For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LGGWRCLYHRVVADPREVESDSTPEPHVSRVPQKVTRNSSPLTPIALLVALIAVGLAVWALLSMPEQQSA SATGAPLQGDAKERVCSAAHTVAMAVQRQTNANIGPEPAAVEAVAANARLAMLGGGDYLLSQISSDTPQD LADAARAFGTTLQQIGANALAGVPNDEDLQAGRIRDAEATRNKLSQLCSS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1268 | - | - | 100% (190) | hypothetical protein Mvan_1268 |
| M. vanbaalenii PYR-1 | Mvan_5239 | - | 3e-37 | 50.67% (150) | putative alanine and proline rich membrane protein |
| M. vanbaalenii PYR-1 | Mvan_2801 | - | 2e-22 | 41.67% (156) | putative alanine and proline rich membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2500 | - | 2e-17 | 34.72% (193) | alanine and proline rich membrane protein |
| M. gilvum PYR-GCK | Mflv_5087 | - | 7e-70 | 73.03% (178) | putative alanine and proline rich membrane protein |
| M. tuberculosis H37Rv | Rv2473 | - | 2e-17 | 34.72% (193) | alanine and proline rich membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_3933 | - | 3e-34 | 44.12% (170) | PUTATIVE putative putative alanine and proline rich membrane |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_1268|M.vanbaalenii_PYR-1 -----------------------------MGGWRCLYHRVVADPREVESD
Mflv_5087|M.gilvum_PYR-GCK ----------------------------------------MTDHRAQESG
TH_3933|M.thermoresistible__bu -----------------------------MSTSISSSKDLTLSETRNESK
Mb2500|M.bovis_AF2122/97 MAPTSSSVASELLMPWPSAAASGVVGWRTTATASQRYHRPMSDTPFAEPY
Rv2473|M.tuberculosis_H37Rv MAPTSSSVASELLMPWPSAAASGVVGWRTTATASQRYHRPMSDTPFAEPY
. *.
Mvan_1268|M.vanbaalenii_PYR-1 STPE----------PHVSRVPQKVTRNS----SPLTPIALLVALIAVGLA
Mflv_5087|M.gilvum_PYR-GCK SSDD----------LKVSRTPQKVTRTT----SPLTPIALLISLVAIGLA
TH_3933|M.thermoresistible__bu PTAR----------HAVSRTPVQVRPVR----DWTARTALPIAVVAVGLA
Mb2500|M.bovis_AF2122/97 PEQRPPWGVPPPGWDGSSRPAPSTTPRSPGRWSLVAALALAVVSLGVGIV
Rv2473|M.tuberculosis_H37Rv PEQRPPWGVPPPGWDGSSRPAPSTTPRSPGRWSLVAALALAVVSLGVGIV
. ** . .. . : ** : :.:*:.
Mvan_1268|M.vanbaalenii_PYR-1 VWALLSMPEQQSASATG----APLQGDAKERVCSAAHTVAMAVQRQTNAN
Mflv_5087|M.gilvum_PYR-GCK VWALVSMPEPASVSATG----SPLSGNAKDRVCTAAHTVAMGVQRQTNAN
TH_3933|M.thermoresistible__bu GWALFDVR---SGTAD-----APSPPDSTARVCGAFQVVSTAIPLQTHLD
Mb2500|M.bovis_AF2122/97 GWFHRQPHDKPSPAPSAPTFTSQQISDAKENVCAAHRIVRQAAVLNTNQA
Rv2473|M.tuberculosis_H37Rv GWFHRQPHDKPSPAPSAPTFTSQQISDAKENVCAAHRIVRQAAVLNTNQA
* . * :. : ::. .** * : * . :*:
Mvan_1268|M.vanbaalenii_PYR-1 --IGPEPAAVEAVAANARLAMLGGGDYLLSQISSD--TPQDLADAARAFG
Mflv_5087|M.gilvum_PYR-GCK --IGPEPAAVEAVAANARLAMLGGGEYLLGQISPD--TPQELADAARDFA
TH_3933|M.thermoresistible__bu --LGEDPVAQTAVAGNARLALLGGGQYLLGTLDAG--TPEDLATAVRSFA
Mb2500|M.bovis_AF2122/97 NPVPGDPTGDLAVAANARLALYSGGDYLLRRLTAEPATPAELRDAVRSLA
Rv2473|M.tuberculosis_H37Rv NPVPGDPTGDLAVAANARLALYSGGDYLLRRLTAEPATPAELRDAVRSLA
: :*.. ***.*****: .**:*** : . ** :* *.* :.
Mvan_1268|M.vanbaalenii_PYR-1 TTLQQIGANALAGVPNDEDLQAGRIRDAEATRNKLSQLCSS
Mflv_5087|M.gilvum_PYR-GCK TTLQLIGTNALAGATQDDELQAGRMKEAEARRGDLSRICSR
TH_3933|M.thermoresistible__bu NSLQDIGIHALAGVPNTDPIQSGRMADSDAVRRQIVELCQ-
Mb2500|M.bovis_AF2122/97 NALQELAVNYLAGAP--DSVVTPLRLALERDTRAVDPLCV-
Rv2473|M.tuberculosis_H37Rv NALQELAVNYLAGAP--DSVVTPLRLALERDTRAVDPLCV-
.:** :. : ***.. : : : : : :*