For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLNALTAGLLIGLSAAALAGGAALLVLETAALRGWLVALAAGAGIASGDAAWSAVVAAAGSPLGRLLAPG AVVLQWTGVVVVLALWVLAVRALLRIDAVSGPPDAGLPTSPRRAYLECAAFTAADTVTVLFFLSVIVGAA PSYRGLEATVFVGGAFLASLSWQWGAAAIGRRRRRGVSVRTRRIVHLIDIVLLTVFMAYIGLGMYQT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0111 | - | - | 100% (207) | hypothetical protein Mvan_0111 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv2254c | - | 5e-05 | 28.46% (130) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_4164 | - | 6e-10 | 29.59% (196) | hypothetical protein MMAR_4164 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_3090 | - | 3e-05 | 28.15% (135) | ribose transport system permease protein RbsC |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_4027 | - | 4e-10 | 29.08% (196) | hypothetical protein MUL_4027 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4164|M.marinum_M ----MSAVAGIASAFGVG---------------LAAGLGVAVPLGAIGVL
MUL_4027|M.ulcerans_Agy99 ----MSVVAGIASAFGVG---------------LAAGLGVAVPLGAIGVL
Rv2254c|M.tuberculosis_H37Rv -------------------------------------------------M
Mvan_0111|M.vanbaalenii_PYR-1 ----------MLNALTAG---------------LLIGLSAAALAGGAALL
MSMEG_3090|M.smegmatis_MC2_155 MTDLIEETPSTSTATGSGRTRRQNIIVRFNLLFIFIALFAVASVTAPQFL
:
MMAR_4164|M.marinum_M LLREGVERGVRRAAVAAAAVSCVDVMY----CAAAMLVGRFAGPAVEGLG
MUL_4027|M.ulcerans_Agy99 LLREGVERGVRGAAVAAAAVSCVDVMY----CAAAMLVGRFAGPAVEGLG
Rv2254c|M.tuberculosis_H37Rv RYRD---------------------------------LETVAAPTINVLR
Mvan_0111|M.vanbaalenii_PYR-1 VLETAALRGWLVALAAGAGIASGDAAWSAVVAAAGSPLGRLLAPGAVVL-
MSMEG_3090|M.smegmatis_MC2_155 TSQNLANLLQQSSLTGIVAIGMTVVILTSGIDLSVGSVAALSGMLVAILI
. : . . *
MMAR_4164|M.marinum_M ----SWPEVIGALLLVVVAAAGIARGLRRCEPATQHWQSPRSSN------
MUL_4027|M.ulcerans_Agy99 ----SWPEVIGALLLVVVAAAGIARGLRRCEPATQHWQSPRSSD------
Rv2254c|M.tuberculosis_H37Rv ----VWPEIVGAIVLLVIAAMGIGHGLRPSPEPVPAPQKQLGCV------
Mvan_0111|M.vanbaalenii_PYR-1 ----QWTGVVVVLALWVLAVRALLR-IDAVSGPPDAGLPTSPRR------
MSMEG_3090|M.smegmatis_MC2_155 GMGIAWPLAMVVAIMSGLVLGGIMGGLSAYLALPAFMVTLAGMQSIRGLT
*. : . : :. .: :
MMAR_4164|M.marinum_M -----------------RFAFFFGLTAINPVTLVYFTAIAAT--------
MUL_4027|M.ulcerans_Agy99 -----------------RFAFFFGLTAINPVTLVYFTAIAAT--------
Rv2254c|M.tuberculosis_H37Rv -----------------RFALIFGLTAINPATFVYFTAVAVT--------
Mvan_0111|M.vanbaalenii_PYR-1 -----------------AYLECAAFTAADTVTVLFFLSVIVG--------
MSMEG_3090|M.smegmatis_MC2_155 FLTTNGTPTTAEIPIGLRFLGAGSVAGIPVVGLIFVLTTVIVGLVLRRTT
: ..:. . .::. :
MMAR_4164|M.marinum_M -----------------LEQSLGGGAAIAVVAGVGLASLLWQLLLVWIGA
MUL_4027|M.ulcerans_Agy99 -----------------LEQSLGGSAAIAVVTGVGLASLLWQLLLVWIGA
Rv2254c|M.tuberculosis_H37Rv -----------------LARALRATTAIAVVVGVALASLLWQLLLVSAGA
Mvan_0111|M.vanbaalenii_PYR-1 -----------------AAPSYRGLEATVFVGGAFLASLSWQWGAAAIGR
MSMEG_3090|M.smegmatis_MC2_155 FGEHVYAVGSNAKAARLSGLPVQRITTAAYVICSGLAALTGVLLTARLTI
. : . * **:* .
MMAR_4164|M.marinum_M ---VVGAGSTARTRRLTILVGNVVVG-------ALGVVMLASAAR-----
MUL_4027|M.ulcerans_Agy99 ---VVGAGSTARTRRLTILVGNVVVG-------ALGVVMLASAAR-----
Rv2254c|M.tuberculosis_H37Rv ---FLRSRATARVRRMTVLAGNAVIA-------AFGAVLVVHAFA-----
Mvan_0111|M.vanbaalenii_PYR-1 ---RRRRGVSVRTRRIVHLIDIVLLT-------VFMAYIGLGMYQT----
MSMEG_3090|M.smegmatis_MC2_155 GQPTANTGLELDAIAAVVLGGTSLFGGKGGVMGTFIAVLLLSVLRNLFNL
. . * . :. .: . :
MMAR_4164|M.marinum_M ---------------------------------
MUL_4027|M.ulcerans_Agy99 ---------------------------------
Rv2254c|M.tuberculosis_H37Rv ---------------------------------
Mvan_0111|M.vanbaalenii_PYR-1 ---------------------------------
MSMEG_3090|M.smegmatis_MC2_155 LGLSSFFQMLVTGLILVAALIMNYVLDRQAKTS