For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTVADPPVTMRQVIADAAETLAAAGVGSPRVDAELLAAHVAGTDRGLVAFVEPDAAFLSRYRDLTARRAA RVPLQHLTGTAAFGPVVVDVGPGVFIPRPETESLLEWALAQPLSGSARIVDLCTGSGALALALAQGFPGA TVFAVDDSDDALVYTRRNTAGTAVHVVRADVTDAGLLTELDRSVDLLVSNPPYIPDAAELEPEVAEHDPA HALYGGADGMAVIEHLAGVAARLLRPGGRCAVEHDDSTSQATVEVFVRAGGFTEVTARHDLTGRPRFVTA VRNGERVAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2308 | - | - | 100% (289) | HemK family modification methylase |
M. gilvum PYR-GCK | Mflv_1039 | - | 2e-14 | 30.43% (184) | putative methylase |
M. gilvum PYR-GCK | Mflv_3729 | - | 1e-07 | 36.84% (133) | Fmu (Sun) domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1332 | hemK | 4e-90 | 62.06% (282) | hypothetical protein Mb1332 |
M. tuberculosis H37Rv | Rv1300 | hemK | 3e-90 | 62.06% (282) | hypothetical protein Rv1300 |
M. leprae Br4923 | MLBr_01135 | - | 8e-84 | 57.14% (280) | putative protoporphyrinogen oxidase |
M. abscessus ATCC 19977 | MAB_1443 | - | 4e-87 | 60.07% (273) | modification methylase HemK |
M. marinum M | MMAR_4097 | hemK | 1e-88 | 60.87% (276) | modification methylase HemK |
M. avium 104 | MAV_1517 | - | 2e-87 | 59.04% (293) | modification methylase, HemK family protein |
M. smegmatis MC2 155 | MSMEG_4949 | - | 2e-99 | 67.15% (274) | modification methylase, HemK family protein |
M. thermoresistible (build 8) | TH_1566 | hemK | 6e-87 | 60.70% (285) | PROBABLE HEMK PROTEIN HOMOLOG HEMK |
M. ulcerans Agy99 | MUL_3964 | hemK | 3e-88 | 59.78% (276) | modification methylase HemK |
M. vanbaalenii PYR-1 | Mvan_4338 | - | 1e-111 | 73.90% (272) | HemK family modification methylase |
CLUSTAL 2.0.9 multiple sequence alignment Mb1332|M.bovis_AF2122/97 MTSAPATMRWGNLPLAGESGTMTLRQAIDLAAALLAEAGVDSARCDAEQL Rv1300|M.tuberculosis_H37Rv MTSAPATMRWGNLPLAGESGTMTLRQAIDLAAALLAEAGVDSARCDAEQL MLBr_01135|M.leprae_Br4923 -------------------MMIRLRRAIDSAVTQLEEAGIGSARCDAEQL MMAR_4097|M.marinum_M --------------------MTSLRHAIDSAAALLAEAGIDSARGDAEWL MUL_3964|M.ulcerans_Agy99 --------------------MTSLRHAIDSAAALLAEAGIDSARGDAEWL MAV_1517|M.avium_104 --------------MSSGTIRLSLRRAIDDATATLAEAGIASARWDAEQL Mflv_2308|M.gilvum_PYR-GCK --------------MTVADPPVTMRQVIADAAETLAAAGVGSPRVDAELL Mvan_4338|M.vanbaalenii_PYR-1 --------------------------MIDDAAAVLAAAGVGSPRVDAELL MSMEG_4949|M.smegmatis_MC2_155 --------------------MTRLRTAIEAATATLAAAGVATPRIDAELL TH_1566|M.thermoresistible__bu --------------------MTGLRQVIDAAARELTAAGVNSPRADALEL MAB_1443|M.abscessus_ATCC_1997 --------------------MSRLRELLAEAAESLSRAGVSSPQVDAEEL : *. * **: :.: ** * Mb1332|M.bovis_AF2122/97 AAHLAGTDRGRLPLFEPPGD-EFFGRYRDIVTARARRVPLQHLIGTVSFG Rv1300|M.tuberculosis_H37Rv AAHLAGTDRGRLPLFEPPGD-EFFGRYRDIVTARARRVPLQHLIGTVSFG MLBr_01135|M.leprae_Br4923 AAHLAGTDRGRLALLDTPGE-EFFRRYSDAVAARSRRVPLQHLIGTVSFG MMAR_4097|M.marinum_M AAHLTGTDRGLLYLPGEPLDTDALGQYRDMVTARSRRVPLQHLIGTVQFG MUL_3964|M.ulcerans_Agy99 AAHLTGTDRGLLYLPDDPLDSDALGQYQDMVTARSRRVPLQHLIGTVQFG MAV_1517|M.avium_104 AAHLAGVDRGRLGLLESPGQ-EFFQRYRDAVLARARRVPLQHLLGTAAFG Mflv_2308|M.gilvum_PYR-GCK AAHVAGTDRGLVAFVE-PD-AAFLSRYRDLTARRAARVPLQHLTGTAAFG Mvan_4338|M.vanbaalenii_PYR-1 AAHVTGTERGRVAFVQ-PD-DAFAARYRELVTARAERVPLQHLTGTAAFG MSMEG_4949|M.smegmatis_MC2_155 AAHSLGVDRGRLMFVDDPD-PEALAAFEHLVAARAKRIPLQHLVGTAAFG TH_1566|M.thermoresistible__bu AAHAAGVDRGRLLLLDGPDDASFLARYRELVAARARRVPLQHLTGSAAFG MAB_1443|M.abscessus_ATCC_1997 AAHLLGVSRTQLRFTEAAA--DFPGRYRDLVAQRARRIPLQHLVGSAAFG *** *..* : : . : . . *: *:***** *:. ** Mb1332|M.bovis_AF2122/97 PVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPLIVDACTGSGALAV Rv1300|M.tuberculosis_H37Rv PVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPLIVDACTGSGALAV MLBr_01135|M.leprae_Br4923 PVVLHVGPDVFIPRPETEAILAWVMAQRLP---ERPVIVDACTGSGALAV MMAR_4097|M.marinum_M PVELQVGPGVFVPRPETEAVLEWAGAQQLS---EYPVIVDLCTGSGALAI MUL_3964|M.ulcerans_Agy99 PVELQVGPGVFVPRPETEAVLEWAGAQQLS---EDPVIVDLCTGSGALAV MAV_1517|M.avium_104 PVLLHVGPGVFVPRPETEALLEWATAQQLP---PRPVIVDLCTGSGALAV Mflv_2308|M.gilvum_PYR-GCK PVVVDVGPGVFIPRPETESLLEWALAQPLS---GSARIVDLCTGSGALAL Mvan_4338|M.vanbaalenii_PYR-1 PVTVQVGPGVFVPRPETESVLEWAVAQPLP---ARPRIVDLCTGSGALAL MSMEG_4949|M.smegmatis_MC2_155 PLTLEVGPGVFIPRPETESLLEWAVAQQLP---RDAVIVDLCTGTGALAL TH_1566|M.thermoresistible__bu PVTLSVGPGVFIPRPETEALLDWAVRHALPDLGPRPVIADLCTGSGALAL MAB_1443|M.abscessus_ATCC_1997 PIEVRVGPGVFIPRPETESLYAWAAGQLAP----HATVVELCAGSAALAI *: : ***.**:******:: *. : . . :.: *:*:.***: Mb1332|M.bovis_AF2122/97 ALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVT----T Rv1300|M.tuberculosis_H37Rv ALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVT----T MLBr_01135|M.leprae_Br4923 ALAHHRP----AARVIGIDDSDSALDYARRNAEGTAVECVRADVT----T MMAR_4097|M.marinum_M ALADRWP----AARILGVDDSGAALEYAQRNSVGTKVELVRADVT----T MUL_3964|M.ulcerans_Agy99 ALANRWP----TARILGVDDSAAALEYAHRNSVGTKVELVRADVT----T MAV_1517|M.avium_104 ALAHHRAGRGLPARIVGVDNSDAALEYARRNAAGTTVELVRADVIELARV Mflv_2308|M.gilvum_PYR-GCK ALAQGFP----GATVFAVDDSDDALVYTRRNTAGTAVHVVRADVT----D Mvan_4338|M.vanbaalenii_PYR-1 ALAVAFP----AAQVTAVDDSEAALDYARGNVADSSVQLVRADVT----A MSMEG_4949|M.smegmatis_MC2_155 ALAQHRP----QARVIAVEDSPAALEYARCNAAGTSVEVLAADVT----A TH_1566|M.thermoresistible__bu ALHHHRP----DARIIAVDISDAALEYARRNTAGTGIEVLRTDVT----A MAB_1443|M.abscessus_ATCC_1997 ALAQHEP----TARVTAIEVDVDALIYTRRNAEGTGVEVVQADVT----S ** . * : .:: . ** *:: * .: :. : :** Mb1332|M.bovis_AF2122/97 PCLLPELDGQVDLMVSNPPYIPD-----AAVLEPEVAQHDPHHALFGGPD Rv1300|M.tuberculosis_H37Rv PRLLPELDGQVDLMVSNPPYIPD-----AAVLEPEVAQHDPHHALFGGPD MLBr_01135|M.leprae_Br4923 PALLPELDGCVDLFVANPPYVPDDPV-VQSILEPEVTQYDPRHAVFGGPD MMAR_4097|M.marinum_M PGLMPELDGQVDLVVTNPPYIPD-----GAVLEPEVAQHDPHRALFGGPN MUL_3964|M.ulcerans_Agy99 PGLMPELDGQVDLVVTNPPYIPD-----GAVLEPEVAQHDPHRALFGGPN MAV_1517|M.avium_104 PGSAPDLDGRVDLVVANPPYVPD-----GAVLEPEVAQHDPHHAVFGGPD Mflv_2308|M.gilvum_PYR-GCK AGLLTELDRSVDLLVSNPPYIPDA-----AELEPEVAEHDPAHALYGGAD Mvan_4338|M.vanbaalenii_PYR-1 PGLLADLDGSVDLLVANPPYIPAG-----ALLEPEVAQYDPAHALFGGAD MSMEG_4949|M.smegmatis_MC2_155 PDLLPELDGAVDLVVSNPPYIPEG-----AELDPEVADHDPAHALFGGPD TH_1566|M.thermoresistible__bu PELLAGLAGQVDLIVANPPYIPAPSVPAESGLEPEVARHDPPDALFGGPD MAB_1443|M.abscessus_ATCC_1997 PDLLTELNGAVDLIVANPPYIPQD-----TELEPEVARHDPPQALFAGAD . . * ***.*:****:* : *:***: :** *::.*.: Mb1332|M.bovis_AF2122/97 GMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVDLVSSTKLFVDVQAR Rv1300|M.tuberculosis_H37Rv GMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVDLVSSTKLFVDVQAR MLBr_01135|M.leprae_Br4923 GMALTADIVGLAGRWLRPGGLFAVEHDDSTSVPTLDLVYRTDLFDDVLTH MMAR_4097|M.marinum_M GMAVIPHVVRLAGRWLRPGGRFAVEHDDTTARQTVECIESEGVFEDIVAR MUL_3964|M.ulcerans_Agy99 GMAVIPHVVRLAGRWLRPGGRFAVEHDDTTARQTVKCIESAGVFEDIVAR MAV_1517|M.avium_104 GLAVIAPVVELAGRWLRPGGLIGIEHDDTTSHQTVELFDRTGLFDDVRAH Mflv_2308|M.gilvum_PYR-GCK GMAVIEHLAGVAARLLRPGGRCAVEHDDSTSQATVEVFVRAGGFTEVTAR Mvan_4338|M.vanbaalenii_PYR-1 GMSVIGPIVDAAARLLRPGGRCAVEHDDTTSEQTVAAFTRDGGFVDVTAR MSMEG_4949|M.smegmatis_MC2_155 GMAVIRPIVALAARWLRDGGKCAVEHDDTTSARTVEAFTHDGNFTDVTAR TH_1566|M.thermoresistible__bu GMAVITAIVDRAGVLLRPGGRCAIEHDDTTSAETVTAFTGTGRFVDVVAR MAB_1443|M.abscessus_ATCC_1997 GLAIIAPIVIAAGRLLAPGGAIGIEHDDSKGGRTRELFTACDFFDEVVQR *::: :. *. * ** .:****:.. * . * :: : Mb1332|M.bovis_AF2122/97 KDLAGRPRFVTAMRWGHLPLAGENGAIDPRQRRCRAKR Rv1300|M.tuberculosis_H37Rv KDLAGRPRFVTAMRWGHLPLAGENGAIDPRQRRCRAKR MLBr_01135|M.leprae_Br4923 RDLAGRPRFVTARRRESWSA------------------ MMAR_4097|M.marinum_M QDLAGRPRFVTAVKRLVR-------------------- MUL_3964|M.ulcerans_Agy99 QDLAGRPRFVTAVKRLVR-------------------- MAV_1517|M.avium_104 RDLTGRPRFVTARRRSGADVSRRDDAERSDEEERR--- Mflv_2308|M.gilvum_PYR-GCK HDLTGRPRFVTAVRNGERVAR----------------- Mvan_4338|M.vanbaalenii_PYR-1 HDLAGRPRFVTAVRAG---------------------- MSMEG_4949|M.smegmatis_MC2_155 HDLTGRPRFVTATRIARS-------------------- TH_1566|M.thermoresistible__bu RDLAGRPRFVTATRLGRGHQDSGHQEGLTR-------- MAB_1443|M.abscessus_ATCC_1997 HDLTGRPRFVTARRKIAAS------------------- :**:******** :