For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTQDRCAVVGVGNTDYSFNSGRSTLTLAAQAGVAALNDAGLEPADIDGIVRCEMDEVLHADLAATLGMTN VNFWAAGSWAGAAPCGMVGLAVNAICSGQATNVLVFRSLNGRSGRRFGREWSSGQTVGGAGSYLEFLAPY GLQSPGMAYALFARKHMIDYGTTSEQLGHIAVTCHRRANQNPTAQRYGHPLTMAGYLESRMIADPLRRFD FCLETDGAAAVIVSSAERARDGAATPILIRAVVQGDEPVPRQGGLWGNLLTGPLTNASSALARRLYQTAG MGPDDIDVAQFYDCFTITVLMQLEDYGFCARGEGGPFAASGALELDGALPINTSGGNLADGYIHGLSHIV EGVRQLRGQSTANVPDARTCLVTSGMPGPGSSALILRTD
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0899 | - | - | 100% (389) | lipid-transfer protein |
| M. vanbaalenii PYR-1 | Mvan_5253 | - | 3e-76 | 40.57% (387) | lipid-transfer protein |
| M. vanbaalenii PYR-1 | Mvan_0529 | - | 3e-57 | 36.69% (387) | putative nonspecific lipid-transfer protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3570c | ltp2 | 9e-74 | 40.66% (391) | lipid-transfer protein |
| M. gilvum PYR-GCK | Mflv_1513 | - | 1e-74 | 40.57% (387) | lipid-transfer protein |
| M. tuberculosis H37Rv | Rv3540c | ltp2 | 9e-74 | 40.66% (391) | lipid-transfer protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0618 | - | 1e-75 | 40.73% (383) | lipid-transfer protein |
| M. marinum M | MMAR_5027 | ltp2_1 | 1e-75 | 41.27% (395) | acetyl-CoA acetyltransferase (PaaJ-like), Ltp2_1 |
| M. avium 104 | MAV_0621 | - | 5e-76 | 41.54% (390) | lipid-transfer protein |
| M. smegmatis MC2 155 | MSMEG_5990 | - | 5e-74 | 40.05% (382) | lipid-transfer protein |
| M. thermoresistible (build 8) | TH_2534 | - | 1e-121 | 56.38% (392) | PUTATIVE lipid-transfer protein |
| M. ulcerans Agy99 | MUL_4101 | ltp2_1 | 6e-75 | 41.01% (395) | lipid-transfer protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3570c|M.bovis_AF2122/97 --------------------MLSGQAAIVGIGATDFSKNSGRSELRLAAE
Rv3540c|M.tuberculosis_H37Rv --------------------MLSGQAAIVGIGATDFSKNSGRSELRLAAE
MMAR_5027|M.marinum_M --------------------MLSGKAAIVGIGATDFSKNSGRSELRLAAE
MUL_4101|M.ulcerans_Agy99 --------------------MLSGKAAIVGIGATDFSKNSGRSELRLAAE
MAV_0621|M.avium_104 --------------------MLSRKAAIVGIGATDFSKDSGRSELRLAAE
MAB_0618|M.abscessus_ATCC_1997 ------------------MTGLSGRSAIAGIGATDFSKKSGRSELRLAAE
MSMEG_5990|M.smegmatis_MC2_155 ------------------MTGLSGKAAIAGIGATDFSKNSGRSELRLAAE
Mflv_1513|M.gilvum_PYR-GCK --------------------MLSGKAAIAGIGATDFSKNSGRSELRLAAE
Mvan_0899|M.vanbaalenii_PYR-1 MT--------------------QDRCAVVGVGNTDYSFNSGRSTLTLAAQ
TH_2534|M.thermoresistible__bu MTPPVANGPAITHPASKDYAPHRDQCAIAGIGETAYTRNSGVSELGLAVA
:.*:.*:* * :: .** * * **.
Mb3570c|M.bovis_AF2122/97 AVLDALADAGLSPTDVDGLTTFTMDTNTEIAVARAAGIGELTFFSKIHYG
Rv3540c|M.tuberculosis_H37Rv AVLDALADAGLSPTDVDGLTTFTMDTNTEIAVARAAGIGELTFFSKIHYG
MMAR_5027|M.marinum_M AVRDALDDAGLSPADVDGLTTFTMDTNTEIAVARAAGIGELKFFSKIHYG
MUL_4101|M.ulcerans_Agy99 AVRDALDDAGLSPADVDGLTTFTMDTNTEIAVARAAGIGELKFFSKIHYG
MAV_0621|M.avium_104 AVLDALDDAGLSPADVDGLTTFTMDTNNETAVARAVGIGDLKFFSQIGYG
MAB_0618|M.abscessus_ATCC_1997 AVLDALDDAGLSPSDVDGLVTFTMDSNLETAVARATGIGELKFFSQIGYG
MSMEG_5990|M.smegmatis_MC2_155 CVLDALDDAGLEPSDVDGLVTFTMDSNQETAVARSTGIGELKFFSQIGYG
Mflv_1513|M.gilvum_PYR-GCK AVLDALDDAGLTTADVDGLVTFSMDSNLETAVARSTGIGELKFFSQIGYG
Mvan_0899|M.vanbaalenii_PYR-1 AGVAALNDAGLEPADIDGIVRCEMDEVLHADLAATLGMTNVNFWAAGSWA
TH_2534|M.thermoresistible__bu AARNALADAGLQPGDIDGLVRNDFDTVTHNDLATALGLEDVTYWGISGAG
. ** **** . *:**:. :* . :* : *: ::.::. .
Mb3570c|M.bovis_AF2122/97 GGAACATVQHAAMAVATGVADVVVAYRAFNERSGM-RFGQVQTRLT----
Rv3540c|M.tuberculosis_H37Rv GGAACATVQHAAMAVATGVADVVVAYRAFNERSGM-RFGQVQTRLT----
MMAR_5027|M.marinum_M GGAACATVQHAAMAVATGIADVVVAYRAFNERSGM-RFGQVQTRLT----
MUL_4101|M.ulcerans_Agy99 GGAACATVQHAAMAVATGIADVVVAYRAFNERSDM-RFGQVQTRLT----
MAV_0621|M.avium_104 GGAACATVQQAAIAVATGVADVVVAYRAFNERSGM-RFGQVQTRLAGDAR
MAB_0618|M.abscessus_ATCC_1997 GGAAAATVQQAALAVAAGVAEVVVAYRAFNERSEF-RFGQVMTGLS----
MSMEG_5990|M.smegmatis_MC2_155 GGAAAATVQQAALAVATGVAEVVVAYRAFNERSEF-RFGQVMTGLT----
Mflv_1513|M.gilvum_PYR-GCK GGAAAATVQQAALAVATGVAEVVVAYRAFNERSEH-RFGQVMTGLT----
Mvan_0899|M.vanbaalenii_PYR-1 GAAPCGMVGLAVNAICSGQATNVLVFRSLNGRSGR-RFG---REWSSG--
TH_2534|M.thermoresistible__bu GAVAPGQIAQAVAAIESGQATTVLVYRALNGRSGADRYGQTRRNLGGP--
*... . : *. *: :* * *:.:*::* ** *:*
Mb3570c|M.bovis_AF2122/97 ENADSTGVDNSFSYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAVSVAD
Rv3540c|M.tuberculosis_H37Rv ENADSTGVDNSFSYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAVSVAD
MMAR_5027|M.marinum_M ENADSTGVDNSFSYPHGLSTPAAQVAMIAKRYMHLSGASSRDFGAVSVAD
MUL_4101|M.ulcerans_Agy99 ENADSTGVDNSFSYPHGLSTPAAQVAMIAKRYMHLSGASSRDFGAVSVAD
MAV_0621|M.avium_104 AQADSTAADNSFSYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAISVAD
MAB_0618|M.abscessus_ATCC_1997 STADSRGVEYSWSYPHGLSTPAASVAMIARRYMHEYGATSADFGAVSVAD
MSMEG_5990|M.smegmatis_MC2_155 TNADSRGVEYSWSYPHGLSTPAASVAMIARRYMHEYGATSADFGVVSVAD
Mflv_1513|M.gilvum_PYR-GCK VNADSRGVEYSWSYPHGLSTPAASVAMIAQRYMHEFGATSADFGVISVAD
Mvan_0899|M.vanbaalenii_PYR-1 QTVGGAGSYLEFLAPYGLQSPGMAYALFARKHMIDYGTTSEQLGHIAVTC
TH_2534|M.thermoresistible__bu ATVGGNGSYDEYFLPYGLAAAGQLYAMVAQRHMIDYGTTSEQLGVIATTV
... . .: *:** :.. *:.*:::* *::* ::* ::.:
Mb3570c|M.bovis_AF2122/97 RKHAANNPKAYFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVT
Rv3540c|M.tuberculosis_H37Rv RKHAANNPKAYFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVT
MMAR_5027|M.marinum_M RKHAAKNPKAYFYQKPITIDDHQNSRWIAEPLRLLDCCQETDGAVAIVVT
MUL_4101|M.ulcerans_Agy99 RKHAAKNPKAYFYQKPITIDDHQNSRWIAEPLRLLDCCQETDGAVAIVVT
MAV_0621|M.avium_104 RKHAAKNPKAYFYEKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVT
MAB_0618|M.abscessus_ATCC_1997 RKHAATNPKAFFYGKPITIEDHQNSRMIADPVRLLDCCQESDGGVAIVVT
MSMEG_5990|M.smegmatis_MC2_155 RKHAANNPKAHFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVT
Mflv_1513|M.gilvum_PYR-GCK RKHAANNPKAHFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVT
Mvan_0899|M.vanbaalenii_PYR-1 HRRANQNPTAQRYGHPLTMAGYLESRMIADPLRRFDFCLETDGAAAVIVS
TH_2534|M.thermoresistible__bu RKRANANPRAQMHDRTMTLEDHQNSRPISEPLRLFDYCLETDGACAVIVT
:::* ** * : :.:*: .: :** *::*:* :* * *:**. *::*:
Mb3570c|M.bovis_AF2122/97 SAARARDLKQRPVVIEAAAQGCSPDQ---YTMVSYYRPELDGLPEMGLVG
Rv3540c|M.tuberculosis_H37Rv SAARARDLKQRPVVIEAAAQGCSPDQ---YTMVSYYRPELDGLPEMGLVG
MMAR_5027|M.marinum_M SAERARDLQQRPAIIEAASQGSSPDQ---YTMVSYYRPELDGLPEMGLVG
MUL_4101|M.ulcerans_Agy99 SAERARDLQQRPAIIEAASQGSSPDQ---YTMVSYYRPELDGLPEMGLVG
MAV_0621|M.avium_104 SVERARDLKQRPAVIEAAAQGSSPDQ---YTMVSYYRSELG-LPEMGVVG
MAB_0618|M.abscessus_ATCC_1997 TPERAKDLKNRPVIIEAAAQGSGEDQ---FTMYSYYRDELG-LPEMGLVG
MSMEG_5990|M.smegmatis_MC2_155 TPERAKDLKHRPVTIEAAAQGSGADQ---FTMYSYYRDELG-LPEMGLVG
Mflv_1513|M.gilvum_PYR-GCK TPERARDLKHRPAIIEAAAQGAGADQ---FTMYSYYREELG-LPEMGLVG
Mvan_0899|M.vanbaalenii_PYR-1 SAERARDGAATPILIRAVVQGDEPVPRQGGLWGNLLTGPLTNASS--ALA
TH_2534|M.thermoresistible__bu STERARDCRPAPVLIRAVAMATGPDPKGGVVFPTLFRDDYTTFPSK-RAA
: **:* * *.*. . . .. .
Mb3570c|M.bovis_AF2122/97 RQLWAQSGLTPADVQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGA
Rv3540c|M.tuberculosis_H37Rv RQLWAQSGLTPADVQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGA
MMAR_5027|M.marinum_M QQLWQQSGLKPTDIQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGA
MUL_4101|M.ulcerans_Agy99 QQLWQQSGLKPTDIQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGA
MAV_0621|M.avium_104 RQLWQQSGLKPTDIQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGA
MAB_0618|M.abscessus_ATCC_1997 RQLWDQSGLTPNDIQTAILYDHFTPYTLLQLEELGFCGKGEAKDFIANGA
MSMEG_5990|M.smegmatis_MC2_155 RQLWQQSGLTPDDIQTAILYDHFTPYTLLQLEELGFCGKGEAKDFIAGGA
Mflv_1513|M.gilvum_PYR-GCK RQLWAQSGLTPQDIQTAVLYDHFTPYTLIQLEELGFCGKGEAKDFIAGGA
Mvan_0899|M.vanbaalenii_PYR-1 RRLYQTAGMGPDDIDVAQFYDCFTITVLMQLEDYGFCARGEGGPFAASGA
TH_2534|M.thermoresistible__bu QTLYRRAGLGPSDIDVAQIYDCFTITTLIQVEDYGFCSKGEGGPFVESGA
: *: :*: * *::.* :** ** .*:*:*: ***.:**. * .**
Mb3570c|M.bovis_AF2122/97 IEVGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNPVAGVEHVLV
Rv3540c|M.tuberculosis_H37Rv IEVGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNPVAGVEHVLV
MMAR_5027|M.marinum_M IELGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNPVPDVEHVLV
MUL_4101|M.ulcerans_Agy99 IELGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNPVPDVEHVLV
MAV_0621|M.avium_104 IEIGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNPVPDVEHVLV
MAB_0618|M.abscessus_ATCC_1997 IELGGKLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNQVPNVEHVLV
MSMEG_5990|M.smegmatis_MC2_155 IEIGGKLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNQVEGVEHVLV
Mflv_1513|M.gilvum_PYR-GCK IEIGGRLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNQVPDVEHVLV
Mvan_0899|M.vanbaalenii_PYR-1 LELDGALPINTSGGNLADGYIHGLSHIVEGVRQLRGQSTANVPDARTCLV
TH_2534|M.thermoresistible__bu IDLDGTIPVNTSGGHLSEGYIHGMNHVLEGVRQLRGESTGQVRDAATCLV
:::.* :*:** **:*.:.****:. : ******** *. * .. **
Mb3570c|M.bovis_AF2122/97 TAGTGVP-TSGLILG---
Rv3540c|M.tuberculosis_H37Rv TAGTGVP-TSGLILG---
MMAR_5027|M.marinum_M TAGTGVP-TSGLILG---
MUL_4101|M.ulcerans_Agy99 TAGTGVP-TSGLILG---
MAV_0621|M.avium_104 TAGTGVP-TSGLILG---
MAB_0618|M.abscessus_ATCC_1997 TAGTGVP-TSGLILG---
MSMEG_5990|M.smegmatis_MC2_155 TAGTGVP-TSGLILG---
Mflv_1513|M.gilvum_PYR-GCK TAGTGVP-TSGLILG---
Mvan_0899|M.vanbaalenii_PYR-1 TSGMPGPGSSALILRTD-
TH_2534|M.thermoresistible__bu TGGSPAP-TSALILRRDQ
*.* * :*.***