For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTNLSGPHQQQGDPKPAPRQVVASFDNYADAQRLVDRMSDGGFPVEHVRIIGDELRTVERVVGRMTKGRA AFAGAASGAWFGLFIGLLLAIFTVGPVWIVTMLTALVIGSFWGGVFGFVAHIATGGERDFDSVKSLEARR YDVCVSAELAAEAARFTQGP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_5256 | - | - | 100% (160) | hypothetical protein Mflv_5256 |
M. gilvum PYR-GCK | Mflv_2211 | - | 7e-24 | 40.29% (139) | hypothetical protein Mflv_2211 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1266 | - | 1e-24 | 43.57% (140) | hypothetical protein Mb1266 |
M. tuberculosis H37Rv | Rv1234 | - | 1e-24 | 43.57% (140) | hypothetical protein Rv1234 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1371 | - | 1e-23 | 44.06% (143) | hypothetical protein MAB_1371 |
M. marinum M | MMAR_4207 | - | 2e-24 | 43.66% (142) | hypothetical protein MMAR_4207 |
M. avium 104 | MAV_1373 | - | 1e-24 | 44.37% (142) | hypothetical protein MAV_1373 |
M. smegmatis MC2 155 | MSMEG_5062 | - | 1e-24 | 42.45% (139) | hypothetical protein MSMEG_5062 |
M. thermoresistible (build 8) | TH_2916 | - | 3e-54 | 64.56% (158) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4485 | - | 6e-26 | 43.88% (139) | hypothetical protein Mvan_4485 |
CLUSTAL 2.0.9 multiple sequence alignment Mb1266|M.bovis_AF2122/97 -----------MTSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGS Rv1234|M.tuberculosis_H37Rv -----------MTSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGS MMAR_4207|M.marinum_M -----------MTSPFQPGQVPGSTSPAGAAGRRGVPGLPTPPKGWPVGS MAV_1373|M.avium_104 -----------------------------------MPGLPTPPRGWPVGS MSMEG_5062|M.smegmatis_MC2_155 MRG----------------------------------ALPTPPRGWPIGS Mvan_4485|M.vanbaalenii_PYR-1 MHGTYRRSAETMTSPFQPGQNPAAAAGGPAAGRGRPVGLPTPPKGWPIGS MAB_1371|M.abscessus_ATCC_1997 -----------MGQPLTPGQPPRSTSQRSPLS--SSLSLPTPPQGWPIGS Mflv_5256|M.gilvum_PYR-GCK -----------MTNLSG------PHQ---------QQGDPKPAPRQVVAS TH_2916|M.thermoresistible__bu -----------MTHPSGSGAPGPTHTRAQSP----QSGQPQPG-QHCVAS . * * :.* Mb1266|M.bovis_AF2122/97 YPTYAEAQRAVDYLSEQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGG Rv1234|M.tuberculosis_H37Rv YPTYAEAQRAVDYLSEQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGG MMAR_4207|M.marinum_M YPTYAEAQRAVDYLSEQDFPVHQVTIVGVDLMQVERVTGRLTWPKVLGGG MAV_1373|M.avium_104 YPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGG MSMEG_5062|M.smegmatis_MC2_155 YPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGG Mvan_4485|M.vanbaalenii_PYR-1 YPTYAEAQRAVDHLSDQQFPVEHVTIVGVDLMQVERVTGRLTWPKVLGGG MAB_1371|M.abscessus_ATCC_1997 YPTYAEAQRAVDYLSDEQFPVENVTIVGVNLMQVERVTGRLSWPKVLGGG Mflv_5256|M.gilvum_PYR-GCK FDNYADAQRLVDRMSDGGFPVEHVRIIGDELRTVERVVGRMTKGRAAFAG TH_2916|M.thermoresistible__bu FDDYAGAQRLVDRMSDGGFPVQYLRIVGDDLRTVEHVTGRMTKARAALVG : ** *** ** :*: ***. : *:* :* **:*.**:: :. * Mb1266|M.bovis_AF2122/97 VLSGAWLGLFIGLVLGFFSPNPWS--ALVTGLVAGVFFGLITSAVPYAMA Rv1234|M.tuberculosis_H37Rv VLSGAWLGLFIGLVLGFFSPNPWS--ALVTGLVAGVFFGLITSAVPYAMA MMAR_4207|M.marinum_M VLSGAWLGLFIGLVLGFFSPNPWG--ALVTGLVAGVFFGLITSAVPYAMA MAV_1373|M.avium_104 VLSGAWLGLFIGLVLGFFSPNPWG--ALATGLVAGVFFGLITSAVPYSMA MSMEG_5062|M.smegmatis_MC2_155 VLSGAWLGLFIGLILGFFSPNPWS--ALLTGLIAGVFFGLITSAIPYAMA Mvan_4485|M.vanbaalenii_PYR-1 VLTGAWLGLFIGLVLGFFSPNPWS--ALITGLVAGVFFGLITSAIPYAMA MAB_1371|M.abscessus_ATCC_1997 MLSGAWLGLFIGLVLGMFSTNLAG--SLVVGLTVGLVFGLVTAAVPYAMT Mflv_5256|M.gilvum_PYR-GCK AASGAWFGLFIGLLLAIFTVGPVWIVTMLTALVIGSFWGGVFGFVAHIAT TH_2916|M.thermoresistible__bu AGSGAWFGLLIGLLLSIFAVGPMWLWVWLIATAIGAFWGAVFGFVAHWST :***:**:***:*.:*: . . * .:* : . :.: : Mb1266|M.bovis_AF2122/97 RGTRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI------------ Rv1234|M.tuberculosis_H37Rv RGTRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI------------ MMAR_4207|M.marinum_M RGTRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI------------ MAV_1373|M.avium_104 RGTRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI------------ MSMEG_5062|M.smegmatis_MC2_155 RGTRDFSSTMQLVAGRYDVLCDPQNAEQGRDLLARLTI------------ Mvan_4485|M.vanbaalenii_PYR-1 RGTRDFSSTMQLVAGRYDVLCDPGSAERGRDLLARLTI------------ MAB_1371|M.abscessus_ATCC_1997 RGTRDFASTMQLVAGRYDVLCEPAQAEAARDMLAKLAI------------ Mflv_5256|M.gilvum_PYR-GCK GGERDFDSVKSLEARRYDVCVSAELAAEAARFTQGP-------------- TH_2916|M.thermoresistible__bu GGERDFSSIKSLVAQRYDVYVPTEYADAAARXXXGAGRPDPCRAPPGTAV * *** * .* * **** . * . Mb1266|M.bovis_AF2122/97 -------------------------------------------------- Rv1234|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_4207|M.marinum_M -------------------------------------------------- MAV_1373|M.avium_104 -------------------------------------------------- MSMEG_5062|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_4485|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_1371|M.abscessus_ATCC_1997 -------------------------------------------------- Mflv_5256|M.gilvum_PYR-GCK -------------------------------------------------- TH_2916|M.thermoresistible__bu RDGPGAGPRWAPVRPAPSPTTRQDESGRCWGAHRSGPRSARCSAARPRTG Mb1266|M.bovis_AF2122/97 ------------------ Rv1234|M.tuberculosis_H37Rv ------------------ MMAR_4207|M.marinum_M ------------------ MAV_1373|M.avium_104 ------------------ MSMEG_5062|M.smegmatis_MC2_155 ------------------ Mvan_4485|M.vanbaalenii_PYR-1 ------------------ MAB_1371|M.abscessus_ATCC_1997 ------------------ Mflv_5256|M.gilvum_PYR-GCK ------------------ TH_2916|M.thermoresistible__bu ARPAPRRDARRWPSARSG