For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RGALPTPPRGWPIGSYPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGGVLSGA WLGLFIGLILGFFSPNPWSALLTGLIAGVFFGLITSAIPYAMARGTRDFSSTMQLVAGRYDVLCDPQNAE QGRDLLARLTI*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5062 | - | - | 100% (152) | hypothetical protein MSMEG_5062 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1266 | - | 4e-81 | 93.29% (149) | hypothetical protein Mb1266 |
| M. gilvum PYR-GCK | Mflv_2211 | - | 4e-80 | 93.96% (149) | hypothetical protein Mflv_2211 |
| M. tuberculosis H37Rv | Rv1234 | - | 5e-81 | 93.29% (149) | hypothetical protein Rv1234 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1371 | - | 1e-66 | 77.18% (149) | hypothetical protein MAB_1371 |
| M. marinum M | MMAR_4207 | - | 8e-79 | 91.22% (148) | hypothetical protein MMAR_4207 |
| M. avium 104 | MAV_1373 | - | 3e-80 | 93.24% (148) | hypothetical protein MAV_1373 |
| M. thermoresistible (build 8) | TH_2062 | - | 5e-78 | 90.54% (148) | PROBABLE TRANSMEMBRANE PROTEIN |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4485 | - | 3e-79 | 92.57% (148) | hypothetical protein Mvan_4485 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1266|M.bovis_AF2122/97 -----------MTSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGS
Rv1234|M.tuberculosis_H37Rv -----------MTSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGS
MMAR_4207|M.marinum_M -----------MTSPFQPGQVPGSTSPAGAAGRRGVPGLPTPPKGWPVGS
MAV_1373|M.avium_104 -----------------------------------MPGLPTPPRGWPVGS
Mflv_2211|M.gilvum_PYR-GCK -----------MTSPFQPGQNPASPAAGPAAGRGRQPALPTPPKGWPIGS
Mvan_4485|M.vanbaalenii_PYR-1 MHGTYRRSAETMTSPFQPGQNPAAAAGGPAAGRGRPVGLPTPPKGWPIGS
MSMEG_5062|M.smegmatis_MC2_155 -------------------------------MRG---ALPTPPRGWPIGS
TH_2062|M.thermoresistible__bu -----------MTSPFSPGQNPGQPQ---VPGRTPAPGLPTPPKGWPIGS
MAB_1371|M.abscessus_ATCC_1997 -----------MGQPLTPGQPPRSTS--QRSPLSSSLSLPTPPQGWPIGS
.*****:***:**
Mb1266|M.bovis_AF2122/97 YPTYAEAQRAVDYLSEQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGG
Rv1234|M.tuberculosis_H37Rv YPTYAEAQRAVDYLSEQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGG
MMAR_4207|M.marinum_M YPTYAEAQRAVDYLSEQDFPVHQVTIVGVDLMQVERVTGRLTWPKVLGGG
MAV_1373|M.avium_104 YPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGG
Mflv_2211|M.gilvum_PYR-GCK YSTYAEAQRAVDYLSDQEFPVQQVTIVGVDLMQVERVTGRLSWPKVLGGG
Mvan_4485|M.vanbaalenii_PYR-1 YPTYAEAQRAVDHLSDQQFPVEHVTIVGVDLMQVERVTGRLTWPKVLGGG
MSMEG_5062|M.smegmatis_MC2_155 YPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLTWPKVLGGG
TH_2062|M.thermoresistible__bu YPTYAEAQRAVDYLSDQQFPVQQVTIVGVDLMQVERVTGRLSWPKVLGGG
MAB_1371|M.abscessus_ATCC_1997 YPTYAEAQRAVDYLSDEQFPVENVTIVGVNLMQVERVTGRLSWPKVLGGG
*.**********:**:::***.:******:***********:********
Mb1266|M.bovis_AF2122/97 VLSGAWLGLFIGLVLGFFSPNPWSALVTGLVAGVFFGLITSAVPYAMARG
Rv1234|M.tuberculosis_H37Rv VLSGAWLGLFIGLVLGFFSPNPWSALVTGLVAGVFFGLITSAVPYAMARG
MMAR_4207|M.marinum_M VLSGAWLGLFIGLVLGFFSPNPWGALVTGLVAGVFFGLITSAVPYAMARG
MAV_1373|M.avium_104 VLSGAWLGLFIGLVLGFFSPNPWGALATGLVAGVFFGLITSAVPYSMARG
Mflv_2211|M.gilvum_PYR-GCK VLTGAWLGLFIGLILGFFSPNPWSALITGVIAGVFFGLITSAIPYAMARG
Mvan_4485|M.vanbaalenii_PYR-1 VLTGAWLGLFIGLVLGFFSPNPWSALITGLVAGVFFGLITSAIPYAMARG
MSMEG_5062|M.smegmatis_MC2_155 VLSGAWLGLFIGLILGFFSPNPWSALLTGLIAGVFFGLITSAIPYAMARG
TH_2062|M.thermoresistible__bu MLTGAWLGLFIGLILSFFSPAPWSALLTGLLLGIVFGLITSAVPYAMARG
MAB_1371|M.abscessus_ATCC_1997 MLSGAWLGLFIGLVLGMFSTNLAGSLVVGLTVGLVFGLVTAAVPYAMTRG
:*:**********:*.:**. .:* .*: *:.***:*:*:**:*:**
Mb1266|M.bovis_AF2122/97 TRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI
Rv1234|M.tuberculosis_H37Rv TRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI
MMAR_4207|M.marinum_M TRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI
MAV_1373|M.avium_104 TRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI
Mflv_2211|M.gilvum_PYR-GCK TRDFSSTMQLVAGRYDVLCDPPNAEKGRDLLARLTI
Mvan_4485|M.vanbaalenii_PYR-1 TRDFSSTMQLVAGRYDVLCDPGSAERGRDLLARLTI
MSMEG_5062|M.smegmatis_MC2_155 TRDFSSTMQLVAGRYDVLCDPQNAEQGRDLLARLTI
TH_2062|M.thermoresistible__bu TRDFSSTMQLVAGRYDVLCDPQNAERGRDMLARLTL
MAB_1371|M.abscessus_ATCC_1997 TRDFASTMQLVAGRYDVLCEPAQAEAARDMLAKLAI
****:**************:* .** .**:**:*::