For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRLAALALAGVLLSGCEAHFSLGSSSPELAKAKLEAGLKDAITEKTGVTLTSVSCDGPLKGEKGATQRCA VIDGEGKTIGVTVTATGVEGTKISFNWKVDDQPASTST*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3727c | - | - | 100% (109) | hypothetical protein MAB_3727c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3059 | - | 1e-09 | 39.39% (66) | hypothetical protein Mb3059 |
M. gilvum PYR-GCK | Mflv_3129 | - | 8e-09 | 38.03% (71) | hypothetical protein Mflv_3129 |
M. tuberculosis H37Rv | Rv3033 | - | 1e-09 | 39.39% (66) | hypothetical protein Rv3033 |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_1670 | - | 2e-10 | 42.47% (73) | hypothetical protein MMAR_1670 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_3161 | - | 4e-13 | 37.14% (105) | hypothetical protein MSMEG_3161 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1906 | - | 1e-10 | 42.47% (73) | hypothetical protein MUL_1906 |
M. vanbaalenii PYR-1 | Mvan_3404 | - | 9e-07 | 33.80% (71) | hypothetical protein Mvan_3404 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3059|M.bovis_AF2122/97 -------------------------------------------------- Rv3033|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_1670|M.marinum_M -------------------------------------------------- MUL_1906|M.ulcerans_Agy99 -------------------------------------------------- MAB_3727c|M.abscessus_ATCC_199 -------------------------------------------------- MSMEG_3161|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_3129|M.gilvum_PYR-GCK MRKVLGRCA-----VLVLIAVTAGCGEQVADEVPAVATADLQADITARFV Mvan_3404|M.vanbaalenii_PYR-1 MRKAFGRLAGPLVGVVAAVAPMVGCGTDAADGVPAVSTADLQRDIAERFA Mb3059|M.bovis_AF2122/97 --------------------MAHSIVRTLLASGAATALIAIPTACSFSIG Rv3033|M.tuberculosis_H37Rv --------------------MAHSIVRTLLASGAATALIAIPTACSFSIG MMAR_1670|M.marinum_M --------------------MAHSIVRTFLVSGAAVGLMASAGACSCSIG MUL_1906|M.ulcerans_Agy99 --------------------MAHSIVRTFLVSGAAVGLMASAGACSCSIG MAB_3727c|M.abscessus_ATCC_199 -------------------------------------------------- MSMEG_3161|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_3129|M.gilvum_PYR-GCK EAGATPQSVTCRDPLVGEIGRTARCEVVLGPTNSFEPIVTVTDVEGDRIG Mvan_3404|M.vanbaalenii_PYR-1 EAGARPQSVTCKDPLVGEVGQTARCDVTMSPTNSFEPIVTVTGVDGETVD Mb3059|M.bovis_AF2122/97 TSHSHSVSKAEVARQITAKMTDAAGNKPESVTCPSDLPAEVGAELNCEMK Rv3033|M.tuberculosis_H37Rv TSHSHSVSKAEVARQITAKMTDAAGNKPESVTCPSDLPAEVGAELNCEMK MMAR_1670|M.marinum_M TG-SHSVSKSDVAEQIKAKMTDASGNKPESVTCPGDLPAKVGAQLNCEMK MUL_1906|M.ulcerans_Agy99 TG-SHSVSKSDVAEQIKAKMTDASGNKPESVTCPGDLPAKVGAQANCEMK MAB_3727c|M.abscessus_ATCC_199 ---MSRLAALALAG---VLLSGCEAHFSLGSSSP---------------- MSMEG_3161|M.smegmatis_MC2_155 MTDVRSRVGLVVAGTVAALLLGACGGEPAGGSQP---------------- Mflv_3129|M.gilvum_PYR-GCK YELLPALSKEQLERGVAR-LAEAGVSPSARVVCQSGLLGQMGESAQCDVT Mvan_3404|M.vanbaalenii_PYR-1 YELLPALSVEQLERAVARLVAEDGGPPDSTVTCQAGLLGRPGEVARCDVT : : Mb3059|M.bovis_AF2122/97 IKDRTFNVNVTVTSVDGSDVKFDMVETVDKNQVANIISDKLFQRVGARPD Rv3033|M.tuberculosis_H37Rv IKDRTFNVNVTVTSVDGSDVKFDMVETVDKNQVANIISDKLFQRVGARPD MMAR_1670|M.marinum_M VKDSTYNVNVTVTSVDGKDVKFDMVETVDKDKVAHIISNKLYQKVGQRPD MUL_1906|M.ulcerans_Agy99 VKDSTYNVNVTVTSVDGKDVKFDMVETVDKDKVAHIISNKLYQKVGQRPD MAB_3727c|M.abscessus_ATCC_199 --------------------------ELAKAKLEAGLKDAITEKTGVTLT MSMEG_3161|M.smegmatis_MC2_155 --------------------------TVAKAKLQTLAKEKLEAAAKRKAK Mflv_3129|M.gilvum_PYR-GCK LAGVTVRRTAEVTGVDGLMMTFDLIPILTKAEVEESLLDELARHIGSRPD Mvan_3404|M.vanbaalenii_PYR-1 AGGVTLRRTAEVTGVDGLMMNFDLVPMLTKAEVERSLLDELARHLGRRPD : * :: : : Mb3059|M.bovis_AF2122/97 SVTCPDNLKGVEGAKLRCRLTDG-SKTYGISVIVTSVDAG----DVNFDF Rv3033|M.tuberculosis_H37Rv SVTCPDNLKGVEGAKLRCRLTDG-SKTYGISVIVTSVDAG----DVNFDF MMAR_1670|M.marinum_M SVTCPDNLKGVVGATLRCQLIDG-SKTYGVNVTVTSIDAG----DVRFDF MUL_1906|M.ulcerans_Agy99 SVTCPDNLKGVVGATLRCQLIDG-SKTYGVNVTVTSIDAG----DVRFDF MAB_3727c|M.abscessus_ATCC_199 SVSCDGPLKGEKGATQRCAVIDGEGKTIGVTVTATGVEG----TKISFNW MSMEG_3161|M.smegmatis_MC2_155 SVICEDGIVGEVGATQRCVLTAKDGTRIGVTARVDGIEGRGADARVSIDF Mflv_3129|M.gilvum_PYR-GCK SATCTGDLEGRPGNTVDCAVVDG-ADRAAFILTVTSVDGT----KIDYSY Mvan_3404|M.vanbaalenii_PYR-1 SATCSGDLEGRPGNSVDCAVTDG-PESAAFILTVTAVDGD----RIDYSY *. * . : * * . * : .. . .::. : .: Mb3059|M.bovis_AF2122/97 KVDDHPE---- Rv3033|M.tuberculosis_H37Rv KVDDHPE---- MMAR_1670|M.marinum_M KVDDHPE---- MUL_1906|M.ulcerans_Agy99 KVDDHPE---- MAB_3727c|M.abscessus_ATCC_199 KVDDQPASTST MSMEG_3161|M.smegmatis_MC2_155 KVDDKPIE--- Mflv_3129|M.gilvum_PYR-GCK APRG------- Mvan_3404|M.vanbaalenii_PYR-1 APRG------- .