For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTAYDVGVLILRVVLGLTMAAHGYNKFFGKGGLKGTAGWFDSMGMKPGMFHARIAASTEMAAGIGLAVGL LTPIPAAGFVALMLVAAWTVHKDNGFFIVKEGWEYNLVLAASAVGIATIGAGKLSLDHLLFSGSQFYDYL HGWWGLAIALVLGLAGGIGQLAIFYRPPVSQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_2112 | - | - | 100% (171) | DoxX family protein |
| M. gilvum PYR-GCK | Mflv_4241 | - | 1e-14 | 32.93% (167) | DoxX family protein |
| M. gilvum PYR-GCK | Mflv_2130 | - | 2e-07 | 28.91% (128) | DoxX family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3030c | - | 4e-15 | 32.53% (166) | hypothetical protein Mb3030c |
| M. tuberculosis H37Rv | Rv3005c | - | 4e-15 | 32.53% (166) | hypothetical protein Rv3005c |
| M. leprae Br4923 | MLBr_00956 | - | 3e-64 | 67.25% (171) | putative integral membrane protein |
| M. abscessus ATCC 19977 | MAB_3332c | - | 4e-12 | 31.54% (130) | hypothetical protein MAB_3332c |
| M. marinum M | MMAR_4330 | - | 2e-67 | 71.35% (171) | hypothetical protein MMAR_4330 |
| M. avium 104 | MAV_1260 | - | 1e-70 | 74.27% (171) | DoxX subfamily protein, putative |
| M. smegmatis MC2 155 | MSMEG_5203 | - | 4e-81 | 82.63% (167) | DoxX subfamily protein, putative |
| M. thermoresistible (build 8) | TH_0494 | - | 9e-81 | 82.74% (168) | DoxX subfamily protein, putative |
| M. ulcerans Agy99 | MUL_0140 | - | 5e-67 | 72.02% (168) | hypothetical protein MUL_0140 |
| M. vanbaalenii PYR-1 | Mvan_4592 | - | 8e-89 | 91.23% (171) | DoxX family protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2112|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4592|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5203|M.smegmatis_MC2_155 --------------------------------------------------
TH_0494|M.thermoresistible__bu --------------------------------------------------
MLBr_00956|M.leprae_Br4923 --------------------------------------------------
MAV_1260|M.avium_104 --------------------------------------------------
MMAR_4330|M.marinum_M --------------------------------------------------
MUL_0140|M.ulcerans_Agy99 --------------------------------------------------
Mb3030c|M.bovis_AF2122/97 MTSSNDS--HWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGT
Rv3005c|M.tuberculosis_H37Rv MTSSNDS--HWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFGSGT
MAB_3332c|M.abscessus_ATCC_199 MTGHSDDPQVWRKPPE-------------LVDPEDDVPSATYGGDF---E
Mflv_2112|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4592|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5203|M.smegmatis_MC2_155 --------------------------------------------------
TH_0494|M.thermoresistible__bu --------------------------------------------------
MLBr_00956|M.leprae_Br4923 --------------------------------------------------
MAV_1260|M.avium_104 --------------------------------------------------
MMAR_4330|M.marinum_M --------------------------------------------------
MUL_0140|M.ulcerans_Agy99 --------------------------------------------------
Mb3030c|M.bovis_AF2122/97 TTVIPPYDAA--SSGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDM
Rv3005c|M.tuberculosis_H37Rv TTVIPPYDAA--SSGVGNSGYSLIEAAEPLPYVQPQPGRQVPAGSAGIDM
MAB_3332c|M.abscessus_ATCC_199 TTAIPQYQAERLTSSHNVKEVGPLYDPAPLPYAEPAT-TQISAEAVHARH
Mflv_2112|M.gilvum_PYR-GCK -------------MTAYDVGVLILRVVLGLTMAAHGYNKFFG---KGGLK
Mvan_4592|M.vanbaalenii_PYR-1 -------------MTAYDVGVLILRVVLGLTMAAHGYNKFFG---KGGLK
MSMEG_5203|M.smegmatis_MC2_155 -----------MAESAFDTAILILRVVLGLTMAAHGYNKFFG---GGRIP
TH_0494|M.thermoresistible__bu -------------MEAYDFGLLILRVVLGLTMAAHGYNKFFG---GGRIP
MLBr_00956|M.leprae_Br4923 -------------MTSYDIGLLILRLVLGLTLAAHGYNKFFC---GGRIP
MAV_1260|M.avium_104 -------------MTPYDVGLLILRLVLGVTLAAHGYNKFFG---GGRIP
MMAR_4330|M.marinum_M -------------MAPYDVGLLILRLVLGLTMAAHGFNKFFG---GGRIP
MUL_0140|M.ulcerans_Agy99 -------------MAPYDVGLLILRLVLGLTMAAHGFNKFFG---GGRIP
Mb3030c|M.bovis_AF2122/97 DD--DERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLA
Rv3005c|M.tuberculosis_H37Rv DD--DERVRAAGRRGTQNLGLLILRVGLGAVLIAHGLQKLFGWWDGQGLA
MAB_3332c|M.abscessus_ATCC_199 AAPWGTQDPAGDRRGTQDLGLLLLRVGVGAVLIAHGLRKVFGWWGGTGLS
. : .:*:**: :* .: *** .*.* :
Mflv_2112|M.gilvum_PYR-GCK GTAGWFDSMGMKPGMFHARIAASTEMAAGIGLAVGLLTPIPAAG----FV
Mvan_4592|M.vanbaalenii_PYR-1 GTAGWFDSMGMRPGMFHARIAATTEMAAGIGLAVGLLTPIPAAG----FV
MSMEG_5203|M.smegmatis_MC2_155 GTAGWFDSIGMKPGMFHARVAATTEIAAGLGLAVGLLTPIPAAG----FV
TH_0494|M.thermoresistible__bu GTAGWFESIGMKPGMLHARIAATAEIAAGLGLAVGLLTPVPAAG----FV
MLBr_00956|M.leprae_Br4923 GTARWFESIGMKPGTFHATVAATTEISAGLGLAAGLLTPIPAAG----FV
MAV_1260|M.avium_104 GTARWFESIGMKPGKFHATVAASTEMAAGLGLAAGLLTPIPAAG----FV
MMAR_4330|M.marinum_M GTARWFESIGMKPGKFHATVAAITEVSAGLGLAAGLLTPIPAAG----FV
MUL_0140|M.ulcerans_Agy99 GTARWFESIGMKPGKFHATVAAITEVSAGLGLAAGLLTPIPAAG----FV
Mb3030c|M.bovis_AF2122/97 GFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLI
Rv3005c|M.tuberculosis_H37Rv GFQNSLSDIGYQHAEILAYVSAGGEIVAGVLLVLGLFTPLAAAGALAFLI
MAB_3332c|M.abscessus_ATCC_199 GFEATLGDRGFKYADILTYVGVTAELGAGVLLVLGLLTPLAGAAALAFTV
* : . * : . : : :.. *: **: *. **:**:..*. :
Mflv_2112|M.gilvum_PYR-GCK ALMLVAAWTVHKDNGFFIVKEGWEYNLVLAASAVGIATIGAGKLSLDHLL
Mvan_4592|M.vanbaalenii_PYR-1 ALMLVAAWTVHKPNGFFIVKEGWEYNLVLAASAVGIATIGAGRLSLDYAL
MSMEG_5203|M.smegmatis_MC2_155 ALMLVAAWTVHRANGFFIVKEGWEYNLILAVAAIAIAGTGAGRFSLDHLL
TH_0494|M.thermoresistible__bu ALMLVAAWTVHRKNGFFIVKEGWEYNLVLAAAAVSVGATGAGKYSLDHLL
MLBr_00956|M.leprae_Br4923 SLMMVAAWMVHRPNGFFIVKEGWEYNLVLATGAVVVATLGAGRFSLDWLI
MAV_1260|M.avium_104 SLMLVAAWTVHRPNGFFIVKEGWEYNLVLAASAVVVATLGAGRLSLDWLV
MMAR_4330|M.marinum_M SLMFVAAWTVHRPNGFFIVKEGWEYNLVLALSAVAVATIGAGKLSLDWVI
MUL_0140|M.ulcerans_Agy99 SLMFVAAWTVHRPNGFFIVKEGWEYNLVLALSAVAVATIGAGKLSLDWVI
Mb3030c|M.bovis_AF2122/97 NGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAAR
Rv3005c|M.tuberculosis_H37Rv NGLLAGISAQHSRPVAYFLQDGHEYQITLVVMAVAVILSGPGRYGLDAAR
MAB_3332c|M.abscessus_ATCC_199 NVLLSDMVSDKANRYAIFWPEGHEFELLMIVAIVAVILVGPGRYGFDAGR
:: : : :* *::: : : : *.*: .:*
Mflv_2112|M.gilvum_PYR-GCK FSGSQFYDYLHGWWGLAIALVLGLAGGIGQLAIFYRPPVSQ---
Mvan_4592|M.vanbaalenii_PYR-1 FSGTGIYDLLHGWWGLLIAVVLGLAGGIGQLVIFYRPPAPQSAS
MSMEG_5203|M.smegmatis_MC2_155 FSGTGFYDYLYGWWGLAIAVVLGLAGGIGQLAIFYRPPAKTG--
TH_0494|M.thermoresistible__bu FSGAAFYDYLHGWWGLVIALGLGLIGGIGQLAIFYRPPAPAEQS
MLBr_00956|M.leprae_Br4923 FG----KNWFDSCDGLLISVLLGFAGALGQLLIFYRPPVKKTS-
MAV_1260|M.avium_104 FG----KNWMDGWNGLLISLLLGLAGAIGQLVIFYRPPAKQTG-
MMAR_4330|M.marinum_M FG----NNWLNGWPGLVASLGLGLAGAFGQLLIFYRPPARQAG-
MUL_0140|M.ulcerans_Agy99 FG----NNWLNGWPGLVASLGLGLAGAFGQLLIFYRPPARRAG-
Mb3030c|M.bovis_AF2122/97 GWAH------RPFIGSFVALLGGIAAGIAVWVLLNGANPLA---
Rv3005c|M.tuberculosis_H37Rv GWAH------RPFIGSFVALLGGIAAGIAVWVLLNGANPLA---
MAB_3332c|M.abscessus_ATCC_199 GWAR------RPFIGSFAAVVLGFGGAAAIWVFLNGTNPLA---
* :: *: .. . :: .