For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AKTFVGARIRQLRSERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDATFFASQDDTR LIAELREVLMDRDLDVDVDPAEVADMVGSHPALARAMVNLHRRYQLTTTQLAAATEDRFNVGSGGGSGAI TMPHEEVRDYFYQRQNYLHDLDTAAEALTADMRVHRGDLAGDLSDRLRFVHGVTVIRSVDLGEGVLHRYD PATRRLEVGAHLSSGQTVFRMAAELAYLECGELIDKLVDEGKFTSEESRKLARMGLANYFAAAAVLPYGQ FHEVAEKFRYDIERLSAYYSVSYETTCHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGG TCPLWNVYETFANPGKISVQIAEMPDGRAYMWVARTVERRASRYGQPGKTFAIGLGCELRHAQRLVYSEG LVTGDPNVPATPIGAGCRVCERDNCPQRAFPALGRALDIDEHRSTVSPYLVRQQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0799 | - | - | 100% (475) | hypothetical protein Mvan_0799 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0474c | - | 0.0 | 81.68% (475) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_0109 | - | 0.0 | 90.02% (481) | hypothetical protein Mflv_0109 |
M. tuberculosis H37Rv | Rv0465c | - | 0.0 | 81.89% (475) | transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4118 | - | 0.0 | 81.68% (475) | transcriptional regulatory protein |
M. marinum M | MMAR_0790 | - | 0.0 | 82.32% (475) | transcriptional regulatory protein |
M. avium 104 | MAV_4684 | - | 0.0 | 83.16% (475) | DNA-binding protein |
M. smegmatis MC2 155 | MSMEG_0906 | - | 0.0 | 82.95% (475) | DNA-binding protein |
M. thermoresistible (build 8) | TH_4348 | - | 0.0 | 80.25% (476) | PUTATIVE protein of unknown function DUF955 |
M. ulcerans Agy99 | MUL_4534 | - | 0.0 | 82.32% (475) | transcriptional regulatory protein |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0906|M.smegmatis_MC2_155 MPKTFVGSRVRQLRSERGFSQAALAQMLDISPSYLNQIEHDVRPLTVAVL TH_4348|M.thermoresistible__bu VAKTYVGSRVRQLRNERGYSQAALAEMLGISPSYLNQIEHDVRPLTVPVL Mb0474c|M.bovis_AF2122/97 MSKTYVGSRVRQLRNERGFSQAALAQMLEISPSYLDQIEHDVRPLTVAVL Rv0465c|M.tuberculosis_H37Rv MSKTYVGSRVRQLRNERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVL MMAR_0790|M.marinum_M MSKTFVGSRVRQLRNERGFSQAALAQLLEISPSYLNQIEHDVRPLTVAVL MUL_4534|M.ulcerans_Agy99 MSKTFVGSRVRQLRNERGFSQAALAQLLEISPSYLNQIEHDVRPLTVAVL MAV_4684|M.avium_104 MSKTFVGSRVRQLRHERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVL MAB_4118|M.abscessus_ATCC_1997 MSKTYVGGRLRQLRSERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVL Mvan_0799|M.vanbaalenii_PYR-1 MAKTFVGARIRQLRSERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVL Mflv_0109|M.gilvum_PYR-GCK MAKTFVGARVRQLRSERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVL :.**:**.*:**** ***:******::* ******:***********.** MSMEG_0906|M.smegmatis_MC2_155 LRITEVFGVDATFFSPQDDTRLVAELREVTLDRDLGASDVDLTEVADMVA TH_4348|M.thermoresistible__bu LRITDLFGVDATFFAPEDNTRLIAELREVTLDRDLDIN-VDMTEIADMVS Mb0474c|M.bovis_AF2122/97 LRITEVFGVDATFFASQDDTRLVAELREVTLDRDLDIA-IDPHEVAEMVS Rv0465c|M.tuberculosis_H37Rv LRITEVFGVDATFFASQDDTRLVAELREVTLDRDLDIA-IDPHEVAEMVS MMAR_0790|M.marinum_M LRITEVFGVDATFFSSQDDTRLVAELREVTMDRDLDIS-VDPTEVAEMVS MUL_4534|M.ulcerans_Agy99 LRITEVFGVDATFFSSQDDTRLVAELREVTMDRDLDIS-VDPTEVAEMVS MAV_4684|M.avium_104 LRITEVFGVDATFFSSQDDTRLVAELREVTMDRDLDID-VDPTEVAEMVS MAB_4118|M.abscessus_ATCC_1997 LRITEVFGVDATFFSSQDDSRLIAELREVVQDKDLDID-VDPAEIADVVA Mvan_0799|M.vanbaalenii_PYR-1 LRITEVFGVDATFFASQDDTRLIAELREVLMDRDLDVD-VDPAEVADMVG Mflv_0109|M.gilvum_PYR-GCK LRITEVFGVDATFFASQDDTRLIAELREVTMDRDLDVE-VDPAEIAEVVA ****::********:.:*::**:****** *:**. :* *:*::*. MSMEG_0906|M.smegmatis_MC2_155 SHPKLARAMVNLHRRYRLATTQLAAATEDRYSD--------GSGSGAITM TH_4348|M.thermoresistible__bu AHPELARAMVNLHQRYRRTTTQLAAATEDRYHDS----SGFGSGSGSITM Mb0474c|M.bovis_AF2122/97 AHPGLARAVVNLHRRYRITTAQLAAATEERFSD--------GSGRGSITM Rv0465c|M.tuberculosis_H37Rv AHPGLACAVVNLHRRYRITTAQLAAATEERFSD--------GSGRGSITM MMAR_0790|M.marinum_M AHPSLARAMVNLHRRYRITTAQLAAATEERYSD--------GSGTGSITM MUL_4534|M.ulcerans_Agy99 AHPSLARAMVNLHRRYRITTAQLAAATEERYSD--------GSGTGSITM MAV_4684|M.avium_104 AHPGLARAVVNLHRRYRITTAQLAAATEERFFD--------GSGTGSITM MAB_4118|M.abscessus_ATCC_1997 GHPALARAMVNLHRRYRITTTQLAAATEDRYTD--------GSGSGSITM Mvan_0799|M.vanbaalenii_PYR-1 SHPALARAMVNLHRRYQLTTTQLAAATEDRFN------VGSGGGSGAITM Mflv_0109|M.gilvum_PYR-GCK SHPSLARAMVNLHRRYQLTTTQLAAATEDRFNTAGLSSAGGGSGSGAISM .** ** *:****:**: :*:*******:*: *.* *:*:* MSMEG_0906|M.smegmatis_MC2_155 PHEEVRDYFYERQNYLHELDTAAEDLTARMRMHSGDLAAELTNRLTSVHG TH_4348|M.thermoresistible__bu PHEEVRDYFYQRQNYLHELDTAAEDLTIRMGMTRTELARQLADRLTMVHG Mb0474c|M.bovis_AF2122/97 PHEEVRDYFYQRQNYLHALDTAAEDLTAQMRMHHGDLARELTRRLTEVHG Rv0465c|M.tuberculosis_H37Rv PHEEVRDYFYQRQNYLHALDTAAEDLTAQMRMHHGDLARELTRRLTEVHG MMAR_0790|M.marinum_M PHEEVRDYFYQRQNYLHELDAAAEDLTIQMRLHHGDLRSELTRRLTEVHG MUL_4534|M.ulcerans_Agy99 PHEEVRDYFYQRQNYLHELDAAAEDLTIQMRLHHGDLRSELTRRLTEVHG MAV_4684|M.avium_104 PHEEVRDYFYQRQNYLHELDTAAEDLTIKMRLHHGDLARELTRRLTEVHG MAB_4118|M.abscessus_ATCC_1997 PHEEVRDYFYQRHNYLHELDTAAEDLTVRMRMHRADLAREIADRLTEVHG Mvan_0799|M.vanbaalenii_PYR-1 PHEEVRDYFYQRQNYLHDLDTAAEALTADMRVHRGDLAGDLSDRLRFVHG Mflv_0109|M.gilvum_PYR-GCK PHEEVRDYFYQRQNYLHELDLAAENLTADMRVHRGELAGDLADRLRFVHG **********:*:**** ** *** ** * : :* ::: ** *** MSMEG_0906|M.smegmatis_MC2_155 VRVVRRIDMGETVLHRYDPATKTLEMSNHISRGQQVFKMAAELAYLEFGD TH_4348|M.thermoresistible__bu VHIVRRVDMPETVLHRYDPETRTLELNNQLSSGQQVFKMAAELGYLEFGD Mb0474c|M.bovis_AF2122/97 VRINKRIDLGDTVLHRYDPATNTLEISSHLSPGQQVFKMAAELAYLEFGD Rv0465c|M.tuberculosis_H37Rv VRINKRIDLGDTVLHRYDPATNTLEISSHLSPGQQVFKMAAELAYLEFGD MMAR_0790|M.marinum_M VRITRRIDLGDTVLHRFDPATKTLEISNHLASGQQVFKMAAELAYLEFGD MUL_4534|M.ulcerans_Agy99 VRITRRIDLGDTVLHRLDPATMTLEISNHLASGQQVFKMAAELAYLEFGD MAV_4684|M.avium_104 VHINRRIDLGDTVLHRYDPETKTLEISNHLSWGQQVFKMAAELAYLEFGD MAB_4118|M.abscessus_ATCC_1997 VQIARRIDLGDSVLHKYDPASKTLEISNHLSGGQQVFKLAAELAYLEYGD Mvan_0799|M.vanbaalenii_PYR-1 VTVIRSVDLGEGVLHRYDPATRRLEVGAHLSSGQTVFRMAAELAYLECGE Mflv_0109|M.gilvum_PYR-GCK VTIIRRIDLGEVVMHRYDPDTRRLEMSAQLSAGQRVFRMAAELAYLECGD * : : :*: : *:*: ** : **:. ::: ** **::****.*** *: MSMEG_0906|M.smegmatis_MC2_155 LIDKLVDEGRFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDI TH_4348|M.thermoresistible__bu LIDKLVDEGHFTSDESRKLARLGLANYFAAATVLPYRQFHGVTENFRYDI Mb0474c|M.bovis_AF2122/97 LIDAMVTDGKFTSAESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDV Rv0465c|M.tuberculosis_H37Rv LIDAMVTDGKFTSAESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDV MMAR_0790|M.marinum_M LIDAMVTDGKFTSDESRTLARLGLANYFAAAAVLPYRQFHDVAENFRYDV MUL_4534|M.ulcerans_Agy99 LIDAMVTDGKFTSDESRTLARLGLANYFAAAAVLPYRQFHDVAENFRYDV MAV_4684|M.avium_104 LIDSLVAQGKFTSEESHKLARLGLANYFAAAAVLPYRQFHDVAENFRYDV MAB_4118|M.abscessus_ATCC_1997 LIDTMVDDGKFTSEESRKLARLGLANYFAAATVLPYRQFHGVAEDFQYDI Mvan_0799|M.vanbaalenii_PYR-1 LIDKLVDEGKFTSEESRKLARMGLANYFAAAAVLPYGQFHEVAEKFRYDI Mflv_0109|M.gilvum_PYR-GCK LIEKLVAEGHFTSEESRKLARMGLANYFAAATVLPYGQFHEVAEKFRYDV **: :* :*:*** **:.***:*********:**** *** *:*.*:**: MSMEG_0906|M.smegmatis_MC2_155 ERLSAFYQVSYETIGHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATG TH_4348|M.thermoresistible__bu ERLSAFYRVSYETICHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSASG Mb0474c|M.bovis_AF2122/97 ERLSAFYSVSYETIAHRLSTLQRPSMRGVPFTFVQVDRAGNMSKRQSATG Rv0465c|M.tuberculosis_H37Rv ERLSAFYSVSYETIAHRLSTLQRPSMRGVPFTFVRVDRAGNMSKRQSATG MMAR_0790|M.marinum_M ERLSAFYSVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATG MUL_4534|M.ulcerans_Agy99 ERLSAFYSVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATG MAV_4684|M.avium_104 ERLSSFYSVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATG MAB_4118|M.abscessus_ATCC_1997 ERLSAFYSVSYETVCHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATG Mvan_0799|M.vanbaalenii_PYR-1 ERLSAYYSVSYETTCHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATG Mflv_0109|M.gilvum_PYR-GCK ERLSAYYSVSYETICHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATG ****::* ***** ****************:*::*************:* MSMEG_0906|M.smegmatis_MC2_155 FHFSSSGGTCPLWNVYETFAYPGKILVQIAQMPDGRHYMWVARTVERRAH TH_4348|M.thermoresistible__bu FHFSSSGGTCPLWNVYETFAYPGKIMVQIAEMPDGRKYLWVARTVERRAS Mb0474c|M.bovis_AF2122/97 FHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYLWVARTVELRAA Rv0465c|M.tuberculosis_H37Rv FHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYLWVARTVELRAA MMAR_0790|M.marinum_M FHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYMWVARTVERRAA MUL_4534|M.ulcerans_Agy99 FHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYMWVARTVERRAA MAV_4684|M.avium_104 FHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYMWVARTVERRAA MAB_4118|M.abscessus_ATCC_1997 FHFSSSGGTCPLWNVYETFGNPGKILVQVAQMPDGRNYLWVARTVERRAS Mvan_0799|M.vanbaalenii_PYR-1 FHFSSSGGTCPLWNVYETFANPGKISVQIAEMPDGRAYMWVARTVERRAS Mflv_0109|M.gilvum_PYR-GCK FHFSSSGGTCPLWNVYETFANPGKIGVQIAEMPDGRAYMWVARTVERRAA *******************. **** **:*:***** *:******* ** MSMEG_0906|M.smegmatis_MC2_155 RYGQPGKTFAIGLGCELRHAHRLVYSEGLDLSGNV---STPIGAGCRVCE TH_4348|M.thermoresistible__bu RYGQPGKTFAIGLGCELRHAHRLVYSEGLDLSGEN---ASPIGVGCRVCE Mb0474c|M.bovis_AF2122/97 RYGQPGKTFAIGLGCELRHAHRLVYSEGLDLSGDPNTAATPIGAGCRVCE Rv0465c|M.tuberculosis_H37Rv RYGQPGKTFAIGLGCELRHAHRLVYSEGLDLSGDPNTAATPIGAGCRVCE MMAR_0790|M.marinum_M RYGQPGKTFAIGLGCELRHAHRLVYSEGLDLSGDPNIAATPIGAGCRVCE MUL_4534|M.ulcerans_Agy99 RYGQPGKTFAIGLGCELRHAHRLVYSEGLDLSGDPNIAATPIGAGCRVCE MAV_4684|M.avium_104 RYGQPGKTFAIGLGCELRHAHRLVYSEGLDVSGGPGTVATPIGAGCRVCE MAB_4118|M.abscessus_ATCC_1997 RYGQPGKTFAIGLGCELRHAHRLVYSQGLDLSSEG--ATTPIGVGCRVCE Mvan_0799|M.vanbaalenii_PYR-1 RYGQPGKTFAIGLGCELRHAQRLVYSEGL-VTGDPNVPATPIGAGCRVCE Mflv_0109|M.gilvum_PYR-GCK RYGQPGKTFAIGLGCELRHAQRLVYSEGLDLSGDPSVRATPIGAGCRVCE ********************:*****:** ::. ::***.****** MSMEG_0906|M.smegmatis_MC2_155 RDNCPQRAFPALGKALDLDEHRSTVSPYLVRPSEVKPLG TH_4348|M.thermoresistible__bu RDNCPQRAFPALGRALDLDEHRSTVSPYLVR----RP-- Mb0474c|M.bovis_AF2122/97 RDNCPQRAFPALGRALDLDEHRSTVSPYLVKQL------ Rv0465c|M.tuberculosis_H37Rv RDNCPQRAFPALGRALDLDEHRSTVSPYLVKQL------ MMAR_0790|M.marinum_M RDNCPQRAFPALGRALDLDEHRSTVSPYLVKQP------ MUL_4534|M.ulcerans_Agy99 RDNCPQRAFPALGRALDLDEHRSTVSPYLVKQP------ MAV_4684|M.avium_104 RDNCPQRAFPALGRALDLDEHRSTVSPYLVKQP------ MAB_4118|M.abscessus_ATCC_1997 RDNCPQRAFPALGRALDLDEHRSTVSPYLVLQEGAHP-- Mvan_0799|M.vanbaalenii_PYR-1 RDNCPQRAFPALGRALDIDEHRSTVSPYLVRQQ------ Mflv_0109|M.gilvum_PYR-GCK RDNCPQRAFPALGRALDIDEHRSTVSPYLVRQP------ *************:***:************