For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SDHGRMHIPESGLATPAAAHSDDPPHPHFNRRVTSFRARRSTISDAQQATWDRLWPELGRQVRDGDAPAG RLDTTPAGRLDTEAWFGRHAPVVLEIGCGTGTSTLAMAQAEPDIDVVAVEVYRRGLAQLLSAMDREGVTN IRLIRGDGVDVLTHMFGPDSLTGVRVFFPDPWPKARHHKRRLLQPDTVALIADRLRPGGILHAATDHMGY AGHIAEVGDAEPRLRRIDPDDAGLPISTARPVTKYQRKALAGTEVAELLWEKTTP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0198 | trmB | - | 100% (266) | tRNA (guanine-N(7))-methyltransferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0214c | trmB | 2e-84 | 62.55% (267) | tRNA (guanine-N(7)-)-methyltransferase |
M. gilvum PYR-GCK | Mflv_0454 | trmB | 1e-118 | 78.52% (270) | tRNA (guanine-N(7))-methyltransferase |
M. tuberculosis H37Rv | Rv0208c | trmB | 2e-84 | 62.55% (267) | tRNA (guanine-N(7)-)-methyltransferase |
M. leprae Br4923 | MLBr_02622 | trmB | 2e-76 | 63.04% (230) | tRNA (guanine-N(7)-)-methyltransferase |
M. abscessus ATCC 19977 | MAB_4506 | - | 4e-82 | 60.73% (247) | tRNA (guanine-N(7)-)-methyltransferase |
M. marinum M | MMAR_0448 | trmB | 4e-85 | 65.52% (232) | S-adenosylmethionine-dependentmethyltransferase |
M. avium 104 | MAV_4966 | trmB | 2e-88 | 63.12% (263) | tRNA (guanine-N(7))-methyltransferase |
M. smegmatis MC2 155 | MSMEG_0252 | trmB | 1e-101 | 75.82% (244) | tRNA (guanine-N(7))-methyltransferase |
M. thermoresistible (build 8) | TH_0722 | - | 1e-91 | 72.29% (231) | HYPOTHETICAL METHLYTRANSFERASE (METHYLASE) |
M. ulcerans Agy99 | MUL_1098 | trmB | 4e-84 | 64.66% (232) | tRNA (guanine-N(7)-)-methyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_0198|M.vanbaalenii_PYR-1 ------------------------MSDHGRMHIPESGLATPAAAHSDDP- Mflv_0454|M.gilvum_PYR-GCK ------------------------MSDHGRMHSTGSEVAAPVAPDPDTEG MSMEG_0252|M.smegmatis_MC2_155 ------------------------------MNAS----AGPPA------- MMAR_0448|M.marinum_M MPAATTRRQLLGINLDQERLRPGFMRHDGPMHVQPGVGLQSDTSSSTGTG MUL_1098|M.ulcerans_Agy99 ------------------------MRHDGPMHVQPGVGLQSDTSSSTGTG Mb0214c|M.bovis_AF2122/97 ------------------------MVHHGQMHAQPGVGLRPDTPVAS--- Rv0208c|M.tuberculosis_H37Rv ------------------------MVHHGQMHAQPGVGLRPDTPVAS--- MLBr_02622|M.leprae_Br4923 -------------------------------------------------- MAV_4966|M.avium_104 ------------------------MGHHGQMHAQHGVTMPADSPTGQ--- TH_0722|M.thermoresistible__bu -------------------------------------------------- MAB_4506|M.abscessus_ATCC_1997 ------------------------MRCDGQERGCAEAGSATDELPGTVGA Mvan_0198|M.vanbaalenii_PYR-1 ----------PHPHFNRRVTSFRARRSTISDAQQATWDRLWPELGRQVRD Mflv_0454|M.gilvum_PYR-GCK ----------VHPHFNRRVTSFRARRSTISDGQQATWDRLWPQLGRQARD MSMEG_0252|M.smegmatis_MC2_155 -----------EPHRLPRVTSFRTRRSTLSGGQQGTWDRLWPKLGMQARD MMAR_0448|M.marinum_M SGPADEPEAEKSAWGYLPPTAFRSRHSALSSIQQQTWERLWPQLGRQATA MUL_1098|M.ulcerans_Agy99 SGPADEPEAEKSAWGYLPPTAFRSRHSALSSIQQQTWERRWPQLGRQATA Mb0214c|M.bovis_AF2122/97 --------------GQLPSTSIRSRRSGISKAQRETWERLWPELGLLALP Rv0208c|M.tuberculosis_H37Rv --------------GQLPSTSIRSRRSGISKAQRETWERLWPELGLLALP MLBr_02622|M.leprae_Br4923 ------------MARHLPATAFRKRRSALSHAQRQTWERLWPEIGIS--- MAV_4966|M.avium_104 --------PDRSEQRYFPATAFRTRRSTLSDAQRQTWDRRWPELGLSVGP TH_0722|M.thermoresistible__bu ------------------VTSFRTRRTTLSRGQQETWERLWPVLGRQARD MAB_4506|M.abscessus_ATCC_1997 ASSG---RTDSQNHHPRRVSSFRSRGSSLSEGQQKAWDRSWPTYGRLARE :::* * : :* *: :*:* ** * Mvan_0198|M.vanbaalenii_PYR-1 GDAPAGRLDTTPAGRLDTEAWFGRHAPVVLEIGCGTGTSTLAMAQAEPDI Mflv_0454|M.gilvum_PYR-GCK GDEPP--------GPLDTDAWFGRHAPVVLEIGCGTGTSTLAMAQAEPGI MSMEG_0252|M.smegmatis_MC2_155 EDSQP-------ITDLDTEAWFGRSAPLVLEIGSGTGTSTLEMAKAEPHI MMAR_0448|M.marinum_M HSQPSARGHE-PIDPIDARAWFGREAPVVLEIGCGSGTSTLAMAQAEPNV MUL_1098|M.ulcerans_Agy99 HSQPSARGHE-PIDPIDARAWFGREAPVVLEIGCGSGTSTLAMAQAEPNV Mb0214c|M.bovis_AF2122/97 QS---PRG-----TPVDTRAWFGRDAPVVLEIGSGSGTSTLAMAKAEPHV Rv0208c|M.tuberculosis_H37Rv QS---PRG-----TPVDTRAWFGRDAPVVLEIGSGSGTSTLAMAKAEPHV MLBr_02622|M.leprae_Br4923 AVSQTRSA-----ERLDTGAWFGRSTLVVLEVGCGSGTATLAMAQHEPDI MAV_4966|M.avium_104 AEDPDRPG-----PPLDTDAWFGRKAPVVLEIGCGNGTSTLAMAKQEPGV TH_0722|M.thermoresistible__bu ADGRPAPR-------LDLEEWFGRSAPVVLEIGCGSGVSTLAMAQQEPHL MAB_4506|M.abscessus_ATCC_1997 ADGSCP--------PLDPATWFGRTAPLILEIGCGTGTSTAAMALQEPDF :* **** : ::**:*.*.*.:* ** ** . Mvan_0198|M.vanbaalenii_PYR-1 DVVAVEVYRRGLAQLLSAMDR-----EGVTNIRLIRGDGVDVLTHMFGPD Mflv_0454|M.gilvum_PYR-GCK DVVAVEVYRRGLAQLLSAIDRTAATEHPVSNIRLIRGDGVDVLTHMFGSA MSMEG_0252|M.smegmatis_MC2_155 DVIAVEVYRKGLAQLLSAIDR-----EGVTNIRMIRGDGVDVLEHMIGSN MMAR_0448|M.marinum_M DVIAVEVYRRGLAQLLCAIDRA---DLQRINIRLIRGNGIDVLRDLIAPE MUL_1098|M.ulcerans_Agy99 DVIAVEVYRRGLAQLLCAIDRA---DLQRINIRLIRGNGIDVLRDLIAPE Mb0214c|M.bovis_AF2122/97 DVIAVDVYRRGLAQLLCAIDKV---GSDGINIRLILGNAVDVLQHLIAPD Rv0208c|M.tuberculosis_H37Rv DVIAVDVYRRGLAQLLCAIDKV---GSDGINIRLILGNAVDVLQHLIAPD MLBr_02622|M.leprae_Br4923 DVIAVEVYRRGLAQLLCAIDRD---QVH--NIRMIHGNALYVLQYLIAPR MAV_4966|M.avium_104 DVIAVEVYRRGLAQLLCAIDRD---NVT--NIRLIRGNALDVLQRLIAPA TH_0722|M.thermoresistible__bu DFIAVEVYKRGLAQLLSAIDRA-----GVSNIRLIRGDGVDVLEHLLGPE MAB_4506|M.abscessus_ATCC_1997 DVLAVEVYRKGLAQLLSAIDRE-----GIENIRLIRGDALDVLEHLLPSG *.:**:**::******.*:*: ***:* *:.: ** :: . Mvan_0198|M.vanbaalenii_PYR-1 SLTGVRVFFPDPWPKARHHKRRLLQPDTVALIADRLRPGGILHAATDHMG Mflv_0454|M.gilvum_PYR-GCK SLTGVRVFFPDPWPKARHHKRRLLQPDTMALIADRLRPGGVLHAATDHQG MSMEG_0252|M.smegmatis_MC2_155 TLTGVRVFFPDPWPKARHHKRRLLQPATVALIADRLREGGVLHAATDHMG MMAR_0448|M.marinum_M SLTGVRVFFPDPWPKARHHKRRLIQPSTVALIADRLLPGGVFHAATDHPG MUL_1098|M.ulcerans_Agy99 SLTGVRVFFPDPWPKARHHKRRLIQPSTVVLIADRLLPGGVFHAATDHPG Mb0214c|M.bovis_AF2122/97 SLCGVRVFFPDPWPKARHHKRRLLQPATMALIADRLVPSGVLHAATDHPG Rv0208c|M.tuberculosis_H37Rv SLCGVRVFFPDPWPKARHHKRRLLQPATMALIADRLVPSGVLHAATDHPG MLBr_02622|M.leprae_Br4923 SLTGVRVFFPDPWPKVRHHKRRFLQPATVELIADRLLPGGVLHTATDHPD MAV_4966|M.avium_104 SLTGVRVFFPDPWPKARHHKRRFLQPGTVGLIADRLLPGGVLHVATDHAG TH_0722|M.thermoresistible__bu SLIGVRVFFPDPWPKARHHKRRLLQPATVALIADRLKPGGVLHVATDHAG MAB_4506|M.abscessus_ATCC_1997 SLTAARVFFPDPWPKARHHKRRLLQPGTVALLSDRLRPGGTLHVATDHAN :* ..**********.******::** *: *::*** .* :*.**** . Mvan_0198|M.vanbaalenii_PYR-1 YAGHIAEVGDAEPRLRRIDPDDAGLPISTARPVTKYQRKA-LAGTEVAEL Mflv_0454|M.gilvum_PYR-GCK YAAHIAEVGDAEPRLRRVAMDSADLPMSVTRPVTKYERKA-LAGPVVTEL MSMEG_0252|M.smegmatis_MC2_155 YAEHIAEVGDAEPLLRRVS-TSDDLPISLERPVTKYQRKA-LAGTEVAEL MMAR_0448|M.marinum_M YAEHIIAAGDAEPALARVDPGVDSLPVSVVRPTTKYEMKAHNAGSSINEL MUL_1098|M.ulcerans_Agy99 YAEHIIAAGDAEPALARVDPGVDSLPVSVVRPTTKYEMKAHNAGSSINEL Mb0214c|M.bovis_AF2122/97 YAEHIAAAGDAEPRLVRVDPDTELLPISVVRPATKYERKAQLGGGAVIEL Rv0208c|M.tuberculosis_H37Rv YAEHIAAAGDAEPRLVRVDPDTELLPISVVRPATKYERKAQLGGGAVIEL MLBr_02622|M.leprae_Br4923 YAKQIAKFGDGEPLLSRADGRTQ-LPISTVRPTTKYETKAQHAGNVVTEL MAV_4966|M.avium_104 YAEHIADVGAGEPRLRPADPDSP-LPISVARPTTKYETKAQDAGSAVTEF TH_0722|M.thermoresistible__bu YAEFIAETGDAEPRLERVTGDLSALPISVRRPVTKYEGKAREANRAVADL MAB_4506|M.abscessus_ATCC_1997 YAEHIAEVGDGEPTLRRLRLDDPRIPVSVNRPTTKFEGKAHTVGSVINDF ** * * .** * :*:* **.**:: ** . : :: Mvan_0198|M.vanbaalenii_PYR-1 LWEKTTP-------- Mflv_0454|M.gilvum_PYR-GCK LWERTP--------- MSMEG_0252|M.smegmatis_MC2_155 VWEKRL--------- MMAR_0448|M.marinum_M IWKKQR--------- MUL_1098|M.ulcerans_Agy99 IWKKQR--------- Mb0214c|M.bovis_AF2122/97 LWKKHGCSERDLKIR Rv0208c|M.tuberculosis_H37Rv LWKKHGCSERDLKIR MLBr_02622|M.leprae_Br4923 IWKKRS--------- MAV_4966|M.avium_104 IWLRR---------- TH_0722|M.thermoresistible__bu LWSRKA--------- MAB_4506|M.abscessus_ATCC_1997 VWERL---------- :* :