For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRKVLGRCAVLVLIAVTAGCGEQVADEVPAVATADLQADITARFVEAGATPQSVTCRDPLVGEIGRTARC EVVLGPTNSFEPIVTVTDVEGDRIGYELLPALSKEQLERGVARLAEAGVSPSARVVCQSGLLGQMGESAQ CDVTLAGVTVRRTAEVTGVDGLMMTFDLIPILTKAEVEESLLDELARHIGSRPDSATCTGDLEGRPGNTV DCAVVDGADRAAFILTVTSVDGTKIDYSYAPRG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3129 | - | - | 100% (243) | hypothetical protein Mflv_3129 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3059 | - | 9e-17 | 29.25% (147) | hypothetical protein Mb3059 |
| M. tuberculosis H37Rv | Rv3033 | - | 1e-16 | 29.25% (147) | hypothetical protein Rv3033 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3727c | - | 3e-08 | 38.03% (71) | hypothetical protein MAB_3727c |
| M. marinum M | MMAR_1670 | - | 4e-15 | 28.91% (128) | hypothetical protein MMAR_1670 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_1906 | - | 6e-16 | 29.69% (128) | hypothetical protein MUL_1906 |
| M. vanbaalenii PYR-1 | Mvan_3404 | - | 5e-98 | 71.08% (249) | hypothetical protein Mvan_3404 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1670|M.marinum_M --------------------------------------------------
MUL_1906|M.ulcerans_Agy99 --------------------------------------------------
Mb3059|M.bovis_AF2122/97 --------------------------------------------------
Rv3033|M.tuberculosis_H37Rv --------------------------------------------------
MAB_3727c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_3129|M.gilvum_PYR-GCK MRKVLGRCA-----VLVLIAVTAGCGEQVADEVPAVATADLQADITARFV
Mvan_3404|M.vanbaalenii_PYR-1 MRKAFGRLAGPLVGVVAAVAPMVGCGTDAADGVPAVSTADLQRDIAERFA
MMAR_1670|M.marinum_M MAHSIVRTFLVSGAAVGLMASAGACSCSIGTG------------------
MUL_1906|M.ulcerans_Agy99 MAHSIVRTFLVSGAAVGLMASAGACSCSIGTG------------------
Mb3059|M.bovis_AF2122/97 MAHSIVRTLLASGAATALIAIPTACSFSIGTSH-----------------
Rv3033|M.tuberculosis_H37Rv MAHSIVRTLLASGAATALIAIPTACSFSIGTSH-----------------
MAB_3727c|M.abscessus_ATCC_199 ------MSRLAALALAGVLLSGCEAHFSLGSS------------------
Mflv_3129|M.gilvum_PYR-GCK EAGATPQSVTCRDPLVGEIGRTARCEVVLGPTNSFEPIVTVTDVEGDRIG
Mvan_3404|M.vanbaalenii_PYR-1 EAGARPQSVTCKDPLVGEVGQTARCDVTMSPTNSFEPIVTVTGVDGETVD
: . .. : . :..
MMAR_1670|M.marinum_M ---SHSVSKSDVAEQIKAKMTDASGNKPESVTCPGDLPAKVGAQLNCEMK
MUL_1906|M.ulcerans_Agy99 ---SHSVSKSDVAEQIKAKMTDASGNKPESVTCPGDLPAKVGAQANCEMK
Mb3059|M.bovis_AF2122/97 ---SHSVSKAEVARQITAKMTDAAGNKPESVTCPSDLPAEVGAELNCEMK
Rv3033|M.tuberculosis_H37Rv ---SHSVSKAEVARQITAKMTDAAGNKPESVTCPSDLPAEVGAELNCEMK
MAB_3727c|M.abscessus_ATCC_199 ---SPELAKAKLEAGLKDAITEKTG-------------------------
Mflv_3129|M.gilvum_PYR-GCK YELLPALSKEQLERGVAR-LAEAGVSPSARVVCQSGLLGQMGESAQCDVT
Mvan_3404|M.vanbaalenii_PYR-1 YELLPALSVEQLERAVARLVAEDGGPPDSTVTCQAGLLGRPGEVARCDVT
:: .: : :::
MMAR_1670|M.marinum_M VKDSTYNVNVTVTSVDGKDVKFDMVETVDKDKVAHIISNKLYQKVGQRPD
MUL_1906|M.ulcerans_Agy99 VKDSTYNVNVTVTSVDGKDVKFDMVETVDKDKVAHIISNKLYQKVGQRPD
Mb3059|M.bovis_AF2122/97 IKDRTFNVNVTVTSVDGSDVKFDMVETVDKNQVANIISDKLFQRVGARPD
Rv3033|M.tuberculosis_H37Rv IKDRTFNVNVTVTSVDGSDVKFDMVETVDKNQVANIISDKLFQRVGARPD
MAB_3727c|M.abscessus_ATCC_199 ---------VTLTSVS----------------------------------
Mflv_3129|M.gilvum_PYR-GCK LAGVTVRRTAEVTGVDGLMMTFDLIPILTKAEVEESLLDELARHIGSRPD
Mvan_3404|M.vanbaalenii_PYR-1 AGGVTLRRTAEVTGVDGLMMNFDLVPMLTKAEVERSLLDELARHLGRRPD
. :*.*.
MMAR_1670|M.marinum_M SVTCPDNLKGVVGATLRCQLIDG-SKTYGVNVTVTSIDAGDVRFDFKVDD
MUL_1906|M.ulcerans_Agy99 SVTCPDNLKGVVGATLRCQLIDG-SKTYGVNVTVTSIDAGDVRFDFKVDD
Mb3059|M.bovis_AF2122/97 SVTCPDNLKGVEGAKLRCRLTDG-SKTYGISVIVTSVDAGDVNFDFKVDD
Rv3033|M.tuberculosis_H37Rv SVTCPDNLKGVEGAKLRCRLTDG-SKTYGISVIVTSVDAGDVNFDFKVDD
MAB_3727c|M.abscessus_ATCC_199 ---CDGPLKGEKGATQRCAVIDGEGKTIGVTVTATGVEGTKISFNWKVDD
Mflv_3129|M.gilvum_PYR-GCK SATCTGDLEGRPGNTVDCAVVDG-ADRAAFILTVTSVDGTKIDYSYAPRG
Mvan_3404|M.vanbaalenii_PYR-1 SATCSGDLEGRPGNSVDCAVTDG-PESAAFILTVTAVDGDRIDYSYAPRG
* . *:* * . * : ** . .. : .*.::. : :.: .
MMAR_1670|M.marinum_M HPE----
MUL_1906|M.ulcerans_Agy99 HPE----
Mb3059|M.bovis_AF2122/97 HPE----
Rv3033|M.tuberculosis_H37Rv HPE----
MAB_3727c|M.abscessus_ATCC_199 QPASTST
Mflv_3129|M.gilvum_PYR-GCK -------
Mvan_3404|M.vanbaalenii_PYR-1 -------