For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ANRAAKKEAKAARKAASKQRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGLSVVGGIYAGGFTTYMLIP LGIVLGALVAFIIFGRRAQKSVYKKAEGQTGAAAWALDNMRGKWRVTPGVAATGHFDAVHRVIGRPGVIF VGEGAANRVKPLLAQEKKRTARLIGDTPIYDIIIGNGEGEVPLSKLERHLNKLPANITVKQLDALESRLA ALGSKIGPAAMPKGPLPAQAKMRGVQRTVRRR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2931 | - | - | 100% (243) | hypothetical protein Mflv_2931 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2242 | - | 1e-111 | 79.25% (241) | transmembrane protein |
M. tuberculosis H37Rv | Rv2219 | - | 1e-111 | 79.25% (241) | transmembrane protein |
M. leprae Br4923 | MLBr_00857 | - | 1e-104 | 76.86% (242) | hypothetical protein MLBr_00857 |
M. abscessus ATCC 19977 | MAB_1940c | - | 2e-98 | 73.86% (241) | hypothetical protein MAB_1940c |
M. marinum M | MMAR_3287 | - | 1e-111 | 78.84% (241) | transmembrane protein |
M. avium 104 | MAV_2269 | - | 1e-112 | 80.08% (241) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_4287 | - | 1e-119 | 86.67% (240) | integral membrane protein |
M. thermoresistible (build 8) | TH_0218 | - | 1e-113 | 82.30% (243) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_1342 | - | 1e-111 | 78.84% (241) | transmembrane protein |
M. vanbaalenii PYR-1 | Mvan_3583 | - | 1e-122 | 89.58% (240) | hypothetical protein Mvan_3583 |
CLUSTAL 2.0.9 multiple sequence alignment Mb2242|M.bovis_AF2122/97 MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYM Rv2219|M.tuberculosis_H37Rv MAKPRNAAESKAAKAQANAARKAAARQRRAQLWQAFTLQRKEDKRLLPYM MMAR_3287|M.marinum_M MARSRNSAENKAAKAEAKAARKAAARERRTQLWQAFNLQRKEDKRLLPYM MUL_1342|M.ulcerans_Agy99 MARSRNSAENKAAKAEAKAARKAAARERRTQLWQAFNLQRKEDKRLLPYM MAV_2269|M.avium_104 MAKSRSAADNKAARAQAQAARKAAARERRAQLWQAFNIQRQEDKRLLPYM MLBr_00857|M.leprae_Br4923 MAKPRNAAAHKAARAEAKAARKAASRQRRLQLWQAFTIQRTEDKRLIPYM TH_0218|M.thermoresistible__bu MVKSRNSAAAKAAKAEAKAARKAAARQRRSQLWQAFKIQRQEDKRLLPYM Mflv_2931|M.gilvum_PYR-GCK MAN-------RAAKKEAKAARKAASKQRRSQLWQAFQIQRKEDKRLLPYM MSMEG_4287|M.smegmatis_MC2_155 MAKTRNTAETKAAKAAAKAARKEASKQRRSQLWQAFQIQRKEDKRLVPYM Mvan_3583|M.vanbaalenii_PYR-1 MAKSRNPAETKAAKAEAKAARKAASKQRRSQLWQAFQMQRKEDKRLLPYM MAB_1940c|M.abscessus_ATCC_199 MAKSLSPAEAKAAKAEAKARRKAESKARRAQMWQAFQIQRKEDKRLLPYM *.. :**: *:* ** :: ** *:**** :** *****:*** Mb2242|M.bovis_AF2122/97 IGAFLLIVGASVGVGVWAGGFTMLTMIPLGVLLGALVAFVIFGRRAQRTV Rv2219|M.tuberculosis_H37Rv IGAFLLIVGASVGVGVWAGGFTMFTMIPLGVLLGALVAFVIFGRRAQRTV MMAR_3287|M.marinum_M IGAFVLIVGISVAVGVWAGGLTMITMIPFGLLLGGLVAFIIFGRRAQRAV MUL_1342|M.ulcerans_Agy99 IGAFVLIVGISVAVGVWAGGLTMITMIPFGLLLGGLVAFIIFGRRAQRAV MAV_2269|M.avium_104 IGAFLLVVGVSVAVGVWAGGLTMITLIPFGVVLGALVAFIVFGRRAQKSV MLBr_00857|M.leprae_Br4923 IAAFSLMVSASVTAGVLVGGLTMITLILLGVVLGALVAFIIFGRRTQQSV TH_0218|M.thermoresistible__bu ISAFVLIVAASVVLGVLAGGFTMYMLIPLGVVLGALVAFIIFGRRAQRTV Mflv_2931|M.gilvum_PYR-GCK IGAFVLIVGLSVVGGIYAGGFTTYMLIPLGIVLGALVAFIIFGRRAQKSV MSMEG_4287|M.smegmatis_MC2_155 AGAFVLIVAIAVVAGLLIGGFTKFTLIPLGVVLGALVAFIIFGRRAQKSV Mvan_3583|M.vanbaalenii_PYR-1 IGAFVLIVAASVAVGLYAGGFTMFMLIPLGIVLGALVAFIIFGRRAQKSV MAB_1940c|M.abscessus_ATCC_199 IGAIVVIVAAFAVAGYFSGGISTFLFPILGVVLGVLVAFIIFGRRVQKSV .*: ::*. . * **:: : :*::** ****::****.*::* Mb2242|M.bovis_AF2122/97 YRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGVIFVG Rv2219|M.tuberculosis_H37Rv YRKAEGQTGAAAWALDNLRGKWRVTPGVAATGNLDAVHRVIGRPGVIFVG MMAR_3287|M.marinum_M YSKAEGQTGAAAWALENLRGKWRVSPGVAATGHFDAVHRVLGRPGVILVG MUL_1342|M.ulcerans_Agy99 YSKAEGQTGAAAWALENLRGKWRVSPGVAATGHFDAVHRVLGRPGVILVG MAV_2269|M.avium_104 YRKAEGQTGAAAWALDNLRGKWRVTPGVAATGHFDAVHRVIGRPGVILVG MLBr_00857|M.leprae_Br4923 YHKAEGQTGGAAWALDNLRGKWRVSPGVAANGHFDAVHRVIGRPGVIFVA TH_0218|M.thermoresistible__bu YQKAEGQTGAAAWALENMRGKWRVTPGVAATGHFDAVHRVIGRPGVILVG Mflv_2931|M.gilvum_PYR-GCK YKKAEGQTGAAAWALDNMRGKWRVTPGVAATGHFDAVHRVIGRPGVIFVG MSMEG_4287|M.smegmatis_MC2_155 YRKAEGQTGAAAWALDNLRGKWRVTPGVAATGHFDAVHRVIGRPGVIFVG Mvan_3583|M.vanbaalenii_PYR-1 YRKAEGQTGAAAWALDNMRGKWRVTPGVAATGHFDAVHRVIGRPGVIFVA MAB_1940c|M.abscessus_ATCC_199 FTKAEGQKGAAGWALDNMRGRWRVTTAVAGTTQLDVVHRVIGRPGIIFVA : *****.*.*.***:*:**:***:..**.. ::*.****:****:*:*. Mb2242|M.bovis_AF2122/97 EGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTR Rv2219|M.tuberculosis_H37Rv EGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVPLAKLERHLTR MMAR_3287|M.marinum_M EGSAARVKPLLAQEKKRTARLVGEVPIYDIIVGNGDGEIPLAKLERHLTR MUL_1342|M.ulcerans_Agy99 EGSAARVKPLLAQEKKRTARLVGEVPIYDIIVGNGDGEIPLAKLERHLTR MAV_2269|M.avium_104 EGSPTRVRPLLAQEKKRTARLIGDVPIYDIIVGNGEDEVPLAKLERHLTR MLBr_00857|M.leprae_Br4923 EGSAARVKPLLAQEKKRTARLVGDVPIYDIIVGNGDGEVALVKLERHLAR TH_0218|M.thermoresistible__bu EGSPTRLKPLLAQEKKRTARLVGDVPIYDIVVGNDEGQVPLAKLERHLTR Mflv_2931|M.gilvum_PYR-GCK EGAANRVKPLLAQEKKRTARLIGDTPIYDIIIGNGEGEVPLSKLERHLNK MSMEG_4287|M.smegmatis_MC2_155 EGAPNRVKPLLAQEKKRTARLVGETPIYDIIVGNGEGEVPLAKLERHLNK Mvan_3583|M.vanbaalenii_PYR-1 EGSPTRVKPLLAQEKKRTARLVGDVPIYDVIIGNGEGEVPLAKLERHLTK MAB_1940c|M.abscessus_ATCC_199 EGAPGRLGPLLAQEKKRTARLVGDTPIYDVIVGNEDGQVPLSKLERHLTK **:. *: *************:*:.****:::** :.::.* ****** : Mb2242|M.bovis_AF2122/97 LPANITVKQMDTVESRLAALGSRAG-AGVMPKGPLPTTAKMRS-VQRTVR Rv2219|M.tuberculosis_H37Rv LPANITVKQMDTVESRLAALGSRAG-AGVMPKGPLPTTAKMRS-VQRTVR MMAR_3287|M.marinum_M LPANITVKQLDSLESRLAALGSRAG-AGALPKGPLPNAGKMRG-VQRSVR MUL_1342|M.ulcerans_Agy99 LPANITVKQLDSLESRLAALGSRAG-AGALPKGPLPNAGKMRG-VQRSVR MAV_2269|M.avium_104 LPANITVKQMDTLESRLAALGSRAG-AAVMPKGPLPNAGKMRG-VQRTVR MLBr_00857|M.leprae_Br4923 LPANISVKQVDILESRLAALGSRAG-ASLIPKGPLPNAGKMRG-VQRTVR TH_0218|M.thermoresistible__bu LPSNISVKQMDALESRLAALSAKAGPAAAMPKGPLPSQAKLRG-MQRTVR Mflv_2931|M.gilvum_PYR-GCK LPANITVKQLDALESRLAALGSKIG-PAAMPKGPLPAQAKMRG-VQRTVR MSMEG_4287|M.smegmatis_MC2_155 LPANITVKQMDAIESRLAALGTKVG-PAAVPKGPLPQAAKMRG-VQRTAR Mvan_3583|M.vanbaalenii_PYR-1 LPANITVKQMDSLESRLAALGTKVG-PAAMPKGPLPAQAKMRG-IQRTVR MAB_1940c|M.abscessus_ATCC_199 LPANITAKQMDSLESRLAALGSRAA---AMPKGPLPGQAKMRGGMQRTIR **:**:.**:* :*******.:: . :****** .*:*. :**: * Mb2242|M.bovis_AF2122/97 RK Rv2219|M.tuberculosis_H37Rv RK MMAR_3287|M.marinum_M RR MUL_1342|M.ulcerans_Agy99 RR MAV_2269|M.avium_104 RK MLBr_00857|M.leprae_Br4923 RK TH_0218|M.thermoresistible__bu RR Mflv_2931|M.gilvum_PYR-GCK RR MSMEG_4287|M.smegmatis_MC2_155 RR Mvan_3583|M.vanbaalenii_PYR-1 RR MAB_1940c|M.abscessus_ATCC_199 RR *: