For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SQPSKKTPPTTESLSTVGSLEAPATRPSRRVKIWATAGGVILAFQIYVWIRWITGPYFERVDPGPTDPPT FMKVALMLWQIGSPVLFPVAIWWFIIRPWRRERRITLDGMIMVSTGLFFFQDPLLNYINTWCTYNAWAFN MGSWAPHVPGWMSPEKPGAQVAEPLGINVSGYAYGVLLCTILGCWVMRKAQQRWPNLGTKGLIGVAFAFG FVFDFVMEGLILMPLGMYTFPGAIQALSINAGTYYQWPIYEGLMWGGVQAALCCLRFFTDDRGRTVVERG LDNVRGGFAKQQFVRFLAIFAAISASFFTFYIVPAQFMATHADPWPEDVQKRSYFTSGLCGDGTDRPCPD PSLPIPTKHSGYINTDGDLVLPDGVQMPAVIPHERSE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2459 | - | - | 100% (388) | hypothetical protein Mflv_2459 |
M. gilvum PYR-GCK | Mflv_4153 | - | 3e-11 | 28.36% (268) | hypothetical protein Mflv_4153 |
M. gilvum PYR-GCK | Mflv_4146 | - | 1e-06 | 25.74% (136) | hypothetical protein Mflv_4146 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2656 | - | 9e-41 | 29.03% (341) | hypothetical protein MAV_2656 |
M. smegmatis MC2 155 | MSMEG_6808 | - | 0.0 | 91.45% (386) | hypothetical protein MSMEG_6808 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4195 | - | 1e-155 | 63.68% (380) | hypothetical protein Mvan_4195 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2459|M.gilvum_PYR-GCK ---------------------MSQPSKKTPPTTESLSTVGSLEAP-ATRP MSMEG_6808|M.smegmatis_MC2_155 ---------------------MSELSDKKAAATESLRSVGRLDAPPAAKP Mvan_4195|M.vanbaalenii_PYR-1 MQPAGSAAPPTASTIVKGKPIMSDLSRK-PAVTESVSGTADLGKQ-GPSQ MAV_2656|M.avium_104 ---------------------MTDLKSSSRAEPSAIE-------PPQIKT *:: . . . ..:: Mflv_2459|M.gilvum_PYR-GCK SRRVKIWATAGGVILAFQIYVWIRWITGPYFERVDPGPTDPPTFMKVALM MSMEG_6808|M.smegmatis_MC2_155 SRRVKIWATAGGIILAFQIYVWIRWITGPYFTRVDPGPTDPPTFMKIALM Mvan_4195|M.vanbaalenii_PYR-1 SNAFKVWATVGAVFLAYTLYVFIRWVSGPYFEPVAGGPSEPPLYMKIPLM MAV_2656|M.avium_104 IRPVLFWSSLGAVCVIIAAYVYISWIASGNATRVNPGPDPIPAATHWAMT . . .*:: *.: : **:* *::. * ** * : .: Mflv_2459|M.gilvum_PYR-GCK LWQIGSPVLFPVAIWWFIIRPWRRERRITLDGMIMVSTGLFFFQDPLLNY MSMEG_6808|M.smegmatis_MC2_155 MWQIGSPVLFPVAIWWFIIRPWRRERRITLDGMIMVSTGLFFFQDPLLNY Mvan_4195|M.vanbaalenii_PYR-1 ANAVVLWIGLPFALWFFLIRPWVREKRITLDGMLLVSMGLMMFQDPMLNY MAV_2656|M.avium_104 AFQIACPILAMAAIG-YVIRKSVRERQLCVEAAIVIGSAIAWWHDPLINW : : *: ::** **::: ::. :::. .: ::**::*: Mflv_2459|M.gilvum_PYR-GCK INTWCTYNAWAFNMGSWAPHVPGWMSPEKPGAQVAEPLGINVSGYAYGVL MSMEG_6808|M.smegmatis_MC2_155 INTWCTYNAWAFNMGSWAPHVPGWMSPEKPGAQVAEPLGINVSGYAYGVL Mvan_4195|M.vanbaalenii_PYR-1 YSTWCTYNAWLFNQGSWAPHIPGWVAHEEPGHTVPEPLLTNIPGYMYGVL MAV_2656|M.avium_104 FQPALFYNAGLLNFGNWTQNIPGWLSPD--GRLMAEPVLMIGMIYIWMPL .. *** :* *.*: ::***:: : * :.**: * : * Mflv_2459|M.gilvum_PYR-GCK LCTILGCWVMRKAQQRWPNLGTKGLIGVAFAFGFVFDFVMEGLILMPLGM MSMEG_6808|M.smegmatis_MC2_155 LCTILGCWIMRKAQQRWPNLGTKGLIGVAFAWGFVFDFVMEGLVLMPLGM Mvan_4195|M.vanbaalenii_PYR-1 LLTIVGCALMRKIKNRWPGISNLRLVLVTYAVAIVFDFIMEGLILLPIGF MAV_2656|M.avium_104 AMGSIARWTMGRARHRWPTLGPVRTFCTGWLAVYVIEFPLEIFAVR-HGL :. * : ::*** :. . . : *::* :* : : *: Mflv_2459|M.gilvum_PYR-GCK YTFPGAIQALSINAGTYYQWPIYEGLMWGGVQAALCCLRFFTDDRGRTVV MSMEG_6808|M.smegmatis_MC2_155 YTFPGAIQSLSINAGTYYQWPIYEGLMWGGVQAALCCLRFFTDDRGRTVV Mvan_4195|M.vanbaalenii_PYR-1 YSYPGAIQELSINAGTYYQYPIYEGFMWGGVQAALCCLRFFTDDRGRTVV MAV_2656|M.avium_104 LGYPASIPGVTLWAGQTMQIPLYGPILWSLVLSSSGALMFFRNRAGQIRV :*.:* ::: ** * *:* ::*. * :: .* ** : *: * Mflv_2459|M.gilvum_PYR-GCK ERGLDNV-RGGFAKQQFVRFLAIFAAISASFFTFYIVPAQFMATHADPWP MSMEG_6808|M.smegmatis_MC2_155 EKGLDNV-RGGFAKQQLVRFLAIFAAISASFFTFYIVPAQFMSTHADPWP Mvan_4195|M.vanbaalenii_PYR-1 ERGLDRV-RGGFVKQQFVRFLAIFGGVSACFFLFYNVPATWLGMQGDPWP MAV_2656|M.avium_104 EAGVETLGWAGPWARGLLRVLAVTGFLHVVAIGVYDLPVNFAGLYAGPTQ * *:: : .* : ::*.**: . : . : .* :*. : . ..* Mflv_2459|M.gilvum_PYR-GCK EDVQKRSYFTSGLCGDGTDRPCPDPSLPIPTKHSGYINTDGDLVLPDGVQ MSMEG_6808|M.smegmatis_MC2_155 EDVQKRSYFTSGICGDGTDRPCPHPDLPIPTKHSGYINVDGELVLPEGVE Mvan_4195|M.vanbaalenii_PYR-1 EDVQKRSYFNPGICGEGTDRPCPNPDLPLPTKHSGYVNHDGELVLPEGVE MAV_2656|M.avium_104 TYP---SYLRTQYCGPDTPRACPDG-----TRFDDR-------------- **: . ** .* *.**. *:... Mflv_2459|M.gilvum_PYR-GCK MPAVIPHERSE----- MSMEG_6808|M.smegmatis_MC2_155 MPAVVPHE-------- Mvan_4195|M.vanbaalenii_PYR-1 IPPVVPIQRPNSDDSQ MAV_2656|M.avium_104 ----------------