3508|M.avium_104 GPAAAPLPCYQARVVDG-------VVEVRGEQQPAPGGAVGIAKGGAS--
: :
Mvan_1326|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1459|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3971|M.marinum_M EYYPLHPHTRMLNRVKVHPQMIIENAADPYHVQYVHKAASPANTASFEVS
MUL_3829|M.ulcerans_Agy99 EYYSLHPHTRMLNRVKVHPQMIIENAADPYHVQYVHKAASPANTASFEVS
MAB_4369c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4003|M.thermoresistible__bu --------------------------------------------------
Mflv_2488|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3508|M.avium_104 --------------------------------------------------
Mvan_1326|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1459|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3971|M.marinum_M GYHLHATVNANFGGGRTKTWLTPNGPVDAKIIYDNYSLGLGIVRFPSELV
MUL_3829|M.ulcerans_Agy99 GYHLHATVNANFGGGRTKTWLTPNGPVDAKIVYDNYSLGLGIVRFPSELV
MAB_4369c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4003|M.thermoresistible__bu --------------------------------------------------
Mflv_2488|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3508|M.avium_104 --------------------------------------------------
Mvan_1326|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1459|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3971|M.marinum_M ATVQVTGQTPVDEDYTDYFYTQASIREPGDAGDVPTGRAARFLALQQEVI
MUL_3829|M.ulcerans_Agy99 ATVQVTGQTPVDEDYTDYFYTQASIRELGDAGDVPTGRAARFLALQQEVI
MAB_4369c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4003|M.thermoresistible__bu --------------------------------------------------
Mflv_2488|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3508|M.avium_104 --------------------------------------------------
Mvan_1326|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1459|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3971|M.marinum_M KQDFFTWENMKYLEKPNLAPEEARDYAALRRWAHRFYPAAQTSTADFGYT
MUL_3829|M.ulcerans_Agy99 KQDFFTWENMKYLEKPYLAPEEARDYAALRRWAHRFYPGAQTSPADFGYT
MAB_4369c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4003|M.thermoresistible__bu --------------------------------------------------
Mflv_2488|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3508|M.avium_104 --------------------------------------------------
Mvan_1326|M.vanbaalenii_PYR-1 ------------
MSMEG_1459|M.smegmatis_MC2_155 ------------
MMAR_3971|M.marinum_M ADGLPDPAASKA
MUL_3829|M.ulcerans_Agy99 ADGLPDPAASKA
MAB_4369c|M.abscessus_ATCC_199 ------------
TH_4003|M.thermoresistible__bu ------------
Mflv_2488|M.gilvum_PYR-GCK ------------
MAV_3508|M.avium_104 ------------