For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LLWIVAAGLAMSALALVGSLALLIPDRLFTRVVLPLVALAAGALLGGAMFHMLPEAIEIVGDSTTVFAWC AAGIVSFHVLEQFLNWHHCHRPVSRHRPLGYLILVADGLHNLIGGLAVGSAFVVDIKLGIVTWLVAAAHE IPQELGDFGILVHSGWTPSRALFYNVVSALTFLVGALLAYAFAGRLDVEVLVPFAAGNFIYIALADLLPE IATTPALRDKLFYSTTFVIGLMLLWAVAQSV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4980 | - | - | 100% (242) | zinc/iron permease |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | Rv0318c | - | 3e-05 | 23.65% (203) | integral membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1419 | - | 1e-118 | 85.83% (240) | zinc/iron permease |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4980|M.gilvum_PYR-GCK --MLLWIVAAG----------LAMSALALVGSLALLIPDRLFTRVVLPLV Mvan_1419|M.vanbaalenii_PYR-1 MPVLLWIFVAG----------LAMSALALVGSVTLLIPERLFTRIVLPLV Rv0318c|M.tuberculosis_H37Rv MSLAVTMFKRARAEIFDRNREVGISNVTTAASLVTFPVLAGILGGVVPSV : : :. . :.:* :: ..*:. : : *:* * Mflv_4980|M.gilvum_PYR-GCK ALAAGALLGGAMFHMLPEAIEIVGDSTT-----------VFAWCAAGIVS Mvan_1419|M.vanbaalenii_PYR-1 ALAAGALLGGALFHMLPEAIALDSGSRT-----------VFAWCAAGIVS Rv0318c|M.tuberculosis_H37Rv RTPSAAMVSGVQHFAAGIVMAAVAGEVLPDLRSRGPLWLIVVGFSAGVAV .:.*::.*. .. .: ... :.. :**:. Mflv_4980|M.gilvum_PYR-GCK FHVLEQFL-NWHHCHRPVSRHRPLGYLILVADGLHNLIGGLAVGSAFVVD Mvan_1419|M.vanbaalenii_PYR-1 FHVLEQFL-HWHHCHRPVSQHRPLGYLILAADGLHNLIGGLAVGSAFIVD Rv0318c|M.tuberculosis_H37Rv LVALRRFDGHGEHQDGDDVGELPVGFLTVVAVDLF--IDGLLVATGATVS : .*.:* : .* . . *:*:* :.* .*. *.** *.:. *. Mflv_4980|M.gilvum_PYR-GCK IKLGIVTWLVAAAHEIPQELGDFGILVHSGWTPSRALFYNVVSALTFLVG Mvan_1419|M.vanbaalenii_PYR-1 IKLGVVTWLVSAAHEIPQELGDFGILVHSGWSASRALIYNVVSALTFLVG Rv0318c|M.tuberculosis_H37Rv SRTAIIITIALTVEVLFLGLAVALRLAGSGMPRIRAAATTSALSLVIAVG : .:: :. :.. : *. *. ** . ** . . :*.: ** Mflv_4980|M.gilvum_PYR-GCK ---ALLAYAFAGRLDVEVLVPFAAGNFIYIALADLLPEIATTPALRDKLF Mvan_1419|M.vanbaalenii_PYR-1 ---ALLAYAFAGRVDVTVLVPFAAGNFIYIALTDLLPEITTSPVLRDKAL Rv0318c|M.tuberculosis_H37Rv GVSGAVALGRAGNTVLTLVLAFAAGALLWLVVEELLVEAHETP---ERPW . :* . **. : :::.**** ::::.: :** * :* :: Mflv_4980|M.gilvum_PYR-GCK YSTTFVIGLMLLWAVAQSV Mvan_1419|M.vanbaalenii_PYR-1 YTTTFVAGIVLLWAVAQLA Rv0318c|M.tuberculosis_H37Rv MAVMFFAGFLILYGLGVME :. *. *:::*:.:.