For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SFVKNAAAGAVLGGSLLFTAGLGMAQAQPVDAPDGLVNLTVGDLTLLESVSADTAATAASALCGAEATDI SALATQVDGEGAPQTVCSGLPGGDLVVAQNVSSQTPLPAAPFPAEDAAPAEEAPAAESGSAEEGAGDGAD APAVPGAEESEG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4948 | - | - | 100% (153) | hypothetical protein Mflv_4948 |
| M. gilvum PYR-GCK | Mflv_2562 | - | 7e-05 | 28.81% (118) | hypothetical protein Mflv_2562 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2458 | - | 2e-06 | 31.79% (151) | PE-PGRS family protein |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_1558 | - | 6e-15 | 33.12% (157) | hypothetical protein MSMEG_1558 |
| M. thermoresistible (build 8) | TH_3983 | - | 9e-10 | 30.53% (131) | PUTATIVE - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_1471 | - | 1e-48 | 67.53% (154) | hypothetical protein Mvan_1471 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4948|M.gilvum_PYR-GCK ---------------------MSFVKNAAAGAVLGGSLLFTAG-------
Mvan_1471|M.vanbaalenii_PYR-1 ---------------------MNFVKNAAAGAVLGGSLLFTAG-------
MSMEG_1558|M.smegmatis_MC2_155 ------------------------MKRMTVGAALGGALFLSAG-------
TH_3983|M.thermoresistible__bu -------------------------------------LLFAAG-------
MMAR_2458|M.marinum_M MSFVNVVPNTVAAAAGDLASIRSALSEATAAAAGPTTDVLAAGGDEVSTA
.::**
Mflv_4948|M.gilvum_PYR-GCK ----------------------------LGMAQAQPVDA--PDGLVNLTV
Mvan_1471|M.vanbaalenii_PYR-1 ----------------------------LGMAQAQPAET--PDGLVSLSI
MSMEG_1558|M.smegmatis_MC2_155 ----------------------------MGIANAQPR-----DGQVDLAL
TH_3983|M.thermoresistible__bu ----------------------------LGLANAQPEPAGTEDGKIDVAL
MMAR_2458|M.marinum_M ISQLFGAHGQEFQVVSAQLRGFHDQLVRLMRAGAAAYASVEATAQQDLSM
: * * . . .:::
Mflv_4948|M.gilvum_PYR-GCK GDLTLLESVSADTAATAASALCGAEATDISALATQVDGEGAPQ-TVCSGL
Mvan_1471|M.vanbaalenii_PYR-1 GDVTLLESATADKAAAAAAAICGAVPADVSALVAQVDSEGAEQ-TVCSGL
MSMEG_1558|M.smegmatis_MC2_155 GTAGVLEDVPIGAASQVAAGVCDGDIGQITTLAETVDANGAQT-NVCNNT
TH_3983|M.thermoresistible__bu GTITTIEDVDVTAAEQIAGLVCGDSVTN--AQLSAVERGDAAE-VTCTST
MMAR_2458|M.marinum_M AEQGLVNAVNAPAQALLGHPIIGTGGSGSQSATTGTSTSGVTSGSVASGS
. :: . . : . : .. .. ....
Mflv_4948|M.gilvum_PYR-GCK PGGDLVVAQNVSS--QTPLPAAPFPAEDAAPAE-EAPAAESGS-AEEGAG
Mvan_1471|M.vanbaalenii_PYR-1 PGGDLVVAQNVAAAAETPAAQTPAPAETPAPAEGAAPEGESGTGAGLGAP
MSMEG_1558|M.smegmatis_MC2_155 IG-AVEFRQNDGAPASAEEPQSNQQGTQESTEGSAEESTDGASAEGTGPS
TH_3983|M.thermoresistible__bu QGSQVITFTQADEDDAGFAPAEHTPSDEVAANEADEVPSAPSTGPAGAEH
MMAR_2458|M.marinum_M AAGSVSSGATAGTVSTGATTGSVSSGATAGTVSAGATDGAVTSGTTASSS
. : . . .. : .
Mflv_4948|M.gilvum_PYR-GCK DG---ADAPAVPGAEESEG-------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 EGTGAADDGSVP-LPSDEG-------------------------------
MSMEG_1558|M.smegmatis_MC2_155 EDTDSSTAPTTTTTEEESGS------------------------------
TH_3983|M.thermoresistible__bu GGTDHGSR------------------------------------------
MMAR_2458|M.marinum_M DGTTVSAGGVAATDPGSDGGVAVSDPGSDGGVAVSGSGSGSGVAVGGTDT
. .
Mflv_4948|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1558|M.smegmatis_MC2_155 --------------------------------------------------
TH_3983|M.thermoresistible__bu --------------------------------------------------
MMAR_2458|M.marinum_M PGTSAPAPVTPNTFGDVVAAPYQTLISNTVTNLQSLDGAWAANPAPFLHQ
Mflv_4948|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1558|M.smegmatis_MC2_155 --------------------------------------------------
TH_3983|M.thermoresistible__bu --------------------------------------------------
MMAR_2458|M.marinum_M LIANQMGYAQTAATALQSSVSNLPAALAHLPADIQLGTHSLMAADPGAFL
Mflv_4948|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1558|M.smegmatis_MC2_155 --------------------------------------------------
TH_3983|M.thermoresistible__bu --------------------------------------------------
MMAR_2458|M.marinum_M HSLVTNQLGYAQTISTALQSAAHDFGTGAAALPAAYQAAFQDFMAGNVSG
Mflv_4948|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1558|M.smegmatis_MC2_155 --------------------------------------------------
TH_3983|M.thermoresistible__bu --------------------------------------------------
MMAR_2458|M.marinum_M AADHVESGLANLFITGFDVTPGSDAVLSITPTGTVGDLLPILGIPGQMAQ
Mflv_4948|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1558|M.smegmatis_MC2_155 --------------------------------------------------
TH_3983|M.thermoresistible__bu --------------------------------------------------
MMAR_2458|M.marinum_M NFTNLLPAGSVPELVSQNFTNIVNAATNTAVTSTLTLVVDPSSPTGVGVA
Mflv_4948|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1558|M.smegmatis_MC2_155 --------------------------------------------------
TH_3983|M.thermoresistible__bu --------------------------------------------------
MMAR_2458|M.marinum_M IDATMGLPLALGVEALGGPVDAIDAFGTSATAFVTAAQSGNVLAATAAVL
Mflv_4948|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1558|M.smegmatis_MC2_155 --------------------------------------------------
TH_3983|M.thermoresistible__bu --------------------------------------------------
MMAR_2458|M.marinum_M DAPAVVANGLFNGQSTFPLTIDALGIPTTLNLPMDGILVPAGPYTATIPD
Mflv_4948|M.gilvum_PYR-GCK --------------------------------------
Mvan_1471|M.vanbaalenii_PYR-1 --------------------------------------
MSMEG_1558|M.smegmatis_MC2_155 --------------------------------------
TH_3983|M.thermoresistible__bu --------------------------------------
MMAR_2458|M.marinum_M LGVTATVNGTPLGGVAPGLLTLLPEQLAEAIGASPVTD