For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLNPVRNLLKSPPRWRTAAALAVTTTLLAACGGGASDVAGDSGGSGSAETTLTLVAFAVPEPGWSKAAPA FSATEEGEGVEVTASYGASGDQSRSVESGKPADVVNFSVEPDITRLVKAGKVDENWNAGPNKGIAFGSIV TFAVRPGNPKNIRTWDDLLQPGIEVITPSPLSSGAAKWNLLAPYAYASNGGQNPEAGIEFVNKLVTEHVK LRPGSGREATDVFRQGSGDVLLAYENEALNFDLEHVNPAQTFKIENPTAVVNTSRHLDKAQAFVDFQFTP EGQKLWAEAGFRPVDPAVQAEFADKFPAPEKLWTIDDLGGWKNVDTQLFDKDNGTITKIYKQATG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_2678 | - | - | 100% (345) | sulfate ABC transporter, periplasmic sulfate-binding protein |
| M. gilvum PYR-GCK | Mflv_3859 | - | 1e-07 | 23.47% (277) | molybdenum ABC transporter, periplasmic molybdate-binding |
| M. gilvum PYR-GCK | Mflv_1080 | - | 2e-05 | 22.88% (319) | extracellular solute-binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2422c | subI | 1e-131 | 67.34% (346) | sulfate-binding lipoprotein |
| M. tuberculosis H37Rv | Rv2400c | subI | 1e-131 | 67.34% (346) | sulfate-binding lipoprotein |
| M. leprae Br4923 | MLBr_00615 | subI | 1e-126 | 63.93% (341) | putative sulphate-binding protein |
| M. abscessus ATCC 19977 | MAB_1652 | - | 1e-130 | 65.98% (341) | sulfate ABC transporter, sulfate-binding protein SubI |
| M. marinum M | MMAR_3718 | subI | 1e-126 | 66.57% (329) | sulfate-binding lipoprotein SubI |
| M. avium 104 | MAV_1782 | - | 1e-132 | 65.79% (342) | sulfate ABC transporter, sulfate-binding protein |
| M. smegmatis MC2 155 | MSMEG_4533 | - | 1e-149 | 75.37% (337) | sulfate-binding protein |
| M. thermoresistible (build 8) | TH_1447 | subI | 1e-145 | 74.63% (335) | PROBABLE SULFATE-BINDING LIPOPROTEIN SUBI |
| M. ulcerans Agy99 | MUL_3661 | subI | 1e-126 | 65.96% (329) | sulfate-binding lipoprotein SubI |
| M. vanbaalenii PYR-1 | Mvan_3875 | - | 1e-178 | 86.80% (341) | sulfate ABC transporter, periplasmic sulfate-binding protein |
CLUSTAL 2.0.9 multiple sequence alignment
MLBr_00615|M.leprae_Br4923 -------MFKDIGRFMRWRHSMVVGVTLASTTDVVAACHGGASDVVGG-G
MAV_1782|M.avium_104 ---------MDIRTAARWRP----VLALVLTAGVVAGCHGGASDAVGGTG
Mb2422c|M.bovis_AF2122/97 MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAG
Rv2400c|M.tuberculosis_H37Rv MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAG
MMAR_3718|M.marinum_M -------MPQTFMGAARSRRPGTFGVIFALIAVLASACQGGPSDIAGGGG
MUL_3661|M.ulcerans_Agy99 -------MPQTFMGAARSRRPGTFGVIFALIAVLASACQGGPSDIAGGGG
MAB_1652|M.abscessus_ATCC_1997 ----MIPSRSSARGSHRSSPKGLIAGALVVAAALTAACQGGPSDVPGGGR
Mflv_2678|M.gilvum_PYR-GCK -------MLNPVRNLLKSPPRWRTAAALAVTTTLLAACGGGASDVAGDSG
Mvan_3875|M.vanbaalenii_PYR-1 -----------MRKILKSTRRWRTAAALTLSAAVLAACGGGASDVVGEEG
MSMEG_4533|M.smegmatis_MC2_155 ---------MPTTEKLTKFKFWRTATALAATGILAVGCGGGASDVAGDDG
TH_1447|M.thermoresistible__bu ----MSGQKSPRPARSLRRRGARTLSVLAAGALLLAGCGGGASDVPG--G
. : .* **.** *
MLBr_00615|M.leprae_Br4923 TAHA--HTSIALVAYSAPGPGWGKVIPAFNDARSGDGVQVVTSYGASGDQ
MAV_1782|M.avium_104 PADA--HTSITLVAYSVPEPGWSKIIPAFNASDEGKGIQVVTSYGASGDQ
Mb2422c|M.bovis_AF2122/97 PDRA--HTSITLVAYAVPEPGWSAVIPAFNASEQGRGVQVITSYGASADQ
Rv2400c|M.tuberculosis_H37Rv PDRA--HTSITLVAYAVPEPGWSAVIPAFNASEQGRGVQVITSYGASADQ
MMAR_3718|M.marinum_M PTDA--HTSITLVAYSAPEPGWSTVIPAFNASEEGKDVQVITSYGASADQ
MUL_3661|M.ulcerans_Agy99 PTDA--HTSITLVAYSAPEPGWSTVIPAFNASEEGKDVQVITSYGASADQ
MAB_1652|M.abscessus_ATCC_1997 GGDA--DTTLTLVAYAVPEPGFREIIPAFNATEAGKGIQITQSYGASGDQ
Mflv_2678|M.gilvum_PYR-GCK GSGS-AETTLTLVAFAVPEPGWSKAAPAFSATEEGEGVEVTASYGASGDQ
Mvan_3875|M.vanbaalenii_PYR-1 GNSD-AETTLTLVAFAVPEPGWSKVSPAFAATEEGKGVAVTGSYGASGDQ
MSMEG_4533|M.smegmatis_MC2_155 GADANAETTLTLVAYAVPEPGWSKIIPAFTATDEGKGVAVRTSFGASGDQ
TH_1447|M.thermoresistible__bu GGDADADTTLTLVAYAVPEPGWSKVIPAFAATEEGTGVQVRASYGASGDQ
.*:::***::.* **: *** : * .: : *:***.**
MLBr_00615|M.leprae_Br4923 SRGVVDGKPADIVNFSVETDITRLVKVGKVSKDWDTDATKGIPFGSVVTL
MAV_1782|M.avium_104 SRGVVDGKPADVVNFSVEPDIARLVKAGKVAKDWNTDATKGIPFGSVVTL
Mb2422c|M.bovis_AF2122/97 SRGVADGKPADLVNFSVEPDIARLVKAGKVDKDWDADATKGIPFGSVVTF
Rv2400c|M.tuberculosis_H37Rv SRGVADGKPADLVNFSVEPDIARLVKAGKVDKDWDADATKGIPFGSVVTF
MMAR_3718|M.marinum_M SRGVADGKPADLVNFSVEPDIARLVRAGKVAKDWDADATRGIPFESVVTL
MUL_3661|M.ulcerans_Agy99 SRGVADGKPADLVNFSVEPDIARLVRAGKVAKDWDAAATRGIPFESVVTL
MAB_1652|M.abscessus_ATCC_1997 SRGVEGGKPADIVNFSVEPDITRLVKAKKVSADWDKDAFGGIPFGSVVTL
Mflv_2678|M.gilvum_PYR-GCK SRSVESGKPADVVNFSVEPDITRLVKAGKVDENWNAGPNKGIAFGSIVTF
Mvan_3875|M.vanbaalenii_PYR-1 SRAVESGKPADIVNFSVEPDITRLVKAGKVDENWNAGPNKGIAFGSVVSF
MSMEG_4533|M.smegmatis_MC2_155 SRAVVDGKPADIVNFSVEPDVTRLVKAGKVAEDWNAGATKGIPFGSVVSL
TH_1447|M.thermoresistible__bu SRGVESGKPADLVNFSVEPDITRLVEAGKVAEGWNANATKGIPFGSVVTF
**.* .*****:******.*::***.. ** .*: . **.* *:*::
MLBr_00615|M.leprae_Br4923 VVRTGNPKNIKDWDDLVRPGVEVIMPNPLSSGSAKWNLLAPYAAKSEGCR
MAV_1782|M.avium_104 VVRKGNPKHIKDWDDLLRPGVEVITPSPLSSGSAKWNLLAPYAVKSEGGA
Mb2422c|M.bovis_AF2122/97 VVRAGNPKNIRDWDDLLRPGIEVITPSPLSSGSAKWNLLAPYAAKSDGGR
Rv2400c|M.tuberculosis_H37Rv VVRAGNPKNIRDWDDLLRPGIEVITPSPLSSGSAKWNLLAPYAAKSDGGR
MMAR_3718|M.marinum_M VVREGNPKNIRDWDDLLRPGVEVITPSPLSSGSAKWNLLAPYAVKSEGGR
MUL_3661|M.ulcerans_Agy99 VVREGNPKNIRNWDDLLRPGVEVITPSPLSSGSAKWNLLAPYAVKSEGGR
MAB_1652|M.abscessus_ATCC_1997 VVRKGNPKHVKDWDDLLQPGLEVISPSPLSSGSAKWNLLAPYAAKSEGGK
Mflv_2678|M.gilvum_PYR-GCK AVRPGNPKNIRTWDDLLQPGIEVITPSPLSSGAAKWNLLAPYAYASNGGQ
Mvan_3875|M.vanbaalenii_PYR-1 AVRPGNPKNIRTWDDLLQPGIEVITPSPLSSGAAKWNLLAPYAYASNGGK
MSMEG_4533|M.smegmatis_MC2_155 VVRQGNPKGIKDWDDLLQPGLEVVTPSPLSSGSAKWNLLAPYAAKSNGGQ
TH_1447|M.thermoresistible__bu MVREGNPKNIRDWDDLLRPDVEVITPSPLSSGSAKWNLLAPYAVKSAGGQ
** **** :: ****::*.:**: *.*****:********** * *
MLBr_00615|M.leprae_Br4923 NSQAGIDFVNRLVAEHVKLRLGSAREATDAFVQGSGDVLISYENEAIAAE
MAV_1782|M.avium_104 HGDAGVDFIRKLVTEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATE
Mb2422c|M.bovis_AF2122/97 NNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATE
Rv2400c|M.tuberculosis_H37Rv NNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATE
MMAR_3718|M.marinum_M NSQAGIDFVSRLVREHVKLRPGSGREATDVFVQGSGDVLISYENEAIATE
MUL_3661|M.ulcerans_Agy99 NSQAGIDFVSRLVREHVKLRPGSGREAIDVFVQGSGDVLISYENEAIATE
MAB_1652|M.abscessus_ATCC_1997 NPQAGLDFVSKLVREHVKMRPGSGREATEVFVQGSGDVLISYENEAIFTE
Mflv_2678|M.gilvum_PYR-GCK NPEAGIEFVNKLVTEHVKLRPGSGREATDVFRQGSGDVLLAYENEALNFD
Mvan_3875|M.vanbaalenii_PYR-1 DPQAGIDFVNKLVTEHVKLRPGSGREATDVFRQGSGDVLLAYENEALNFD
MSMEG_4533|M.smegmatis_MC2_155 DPEAGIDFVNKLVTEHVKTRPGSGREATDVFLQGTGDVLISYENEAIYVE
TH_1447|M.thermoresistible__bu DRQAGLDYVTRLVNEHIKLRPGSGREATDVFLQGSGDVLLAYENEAINAR
. :**:::: ** **:* * **.*** :.* **:****::*****:
MLBr_00615|M.leprae_Br4923 RQGKPVEHINPPVTFKIENPLAVVSTSAHLEVATAFKNFQYTTAAQGLWA
MAV_1782|M.avium_104 RAGKPVEHLNLAQTFKIDNPVAVVNTSPHLQAAVAFKNFQYTAAAQKVWA
Mb2422c|M.bovis_AF2122/97 RAGKPVQHVTPPQTFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWA
Rv2400c|M.tuberculosis_H37Rv RAGKPVQHVTPPQTFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWA
MMAR_3718|M.marinum_M RQGKRVQHVTPPQSFQIENPLAVVTTTAHLATATAFKNFQYTVEAQRLWA
MUL_3661|M.ulcerans_Agy99 RQGKRVQHVTPPQSFQIENPLAVVTTTAHLATATAFKNFQYTVEAQRLWA
MAB_1652|M.abscessus_ATCC_1997 SLGKPIEHVNVPITFKIENPVAVVSESLHVKKATEFKNFLYTPEAQRIWA
Mflv_2678|M.gilvum_PYR-GCK -----LEHVNPAQTFKIENPTAVVNTSRHLDKAQAFVDFQFTPEGQKLWA
Mvan_3875|M.vanbaalenii_PYR-1 -----LEHVNPAQTFKIENPTAVVNTSQHPDQAQAFVNFQFTPEAQKLWA
MSMEG_4533|M.smegmatis_MC2_155 RQGKPVEHVNPPQTFKIENPVAVVNTTSHSEAANALKNFVFTPEGQKIWA
TH_1447|M.thermoresistible__bu RQGHRFDYLTPPQTFKIENPVAVVTTSRHLDKATAFVNFQYTPEAQRLWA
.:::. . :*:*:** *** : * * : :* :* .* :**
MLBr_00615|M.leprae_Br4923 QAGFRPVDPAVSADFSDQFPAPVKLWTIADLGGWSTVDPQLFDKNTGSIT
MAV_1782|M.avium_104 QAGFRPVDPAVAADFRDQYPVPAKLWTIADLGGWSAADPQLFDKNTGSIT
Mb2422c|M.bovis_AF2122/97 QAGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSIT
Rv2400c|M.tuberculosis_H37Rv QAGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSIT
MMAR_3718|M.marinum_M QAGFRPVDPAVVAEFRDQFPLPEKLWTIADLGGWDTVDPQLFDKGTGSIT
MUL_3661|M.ulcerans_Agy99 QAGFRPVDPAVVVEFRDQFPLPEKLWTIADLGGWDTVDPQLFDKGTGSIT
MAB_1652|M.abscessus_ATCC_1997 KTGFRPVDPGVAAEFASSFPVPSKLWTIKDLGGWKSVDKELFDKNDGSIT
Mflv_2678|M.gilvum_PYR-GCK EAGFRPVDPAVQAEFADKFPAPEKLWTIDDLGGWKNVDTQLFDKDNGTIT
Mvan_3875|M.vanbaalenii_PYR-1 EANFRPVDPAVLAEFADKFPTPEKLWTIEDLGGWSKVDSELFDKENGTIT
MSMEG_4533|M.smegmatis_MC2_155 EAGFRPVDPAVAAEFAADFPAPEKLWTVDDLGGWDAVDPSLFDKDNGTIT
TH_1447|M.thermoresistible__bu EAGFRPVDPAVAADFADQFPAPEKLWTIDDLGGWEKVDVELFNKDGGAIT
::.******.* .:* :* * ****: ***** .* .**:* *:**
MLBr_00615|M.leprae_Br4923 KVYMQATG
MAV_1782|M.avium_104 KIYTQATG
Mb2422c|M.bovis_AF2122/97 KIYLRATG
Rv2400c|M.tuberculosis_H37Rv KIYLRATG
MMAR_3718|M.marinum_M NIYMQATG
MUL_3661|M.ulcerans_Agy99 NIYMQATG
MAB_1652|M.abscessus_ATCC_1997 KIYKEATG
Mflv_2678|M.gilvum_PYR-GCK KIYKQATG
Mvan_3875|M.vanbaalenii_PYR-1 KIYKQATG
MSMEG_4533|M.smegmatis_MC2_155 KIYKQATG
TH_1447|M.thermoresistible__bu KIYIQATG
::* .***