For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RLKKVLKWNNAEMPDTGRVVGSELDEMVRTHGNLRLGSFRFWFVGQRWEWSDEVARMHGYEPGTVTPTTE LLLAHKHPEDRQHVQELLDRALHSGGSFSSRHRFIDTRGGEHTVLVLADRMTDADGAVVGTEGYYIDLTD TLDEARRDALNSTLPDLFAARASIEQAKGALMLVYGVGPDQAFELLQWRSQQTNTKLRTLAGRIVADFPT LRAPRDELRRQFDHLLLTVHQRVE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4425 | - | - | 100% (235) | putative PAS/PAC sensor protein |
| M. gilvum PYR-GCK | Mflv_1090 | - | 1e-54 | 46.12% (219) | putative PAS/PAC sensor protein |
| M. gilvum PYR-GCK | Mflv_3447 | - | 5e-51 | 48.48% (198) | putative PAS/PAC sensor protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | MLBr_01796 | - | 4e-19 | 38.02% (121) | hypothetical protein MLBr_01796 |
| M. abscessus ATCC 19977 | MAB_2523c | - | 4e-52 | 45.07% (213) | putative transcription antitermination regulator |
| M. marinum M | MMAR_0736 | - | 2e-76 | 61.88% (223) | putative regulatory protein |
| M. avium 104 | MAV_4107 | - | 1e-54 | 49.49% (198) | ANTAR domain-containing protein |
| M. smegmatis MC2 155 | MSMEG_0542 | - | 4e-48 | 46.46% (198) | ANTAR domain-containing protein |
| M. thermoresistible (build 8) | TH_1795 | - | 2e-56 | 52.00% (200) | antar domain protein |
| M. ulcerans Agy99 | MUL_3601 | - | 2e-75 | 60.99% (223) | putative regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_5727 | - | 6e-57 | 52.48% (202) | putative PAS/PAC sensor protein |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_4107|M.avium_104 --------------------------------------------------
MSMEG_0542|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_01796|M.leprae_Br4923 --------------------------------------------------
TH_1795|M.thermoresistible__bu --------------------------------------------------
Mvan_5727|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_2523c|M.abscessus_ATCC_199 --------------------------------------------------
MMAR_0736|M.marinum_M --------------------------------------------------
MUL_3601|M.ulcerans_Agy99 MSSPCHLPTPALSGQVPTVDGLQPSSQRSWCALPRALIGSASTLAQCGAG
Mflv_4425|M.gilvum_PYR-GCK --------------------------------------------------
MAV_4107|M.avium_104 --------------------------MTWN-LDGQTANVEQALAGGHTQP
MSMEG_0542|M.smegmatis_MC2_155 --------------------------MTTAPEDDDTAAAVQALTGGTPQQ
MLBr_01796|M.leprae_Br4923 --------------------------------------------------
TH_1795|M.thermoresistible__bu --------------------------------VPGDGSVEDALAGGSPQR
Mvan_5727|M.vanbaalenii_PYR-1 --------------------------------MPSDDSVEQALAGGAPQR
MAB_2523c|M.abscessus_ATCC_199 -------------------------MSDELSEEEADSELAQALAGGSPQH
MMAR_0736|M.marinum_M MQVRLGSWWLPGGSGAMISDVQQTAHTGEERPDRGTPSFATPISGAVDSH
MUL_3601|M.ulcerans_Agy99 VQVRLGSWWLPGGSGAMISDVQQTAHTGEERPDRGTPSFATPISGAVDNH
Mflv_4425|M.gilvum_PYR-GCK --MRLK---------------KVLKWNNAEMPDTGR-VVGSELDEMVRTH
MAV_4107|M.avium_104 ----AGWFRFYFADQRWEWSEQVQRMHGYEPGSITPTTELVLSHKHPDDR
MSMEG_0542|M.smegmatis_MC2_155 ----MGWFRFYFADQHWEWSAEVQRMHGYEPGTVTPTTELVLSHKHPDDR
MLBr_01796|M.leprae_Br4923 -------------------------MS-------SLTTDLMLTHRHLNDR
TH_1795|M.thermoresistible__bu ----VGWFRFYFADERWEWSPQVQQMHGYEPGTVTPTTELVLSHKHPDDY
Mvan_5727|M.vanbaalenii_PYR-1 ----VGWFRFYFADERWEWSEQVQILHGYEPGTVTPTTDLVLSHKHPDDR
MAB_2523c|M.abscessus_ATCC_199 ----VGWFRFYFADERWEWSPQVAQMHGYGPDEITPTTEIILSHKHPDDY
MMAR_0736|M.marinum_M --LSIGSFRFWFIGQRWEWSDEVARMHGYEPGAVVPTTKLLLSHKHPDDR
MUL_3601|M.ulcerans_Agy99 --LSIGSFRFWFIGQRWEWSDEVAGMHGYEPGAVVPTTKLLLSHKHPDDR
Mflv_4425|M.gilvum_PYR-GCK GNLRLGSFRFWFVGQRWEWSDEVARMHGYEPGTVTPTTELLLAHKHPEDR
: **.::*:*:* :*
MAV_4107|M.avium_104 ARVAATIDEIVTNHQAFSTRHRIIDAAGNVRHVVVVGDRLTDEQGEVIGA
MSMEG_0542|M.smegmatis_MC2_155 DQVAVDINDMMTGRRAFGRRHRIIDTSGTLRQVIVVSDQLHGFDGDVIGI
MLBr_01796|M.leprae_Br4923 GQVAATIDEILNTHKLFSTRHRIIDTSENVDNVIVIADQLFDDRGATIGT
TH_1795|M.thermoresistible__bu AQMVATLEQIRRSHNTFSTRHRIVDKHGDVHSVVVVGDQLCDENGAVIGT
Mvan_5727|M.vanbaalenii_PYR-1 QQVAATLDEMRRTHRTFSTRHRIVDTRGDTHDVVVIGDQLLDDAGRLIGT
MAB_2523c|M.abscessus_ATCC_199 RQVAATLQEIRRTAQAFSTRHRIIDVQQHVHHVVVIGDQLCDDNGVVVGT
MMAR_0736|M.marinum_M AHVQDLLDYALRSGESFSSRHRFVDTAGVVHDAIVVADRMVNESGVVQGT
MUL_3601|M.ulcerans_Agy99 AHVQDLLDYALRSGESFSSRHRFVDTAGVVHDAIVVADRMVNESGVVQGT
Mflv_4425|M.gilvum_PYR-GCK QHVQELLDRALHSGGSFSSRHRFIDTRGGEHTVLVLADRMTDADGAVVGT
:: :: *. ***::* .:*:.*:: . * *
MAV_4107|M.avium_104 QGFYIDVSIPHQQVQEEMMSARLAEISRNRARIEQTKGMLMLIYGISDSA
MSMEG_0542|M.smegmatis_MC2_155 RGFYIDVTPPRSRQEDAVITAEVAKITERRAVIEQVKGMLMLIYGIDENA
MLBr_01796|M.leprae_Br4923 YDFYIDVSALPEQVHEGIVIARLAKSTQNRAGIEQTKSMLMLIDGITYDT
TH_1795|M.thermoresistible__bu HGFYVDVTPNIAVADD-LVSAAVAQIAENRATIEQAKGMLMLIYRIGADA
Mvan_5727|M.vanbaalenii_PYR-1 HGFYVDITPTDTQAKA-MVTAALAEITENRAVIEQVKGMLMLIYRVDDEA
MAB_2523c|M.abscessus_ATCC_199 HGFYVDVTSSIRQERENSLTVAVVEIAENRSVIEQAKGMLMLVYRLNADA
MMAR_0736|M.marinum_M SGYYIDLTNTFDETRQEVLDEALPDLFENRAAIEQAKGVLMAVYRVSAEQ
MUL_3601|M.ulcerans_Agy99 SGYYIDLTNTFDETRQEVLDEALPDLFENRAAIEQAKGVLMAVYRVSAEE
Mflv_4425|M.gilvum_PYR-GCK EGYYIDLTDTLDEARRDALNSTLPDLFAARASIEQAKGALMLVYGVGPDQ
.:*:*:: : : . *: ***.*. ** : : .
MAV_4107|M.avium_104 AFELLKWLSQEGNVKLRPLAEQIAEDFRG--ADVPLPTRSEFDHLLLTAH
MSMEG_0542|M.smegmatis_MC2_155 AFDLLKWLSQENNVKLRVLADQVAKDFTAL-GDTGVLSRSKFDQLLLTAA
MLBr_01796|M.leprae_Br4923 PFNLLKYAVPGN-------QHQAAAG------------------------
TH_1795|M.thermoresistible__bu AFDLLKWRSQETNVKLRMLAEQLIEDFTGLDYQDELPTRGTFDHLLLTAH
Mvan_5727|M.vanbaalenii_PYR-1 AFELLRWRSQETNVKLRLLADQLLADYTTLSYDETLPPRATFDHLLLTAH
MAB_2523c|M.abscessus_ATCC_199 AFDVLKWRSQENNVKLRALAQQVVVDFGTLDFDKTLPARSVYDRLLLTAH
MMAR_0736|M.marinum_M AFRVLQWRSQETNTKLRALAKQVVAEVASLPPVSAL-VQSQFDHLLLTVH
MUL_3601|M.ulcerans_Agy99 AFRVLQWRSQETNTKLRALAKQVVAEVASLPPVSAL-VQSQFDHLLLTVH
Mflv_4425|M.gilvum_PYR-GCK AFELLQWRSQQTNTKLRTLAGRIVADFPTLRAPRDE-LRRQFDHLLLTVH
.* :*:: :
MAV_4107|M.avium_104 QRLKASDTRS-----
MSMEG_0542|M.smegmatis_MC2_155 RRAVSSDDDSMSTSA
MLBr_01796|M.leprae_Br4923 ---------------
TH_1795|M.thermoresistible__bu QRTNSDGRRAGIS--
Mvan_5727|M.vanbaalenii_PYR-1 QRVNRAGDTVDG---
MAB_2523c|M.abscessus_ATCC_199 QRIPR----------
MMAR_0736|M.marinum_M ERIPAESAS------
MUL_3601|M.ulcerans_Agy99 ERIPAESAS------
Mflv_4425|M.gilvum_PYR-GCK QRVE-----------