For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LIRKANIRRSVRVEVAASRPHTLRGKPMKHVVTVAASVIAATFAPATAGATPPEGDVERTELGQGTTNAP VVIVSVGQPTTLYVQELELNGPAGSGWHTHPGPEHTVITEGTVHVQSAPDCVPVAYPAGQSVFIPAGVPH TVRNEGPGDAHAVVTYTLPADRAVRDDAPAACP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0588 | - | - | 100% (173) | cupin 2 domain-containing protein |
M. vanbaalenii PYR-1 | Mvan_5112 | - | 1e-07 | 31.29% (147) | cupin 2 domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2547c | - | 6e-05 | 32.31% (65) | hypothetical protein MAB_2547c |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0644 | - | 2e-47 | 56.79% (162) | cupin domain-containing protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_0588|M.vanbaalenii_PYR-1 ---MIRKANIRRSVR-VEVAASRP----------HTLRGKPMKHVVTVAA MSMEG_0644|M.smegmatis_MC2_155 MRNICRPGPLPGPRRSPQPAALRPSAELYGFRQDLDARRSHMKPTHLVAA MAB_2547c|M.abscessus_ATCC_199 -------------------------------------------------- Mvan_0588|M.vanbaalenii_PYR-1 SVIAATFA---PATAGATPPEGDVERTELGQGTTNAPVVIVSVGQPTTLY MSMEG_0644|M.smegmatis_MC2_155 SVISVVMSGFFAAPAVATPAEGDVERTDLAEGTTTTPIWIVTAGQPTTLT MAB_2547c|M.abscessus_ATCC_199 -----------------------MNRHDLQRHDLSTP------GRET--L ::* :* . .:* *: * Mvan_0588|M.vanbaalenii_PYR-1 VQELELNGPAGSGWHTHPGPEHTVITEGTVHVQSAPDCVPVAYPAGQSVF MSMEG_0644|M.smegmatis_MC2_155 VQSLLLQPGAGSGWHAHPGPEHSVVNSGSVVLRTAPGCAPVTYGTGQSVF MAB_2547c|M.abscessus_ATCC_199 QTRVDFQPGAQAARHKHPGEEIIYVLKGTLIYDID-GQGSKTVTAGDVLF : :: * :. * *** * : .*:: . . : :*: :* Mvan_0588|M.vanbaalenii_PYR-1 IPAGVPHTVRNEGPGDAHAVVTYTLPADRAVRDDAPAACP MSMEG_0644|M.smegmatis_MC2_155 IPAGVPHEVSNQGSEEAEVVVTYTLPANVPARDDAPAMCP MAB_2547c|M.abscessus_ATCC_199 VPAETFHSVRNVGDGEGSELATYVVDKDKPLLVLAT---- :** . * * * * :. :.**.: : . *.