For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSDLPRMFPEWLDRIQIKYMNPVIKPLAGKVPGISVIKHRGRTSGRDYQTIVTAYRGDGRLAIVLGHGKT DWVKNVLAAGEADVQLFRDQVHIVNPRIEPNGDGVTALPAIARRQAKKIAVFVADIA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3614 | - | - | 100% (127) | hypothetical protein Mflv_3614 |
M. gilvum PYR-GCK | Mflv_1991 | - | 2e-10 | 32.43% (111) | hypothetical protein Mflv_1991 |
M. gilvum PYR-GCK | Mflv_3415 | - | 1e-05 | 32.86% (70) | hypothetical protein Mflv_3415 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1624c | - | 3e-41 | 61.29% (124) | hypothetical protein Mb1624c |
M. tuberculosis H37Rv | Rv1598c | - | 3e-41 | 61.29% (124) | hypothetical protein Rv1598c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2671 | - | 2e-30 | 50.00% (122) | hypothetical protein MAB_2671 |
M. marinum M | MMAR_2394 | - | 5e-40 | 62.10% (124) | hypothetical protein MMAR_2394 |
M. avium 104 | MAV_3188 | - | 2e-38 | 59.20% (125) | hypothetical protein MAV_3188 |
M. smegmatis MC2 155 | MSMEG_3204 | - | 2e-36 | 55.00% (120) | hypothetical protein MSMEG_3204 |
M. thermoresistible (build 8) | TH_1163 | - | 9e-49 | 70.08% (127) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_1571 | - | 3e-39 | 61.29% (124) | hypothetical protein MUL_1571 |
M. vanbaalenii PYR-1 | Mvan_2803 | - | 1e-37 | 58.33% (120) | hypothetical protein Mvan_2803 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3614|M.gilvum_PYR-GCK ---------MSDLPRMFPEWLDRIQIKYMNPVIKPLAGKVPGISVIKHRG TH_1163|M.thermoresistible__bu ---------MTDLPRMFPPWLDRIQIRYFNPVIKPFAGRLPGLSLLRHRG Mb1624c|M.bovis_AF2122/97 MSAKDHPNNAPGVPMVFPLWLERLQVKYINRALKPIARYLPGTATIEHRG Rv1598c|M.tuberculosis_H37Rv MSAKDHPNNAPGVPMVFPLWLERLQVKYINRALKPIARYLPGTATIEHRG MMAR_2394|M.marinum_M MSAKDHPNNAPGVPMVFPPWFERFQIKYINPALKPIARYLPGTATITHQG MUL_1571|M.ulcerans_Agy99 MSAKDHPNNAPGVPMVFPPWFERFQIKYINPALKPIARCLPGTATITHQG MAV_3188|M.avium_104 MSAKDHPNNAPGVPMVFPVWFENLQVKYLNSAIKPLARFLPGTATIKHRG Mvan_2803|M.vanbaalenii_PYR-1 --------------MIFPPWFEKLQIKYINPVIRPLSKRMPGLGVIKHRG MSMEG_3204|M.smegmatis_MC2_155 --------------MLFPPWLERLQLKYVNPVMTPVAKRLPGFTVIKHRG MAB_2671|M.abscessus_ATCC_1997 --------------MLLPEWLERAQIKYINPLMAPIARFLPSFATVTHYG ::* *::. *::*.* : *.: :*. : * * Mflv_3614|M.gilvum_PYR-GCK RTSGRDYQTIVTAYRGDGRLAIVLGHGKTDWVKNVLAAGEADVQLFR-DQ TH_1163|M.thermoresistible__bu RRSGRDYETVVTTYRRGNELAIVLGHGKTDWVKNVLAAGEADVVVRG-RE Mb1624c|M.bovis_AF2122/97 RKSGKPYQTIVTAYRKDGVLAIALAHGKTDWVKNVLAAGEADVHFAR-GV Rv1598c|M.tuberculosis_H37Rv RKSGKPYQTIVTAYRKDGVLAIALAHGKTDWVKNVLAAGEADVHFAR-GV MMAR_2394|M.marinum_M RKSGKPYKTIVTVYRKGNVLAIALGHGKTDWVKNVLAAGEADVFFAR-RQ MUL_1571|M.ulcerans_Agy99 RKSGKPYKTIVTVYRKGNVLAIAPGHGKTDWVKNVLAAGEADVFFAR-RQ MAV_3188|M.avium_104 RTSGKQYETIITPYRKGNTLAIALGHGKTNWVKNVLAAGEADVVFGRDRS Mvan_2803|M.vanbaalenii_PYR-1 RTSGTEYETIVTPYRKGTVLAIGLAHGKTNWVKNVLAAGEADIQIGK-KT MSMEG_3204|M.smegmatis_MC2_155 RKSGRAYETVVNSYRKDNVFAVILAHGKTNWVKNVLAAGGAEVKVFG-RE MAB_2671|M.abscessus_ATCC_1997 RTSGTKYETTVNAFRKGNVVSIALIHGKTNWTKNVIAAGGADITLFGGRQ * ** *:* :. :* . .:: ****:*.***:*** *:: . Mflv_3614|M.gilvum_PYR-GCK VHIVNPRIEPNGDGVTALPAIARRQAKKIAVFVADIA- TH_1163|M.thermoresistible__bu WHVVNPRIVPPGGEVAALPGFARLQAKNSAVFVADIA- Mb1624c|M.bovis_AF2122/97 VHVINPRIVPAGSDGQGLPRMARLQLRRIGVFVGDIA- Rv1598c|M.tuberculosis_H37Rv VHVINPRIVPAGSDGQGLPRMARLQLRRIGVFVGDIA- MMAR_2394|M.marinum_M VHIVNPRILPAGSQSDELPMMARVQLRRIGVFVADIA- MUL_1571|M.ulcerans_Agy99 VHIVNPRILPAGSQSDELPMMARVQLRRIGVFVADIA- MAV_3188|M.avium_104 VHLINPRILPAGSDGAGLPFMARVQLRWMGVFVADIA- Mvan_2803|M.vanbaalenii_PYR-1 LHLVRPRVLPAGTEDPSLPRTAQMLAKRSGVFVADIV- MSMEG_3204|M.smegmatis_MC2_155 FEITNPRILPAGSDDPSLPRIARLSARKAGILVAEIV- MAB_2671|M.abscessus_ATCC_1997 IHVVNPRIVEQGQGDPALTRATRQVNKRAGVFVAEIAQ .: .**: * *. :: : .::*.:*.