For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LSLSMRRMLAAALGTGAALIAVAVPAQAQPAPPNCTAADLAGVATGVSAATSAYLFTRPAVNEFFTSLFA MDAEQRKAAVTAYMDANPQVASELRGIRQPLADLRHRCGFRHHPHHE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4803 | - | - | 100% (118) | hypothetical protein Mflv_4803 |
M. gilvum PYR-GCK | Mflv_0462 | - | 4e-30 | 56.90% (116) | hypothetical protein Mflv_0462 |
M. gilvum PYR-GCK | Mflv_4804 | - | 4e-29 | 55.14% (107) | hypothetical protein Mflv_4804 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0209 | - | 2e-10 | 32.71% (107) | hypothetical protein Mb0209 |
M. tuberculosis H37Rv | Rv0203 | - | 2e-10 | 32.71% (107) | hypothetical protein Rv0203 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1608c | - | 7e-25 | 56.00% (100) | hypothetical protein MAB_1608c |
M. marinum M | MMAR_3300 | - | 2e-24 | 53.21% (109) | hypothetical protein MMAR_3300 |
M. avium 104 | MAV_2237 | - | 1e-23 | 46.46% (127) | hypothetical protein MAV_2237 |
M. smegmatis MC2 155 | MSMEG_0243 | - | 5e-28 | 57.41% (108) | hypothetical protein MSMEG_0243 |
M. thermoresistible (build 8) | TH_3768 | - | 1e-27 | 53.57% (112) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_1435 | - | 5e-24 | 50.00% (106) | exported protein |
M. vanbaalenii PYR-1 | Mvan_1639 | - | 3e-33 | 68.32% (101) | hypothetical protein Mvan_1639 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4803|M.gilvum_PYR-GCK ----------------------------------------------MLSL Mvan_1639|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_0243|M.smegmatis_MC2_155 ---------------------------------------------MVAGA TH_3768|M.thermoresistible__bu -----------------------------------MVLSARTVRRAVAGT MMAR_3300|M.marinum_M MTREPQGSVADATHHSVPAPARKHLSCAMRAVPAAFGYSMKESFMVLFGA MUL_1435|M.ulcerans_Agy99 --------------MSLAAPT---------------GYRT-----IAVGI MAB_1608c|M.abscessus_ATCC_199 ----------------------------------------------MTAR MAV_2237|M.avium_104 ------------------------------MAPFARSARRVIGERIAAGA Mb0209|M.bovis_AF2122/97 ---------------------------------------------MKTGT Rv0203|M.tuberculosis_H37Rv ---------------------------------------------MKTGT Mflv_4803|M.gilvum_PYR-GCK SMRRMLAA-----ALGTGAALIAVAVPAQAQP--------APPNCTAADL Mvan_1639|M.vanbaalenii_PYR-1 ---MIVAA-----AVG-AAGVLSAAVPAHAQ----------PPNCTAADL MSMEG_0243|M.smegmatis_MC2_155 AGAGAVAG-----AMLFGAIP--SALADPAPN---------PPNCTAADL TH_3768|M.thermoresistible__bu IGAGAIAG-----ATLFSSIP--FAFADPEPE---------PPGCTAADL MMAR_3300|M.marinum_M ARSRLVAGGIVAGAMFLGAAGFASAVAGADPDDPAPVPAPAPPNCTAADL MUL_1435|M.ulcerans_Agy99 ATGALVA------AMLLGSA--ATAVA--DP----------PPNCTTADL MAB_1608c|M.abscessus_ATCC_199 VAHKLTAG-----LCAVAASLAGPLMAAADP----------PPNCTAADL MAV_2237|M.avium_104 AGVAMTVAG-LVATLVLTAGPAAADWPMDDPEP----APASLPNCTAADL Mb0209|M.bovis_AF2122/97 ATTRRRLLAVLIALALPGAAVALLAEPSATG---------ASDPCAASEV Rv0203|M.tuberculosis_H37Rv ATTRRRLLAVLIALALPGAAVALLAEPSATG---------ASDPCAASEV : . *::::: Mflv_4803|M.gilvum_PYR-GCK AGVATGVSAATSAYLFTRPAVNEFFTSLFAMDAEQ-RKAAVTAYMDANPQ Mvan_1639|M.vanbaalenii_PYR-1 AGIMTGVSAATSAYLFTHPPVNEFYTSIKDMAPEQ-KKAAVIAFADANPQ MSMEG_0243|M.smegmatis_MC2_155 AGVASGVSAGTSAYLFTHPQVNDFFTSLEGLPREE-VKPKVADYLAANPQ TH_3768|M.thermoresistible__bu AGVAAGVSAATSAYLFTHPEVNDFFTGLEGQHRAD-VRDTVAEYLDANPQ MMAR_3300|M.marinum_M AGVSAGVAAATSVYLFSHPEVNDYFTGLRGQPRDD-IRDQLQQYMDANPG MUL_1435|M.ulcerans_Agy99 AGISAGVAAATSTYLFTHPDVNEFFTGLRGQERDA-MRENVQNYLNANPD MAB_1608c|M.abscessus_ATCC_199 AGVATGVSAATSSYLFTHPDVNDFFTGLKGLPKDQ-VRQRAQQYLEENPQ MAV_2237|M.avium_104 AQVSAGVAAATSAYLFSHPDVNAYFTSLKGQPRDE-MRAQLKQYMDANPQ Mb0209|M.bovis_AF2122/97 ARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPK Rv0203|M.tuberculosis_H37Rv ARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPK * .*: . . ** ::* .* *.: . ** Mflv_4803|M.gilvum_PYR-GCK VASELRGIRQPLADLRHRCGFRHHPHHE------------ Mvan_1639|M.vanbaalenii_PYR-1 VAAEMRGIRQPLVDFRNRC----KPA-------------- MSMEG_0243|M.smegmatis_MC2_155 VKDELTAVRQPLVDLKNRCG--TAPAPELP---------- TH_3768|M.thermoresistible__bu VKAELTHIRQPLVDIKNRCGGPDLATDDIP---------- MMAR_3300|M.marinum_M VHAELQGIRQPLTDFRDRCQQ------------------- MUL_1435|M.ulcerans_Agy99 VKADLDGIRQPVVDFKDRCQ-------------------- MAB_1608c|M.abscessus_ATCC_199 VKADLHEIRRPLGDFRERCQER------------------ MAV_2237|M.avium_104 THADLEGIRQPLTDFQDRCR-------------------- Mb0209|M.bovis_AF2122/97 VASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR Rv0203|M.tuberculosis_H37Rv VASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR . :: : :*: *: **